Scophthalmus maximus (turbot): 118301388
Help
Entry
118301388 CDS
T09850
Symbol
smfn
Name
(RefSeq) small fragment nuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
118301388 (smfn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smau03019
]
118301388 (smfn)
03009 Ribosome biogenesis [BR:
smau03009
]
118301388 (smfn)
Messenger RNA biogenesis [BR:
smau03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
118301388 (smfn)
Ribosome biogenesis [BR:
smau03009
]
Eukaryotic type
Pre-60S particles
RNases
118301388 (smfn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-GeneID:
118301388
NCBI-ProteinID:
XP_035482753
LinkDB
All DBs
Position
2:complement(8502847..8509783)
Genome browser
AA seq
275 aa
AA seq
DB search
MPACLRTSAWGLAAVEFLCRKRQSVARCAKAAYHFNGSVLQGSVLSSRVIFQSSTAGSRF
GSGFDVRVPRKHSMLSTAMSQRMVWVDLEMTGLNIEEDQIIEMACIITDSDLNILAEGPN
LIINQPDELLDGMSEWCKEHHGKSGLTQAVQDSKIILEQAEYEFLSFIRQHTPPGQCPLA
GNSVHADKRFLDKHMPQFMHHLHYRIIDVSTIKELCRRWFPEEYKMTPHKKSSHRALGDI
QESIKELQYYQANIFKATLKEKKHMLVENGNSNKM
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgccggcgtgtttgcggacttcagcgtggggtctcgctgccgttgagttcctatgcaga
aagagacagtcagtcgcgcggtgcgccaaagcagcgtatcatttcaacggcagtgttctg
cagggaagcgtattgtcgagcagggttatttttcaatcttccaccgcgggttccagattc
ggctccggttttgacgtgcgggtgcccaggaaacacagcatgttgtctaccgcgatgtcg
cagaggatggtgtgggtggacctcgagatgaccggtctcaacattgaggaggaccagatc
attgaaatggcatgcattatcacagactctgacctgaacattttggctgaggggcccaat
ttgatcattaaccagccagatgagttgcttgatgggatgtcagagtggtgtaaagagcat
catgggaagtcaggactgacgcaggctgtacaggacagtaaaatcatcctggaacaagca
gaatatgagttcctgtctttcatcagacagcataccccacctggacagtgtccccttgct
ggtaactctgtgcatgcagacaagaggttcctggataagcacatgccacagtttatgcac
caccttcattacagaatcattgatgtcagcaccatcaaggagctttgcagacggtggttt
ccagaggaatacaagatgacacctcataagaaatcctcccacagagcgctgggcgacata
caggagagcataaaagagctgcagtactaccaagccaacatcttcaaagcaactttaaag
gagaagaagcacatgcttgtagaaaatggcaacagcaacaaaatgtag
DBGET
integrated database retrieval system
