KEGG   Scophthalmus maximus (turbot): 118301167
Entry
118301167         CDS       T09850                                 
Symbol
ubb
Name
(RefSeq) polyubiquitin-B isoform X2
  KO
K08770  ubiquitin C
Organism
smau  Scophthalmus maximus (turbot)
Pathway
smau03320  PPAR signaling pathway
smau04120  Ubiquitin mediated proteolysis
smau04137  Mitophagy - animal
smau04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:smau00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    118301167 (ubb)
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    118301167 (ubb)
   04137 Mitophagy - animal
    118301167 (ubb)
 09150 Organismal Systems
  09152 Endocrine system
   03320 PPAR signaling pathway
    118301167 (ubb)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:smau04121]
    118301167 (ubb)
Ubiquitin system [BR:smau04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   118301167 (ubb)
Motif
Pfam: ubiquitin Rad60-SLD Ubiquitin_2 DUF2604 Rad60-SLD_2 TBK1_ULD Ubiquitin_5 OTU1_UBXL
Other DBs
NCBI-GeneID: 118301167
NCBI-ProteinID: XP_035482301
LinkDB
Position
2:complement(11288603..11297774)
AA seq 609 aa
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR
LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ
QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE
NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL
TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH
LVLRLRGGQ
NT seq 1830 nt   +upstreamnt  +downstreamnt
atgcagatcttcgtcaagaccctcactggcaagaccatcacccttgaggttgagccaagt
gacaccattgaaaatgtgaaggcaaaaatccaggacaaggaaggcattccccctgaccag
cagaggctgatctttgctggcaagcagctggaagatggccgcaccctctccgactacaac
atccagaaagaatccaccctccatcttgtcctgcgtctgaggggaggcatgcagatcttc
gtcaagaccctcactggcaagaccatcacccttgaggttgagccaagtgacaccattgag
aatgtgaaggccaagatccaggataaagaaggtatcccccctgaccagcagaggctgatc
ttcgctggcaagcagctggaagatggccgcaccctctccgactacaacatccagaaggag
tccaccctccatcttgtcctgcgtctgaggggaggcatgcagatcttcgtcaagaccctc
actggcaagaccatcaccctggaggttgagccaagtgacaccattgagaacgtgaaggcc
aagatccaggacaaggaaggtatcccccctgaccagcagaggctgatcttcgctggcaag
cagctggaagatggccgcaccctctccgactacaacatccagaaagaatccaccctccat
cttgtcctgcgtctgagggggggcatgcagatcttcgtcaagaccctcactggcaagacc
atcacccttgaggttgagccaagtgacaccattgaaaatgtgaaggcaaaaatccaggac
aaggaaggcattccccctgaccagcagaggctgatcttcgctggcaagcagctggaagat
ggccgcaccctctccgactacaacatccagaaagaatccaccctccatcttgtcctgcgt
ctgaggggaggcatgcagatcttcgtcaagaccctcactggcaagaccatcacccttgag
gttgagccaagtgacaccattgagaacgtgaaggccaagatccaggataaagaaggtatc
ccccctgaccagcagaggctgatctttgctggcaagcagctggaagatggccgcaccctc
tccgactacaacatccagaaagaatccaccctccatcttgtcctgcgtctgaggggaggc
atgcagatcttcgtcaagaccctcactggcaagaccatcacccttgaggttgagccaagt
gacactattgagaacgtgaaggcaaaaatccaggacaaggaaggcattccccctgaccag
cagaggctgatcttcgctggcaagcagctggaagatgggcgcaccctctccgactacaac
atccagaaagaatccaccctccatcttgtcctgcgtctgaggggaggcatgcagatcttc
gtcaagaccctcactggcaagaccatcacccttgaggttgagccaagtgacaccattgag
aatgtgaaggccaagatccaggataaagaaggtatcccccctgaccagcagaggctgatc
ttcgctggcaagcagctggaagatggccgcaccctctccgactacaacatccagaaggag
tccaccctccatcttgtcctgcgtctgaggggaggcatgcagatcttcgtcaagaccctc
actggcaagaccatcaccctggaggttgagccaagtgacaccattgagaacgtgaaggcc
aagatccaggacaaggaaggtatcccccctgaccagcagaggctgatcttcgctggcaag
cagctagaagatggccgcaccctctccgactacaacatccagaaggagtccaccctccat
cttgtcctgcgtctgaggggtgggcagtaa

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