Scophthalmus maximus (turbot): 118301166
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Entry
118301166 CDS
T09850
Symbol
trpv1
Name
(RefSeq) transient receptor potential cation channel subfamily V member 1
KO
K05222
transient receptor potential cation channel subfamily V member 1
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
118301166 (trpv1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
smau04040
]
118301166 (trpv1)
Ion channels [BR:
smau04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
118301166 (trpv1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_5
Ank_3
Ion_trans
PKD_channel
Motif
Other DBs
NCBI-GeneID:
118301166
NCBI-ProteinID:
XP_035482298
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Position
2:complement(11258136..11270342)
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AA seq
769 aa
AA seq
DB search
MKKSEMFGFSLETDNRTEEEKKQQQKAARVAPMDTDYNEEMEETKPQIRFNLNFDKRIQG
KEQSDRKRESETFPIDRLFEAVASRDVRKLEGLHQYLHQNTKKLSDSLYQSYGKTALMKA
LLHLRDNENETVELLIDISEKLGDVQEFVNAAYTSSYYKGQTALHIAIERRSVAYVKLLV
SKGADVHAKACGKFFQPHDGPYFYFGELPLSLAACTNQADVVDFLMANEHQRADAKLTDS
QGNTVLHALVVVADNSEENTDMITSMYDRILKTSARLHPTLNLEDIENLKGLTPLKMAAR
TGKIGLFSHILKREFQDSDTKHLSRKFTEWVYGPVHSSLYDLSSVDSYRDGSVLEILIYS
CDIPNRHEMLETEPLSQLLDEKWKKFAGQMFFLNFLFYILYLIIFTAVAYNKRGGKPPFP
LERTTMGYLYVSGQLLTLLANIYFFFRGMIDMCRKCPNLKTLLIDGYYEILFLVQGALFL
VSAGLYLFGQEEYLGVMVLCLALSWVNLLYFSRGDRNMGIYSVMIQKMILSDILRFLFVY
IVFLFGFSAAVVTLLIEPPVRNDTQNAQKTRLFGSVNTGEECIKPTFTSISFTTLQLFKF
TIGMGDMEFSQGYHKYKEVFYVLLLSYIILTYILLLNMLIALMNRTVERITMKSSSIWRL
QRAVTILDMEKRLPSCLRRRFRCGVEKKLATALGEDRRWCFRVEEVNWNKWNINLGKINE
DPGSCDCLQQPASDSPLHRPNRGRSWRGFFTDGSRRRQTNQSTEMNTPV
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagtcagagatgttcggcttctccctggagacagacaatcggacggaggaggag
aagaagcagcagcaaaaagcggcaagggtggctcccatggacaccgattacaacgaggaa
atggaggaaaccaagccgcaaatcagattcaatctcaactttgacaaacgcattcaaggc
aaagagcagagcgacaggaagagagaaagcgagacctttcccattgacaggctctttgaa
gcagtggccagccgggacgtcaggaagctggagggcctgcaccagtacctgcaccagaac
acgaagaagctctctgactccctatatcagtcctacggtaaaaccgccctgatgaaagct
ctcctgcacctcagagacaacgagaacgagactgtggaattattaatcgacatctcggag
aagctgggcgacgttcaagagtttgtgaacgcagcctacaccagcagctattacaaaggc
cagacagctctccatatagccattgagaggaggagtgttgcctatgtgaaactactggtc
agtaaaggagcagatgtccacgccaaagcctgcgggaaattcttccagccacacgacggc
ccctacttttactttggcgagctgcccctgtctctggcagcctgcaccaaccaggctgac
gtggttgacttcctgatggcgaacgagcaccagcgggcagacgcaaagctgacggactcc
cagggcaacacggtgcttcacgccctggtggtggtggccgacaactcggaggagaacaca
gacatgatcaccagcatgtacgaccgcatcctcaagacgagcgcccgactgcatccgaca
ctgaatctggaggacatcgagaacctcaaggggctcacgccgctcaaaatggccgccagg
actggcaagatagggcttttctcacacatcctgaagcgggaattccaagacagcgacacc
aaacatttatctcgtaaattcaccgagtgggtttacgggcccgtccacagctccctgtac
gacctgtcctcggtggattcctacagggacggctcagttttggagatactgatctacagc
tgtgacattcccaaccgtcatgagatgctcgagacggagcctctgagccaactgctggac
gagaagtggaagaagtttgcgggtcaaatgttttttctcaactttctgttttacatcctg
tacctgatcatcttcactgcggtggcctacaataagaggggcggaaagccaccatttccc
cttgaacgcaccacaatgggttacctgtatgtttcaggccagctactgacactgctggca
aacatctatttcttcttcagagggatgattgacatgtgtaggaagtgcccaaacctgaag
acattgctgattgatggatattatgagattctttttttagtgcagggcgccctcttcctg
gtctcagctgggctgtatctgttcgggcaggaggagtacctgggcgtcatggtgctgtgt
ctcgccctgagttgggtgaacctgctctacttctccaggggcgacaggaacatgggcatc
tacagtgtcatgatacagaagatgatcctcagcgatatcctgcggtttctttttgtctac
attgtcttcctctttggattttccgcagcggtggtcaccctgctcatagagcctcctgtg
agaaacgacactcagaatgcccagaagacgcgtctctttggttccgtcaacactggtgag
gagtgcatcaagcccaccttcacaagtatctccttcacgacgctgcagctcttcaagttc
accattggcatgggcgacatggagttctcccagggctaccacaagtacaaggaggtcttc
tacgtgctcctcctcagctacatcatactcacctacatcctgctgctcaacatgctcatc
gccctcatgaaccgcaccgtggagcggatcaccatgaagagcagcagcatctggaggctg
cagagggcagtcactatcctggacatggagaaaaggctgcctagctgcctgaggaggagg
ttccgttgtggggtggagaaaaagctggccaccgctcttggagaggaccgtcgctggtgt
ttcagagtggaggaagtcaactggaacaaatggaacatcaacctgggcaaaatcaatgag
gatcccggttcctgtgattgtttacaacagcctgcgtcagactccccgctgcacagacca
aacagagggaggagctggagaggcttcttcacggatggcagtaggcgaaggcagacaaac
cagtccacagagatgaacacaccagtctga
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