Scophthalmus maximus (turbot): 118301621
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Entry
118301621 CDS
T09850
Symbol
chrne
Name
(RefSeq) acetylcholine receptor subunit epsilon
KO
K04817
nicotinic acetylcholine receptor epsilon
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
118301621 (chrne)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
smau04040
]
118301621 (chrne)
Ion channels [BR:
smau04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
118301621 (chrne)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Sec20
Motif
Other DBs
NCBI-GeneID:
118301621
NCBI-ProteinID:
XP_035483149
EnsemblRapid:
ENSSMAG00025026225
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All DBs
Position
2:14627043..14634427
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AA seq
518 aa
AA seq
DB search
MMAAHSFGILFGVVTILGGLMVQVQCNEESKLIGDLFKDYKKNIRPVVHPDDKLEVQIKL
TLTNLISLNEKTETLTTNVWIEIQWTDYRFVWNTSDYYGIDLIRVPCNTVWLPDIVLENN
IDGKFDVAYYANVLINNTGWMYWLPPAIYRSTCAIEITYFPFDYQNCTLAFRSQTYSAKE
VDLILALNENGQAIQWVDIDPEAFTENGEWAIVHRPARKMINKRYSPDDLEYQEILFNLI
IQRKPLFYIINLILPCSLISSLVVLAYFLPAQAGGQKLTVAISVLLAQTVFLFLIAQKVP
ETSLSVPLIGKYLIFVMCVTTLIATNQIVVLNFSLRSPNTHTMSYTIKHVFLELVPRFLF
MSPLVDDSEVTTAVNGVRERRRSSFGLMQRAEEYVMKQPRSEMMFDKQRERHGLTRSIVD
NIDVSSTANLYKSLSQSAPEIKQCVDACNFIAESTKQQNNIGSEIERWVLIGKMIDKVCF
WAAFSLFIIGTVWIFLNGQYGQVPEFPFPGQSNKYVPH
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgatggcagcgcacagttttgggatactttttggagttgtaacaattctcgggggctta
atggttcaggtgcagtgcaacgaagagtcaaagttgatcggcgacctgttcaaagactac
aagaagaacatacgacctgtggttcatcctgacgacaagctggaggttcagatcaagctg
accctcactaaccttatctctctgaatgaaaagacggagactctgacaaccaacgtgtgg
attgagattcaatggactgattatcgctttgtttggaacacatctgactattatggcatc
gatctcattcgtgtcccatgcaacactgtgtggcttcctgacattgtccttgagaacaac
attgatggcaagtttgacgtggcttactatgccaatgtgttgatcaacaacactgggtgg
atgtactggctacctcctgctatctatcgcagcacttgtgccattgagatcacctacttc
ccatttgattatcagaactgcacgcttgcattcagatcccagacttacagtgccaaagaa
gtggacctcatattggccttaaatgaaaatggccaggctatccagtgggtggacatcgac
ccagaggctttcacggagaatggcgagtgggctatcgtccatcgtccagccaggaagatg
atcaacaaacggtattccccggacgacctggagtatcaggagatcctgttcaatctgatc
atccaaaggaagcccctgttctacatcatcaacctcatcctgccctgttccctcatctcc
tctctggtcgtattggcgtacttcctacctgcacaagctggggggcagaagttgaccgtg
gccatctctgtcttgctggcgcagactgtcttcctctttcttattgctcagaaggtccct
gagacgtctctctctgtccctctgatcggcaagtacctgatctttgtcatgtgcgtcacg
actctcattgctaccaatcaaattgtggtgctgaacttctccctgcgcagccccaacact
cacaccatgtcctacaccatcaaacacgtgttcctcgagttggtacctcgcttcctgttc
atgtccccgctggtggatgacagtgaagtgacaaccgcggtaaacggagtgagggagcgg
cgacgcagctccttcggcctcatgcagagagcggaggaatatgtgatgaaacaacctcgc
agtgagatgatgtttgacaaacaaagagagcgacacggcctcacgcgatcgattgtggat
aatatagacgtcagcagcacggccaacctttataaaagtttgtcccaatctgcacctgag
atcaagcaatgtgtggacgcctgcaacttcattgctgagagtacaaaacaacaaaataac
atcggatctgaaattgaaagatgggtactgattgggaagatgattgacaaggtgtgtttc
tgggctgccttttccctcttcatcattggcacagtgtggatcttcctaaatggacaatat
ggacaggtgccagaatttccatttcccggccagagcaacaaatatgtccctcattag
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