Scophthalmus maximus (turbot): 118301250
Help
Entry
118301250 CDS
T09850
Symbol
cbll1
Name
(RefSeq) E3 ubiquitin-protein ligase Hakai isoform X2
KO
K15685
E3 ubiquitin-protein ligase Hakai [EC:
2.3.2.27
]
Organism
smau
Scophthalmus maximus (turbot)
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smau03019
]
118301250 (cbll1)
04131 Membrane trafficking [BR:
smau04131
]
118301250 (cbll1)
04121 Ubiquitin system [BR:
smau04121
]
118301250 (cbll1)
Enzymes [BR:
smau01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118301250 (cbll1)
Messenger RNA biogenesis [BR:
smau03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
118301250 (cbll1)
Membrane trafficking [BR:
smau04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
118301250 (cbll1)
Ubiquitin system [BR:
smau04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
118301250 (cbll1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf_Hakai
zf-C3HC4
zf-C3HC4_2
zf-RING_UBOX
zf-RING_5
zf-RING_2
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
118301250
NCBI-ProteinID:
XP_035482441
LinkDB
All DBs
Position
2:31298522..31303726
Genome browser
AA seq
485 aa
AA seq
DB search
MDQSDNDLQGSDGSGNLGGPDVRRRIPIKLISKQPLRSKPPPRAQRPSSRPTKSEAGEDD
NFGFKQEDRFDCGAKSGDVFANQRRFPQQMFWDYKLHLIGERDDVPIHFCDKCGLPIQLY
GRMIPCKHVFCYDCALLHEKKGDKMCPGLTLYNCTDPVQRIEQCQRGSLYMCSIVPGCKR
TYLSQRDLQAHVNHRHMRAAKSSAGRQDPLHLPPSSEVPDRFRVPQSHLPKNHVHLPNPL
QHSSHDPYSQPPPPSAHEAPPPTSALGPETFRIATVTTRKHSNLITVPIQDDSSSREPLS
GGPGPGQPPHHHPGDYSNQPPVVSHPHHMMAPPQQHFGPPPPPPPPISHQMQHPPQSSGT
PHMVYNQAPPPPMSTAPPPITPPPGHIMGQMPPYMNHPRPGPPPQHSGPPVNAPPPHHYN
PNSMQQFSEDQGTLSPPFNQPGGLSPGMWPAPRGPPPPRMQGPPPQGQMPGPHHPDQGRY
RPYYQ
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atggaccaaagcgacaatgatcttcaaggtagcgatggctctgggaatttgggtggccca
gatgtccgaaggcgaatccccatcaagctcatatccaaacagcccttaaggagcaaacct
ccgccacgcgcccagagacccagcagcagaccaactaaaagtgaggctggagaagatgat
aactttggcttcaagcaagaggaccggttcgattgtggcgctaaatctggagatgtgttt
gcaaatcagaggagatttccacagcaaatgttttgggactataagttacatttgattgga
gagagggatgacgtaccgattcacttctgtgacaaatgtggcctcccgatccagctgtat
ggacggatgatcccctgcaaacatgttttctgctacgactgtgctttgctccatgagaag
aaaggagataagatgtgtccaggcctcaccctctacaactgcacagatccggtgcagcgc
attgagcagtgccagcgtggttcgctctacatgtgcagcattgttccgggatgtaagcgc
acctacctgtcccagcgtgacctgcaggcccatgtcaaccaccgccacatgagggcagcc
aagtcgtcggctggacgccaggaccccttgcacctgcctccttcatctgaggtccctgat
cgtttccgcgtgcctcagtctcacctacccaagaaccacgtccacctccccaacccgctc
cagcacagcagtcatgatccctacagtcagccgccgccacccagtgctcacgaagccccg
cccccgacgtccgctctcggccctgaaacattccgcatcgccacagtaacaactcgcaaa
cacagcaatctcatcactgtgcccatccaagacgactcctcctcccgtgaacccctctct
ggtgggccaggccccggccagccgccccaccatcaccctggagactattctaaccagccc
cctgtcgtgtcccaccctcaccacatgatggcaccaccacagcagcactttggccccccg
cctccccctcctccccccatcagccaccaaatgcagcatccaccccaatcctctgggacg
ccacacatggtgtacaaccaggccccccctccccccatgtccacagctccaccaccaatc
acgcccccaccagggcacattatgggccagatgcccccttatatgaatcacccgcggcca
ggacctccaccacaacacagtggccctccagttaatgcccctccacctcatcattacaac
cccaactcgatgcagcagttctctgaagatcagggcaccctcagccccccgttcaaccaa
ccaggagggctcagtcctgggatgtggcctgctccgagagggcccccacccccccgaatg
cagggccctcctccccagggccagatgcccggaccacatcacccagatcagggccgctac
cggccctactatcagtaa
DBGET
integrated database retrieval system
