Scophthalmus maximus (turbot): 118301791
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Entry
118301791 CDS
T09850
Symbol
spata5l1
Name
(RefSeq) spermatogenesis-associated protein 5-like protein 1
KO
K26051
ribosome biogenesis protein SPATA5L1 [EC:
3.6.4.10
]
Organism
smau
Scophthalmus maximus (turbot)
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
smau03009
]
118301791 (spata5l1)
Enzymes [BR:
smau01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.4 Acting on acid anhydrides to facilitate cellular and subcellular movement
3.6.4.10 non-chaperonin molecular chaperone ATPase
118301791 (spata5l1)
Ribosome biogenesis [BR:
smau03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
118301791 (spata5l1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
AAA_16
AAA_5
AAA_22
RuvB_N
AAA_33
AAA_14
AAA_7
TIP49
NTPase_1
bpMoxR
Mg_chelatase
NACHT
Motif
Other DBs
NCBI-GeneID:
118301791
NCBI-ProteinID:
XP_035483252
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All DBs
Position
4:8464459..8469966
Genome browser
AA seq
748 aa
AA seq
DB search
MTSLRLLSVDPSDRGSQRCRLGPGLMSELGLSLGSPLLVSVPGGSCLCTAWPRSDLAEGF
LQMDLKSSSPGLISQPPTHLHLAPGQLTPLPCPKLKGVKITVVVQSFDFKKHTPSRLVHE
LVKDMLKGVHVHEKHVVNLEDFDTEIRYVVIESIIPDSASAGFITSKTGVEIAGIQTVRH
YRSGLQDQNTVSLGGLEEVSASLREMLQLPLLYPGTLSSLGVSCPRGVLLVGPPGVGKTL
LVRRVVGEVGASLVVVRGPEVVGSRPGESEEALRAVFQRARSAAEEGPCVLFLDELDSLC
PRRTGSSTPENRLVAQLLTLMDGMNRSDRFLIVGATNRPDSLDPALRRPGRFDREVVIGA
PTLQQRKAILSVLCARFPVCPTVDMAELAQRTSGYVGADLSALCREAAMSAIRENSKGSG
EQAVRMKHFQEALKLVRPSCLRSSLGRTELSPVSWERIGGLDEVKLKLRQSIEWPMRFPE
AFVRLGLSRPRGVLLYGPPGCAKTTLVRAAATSSHSAFLSVSGADLYSPYVGDSEKALAQ
LFRQARACAPCVLFLDEIDSLIGSRSSSQTPNGVHTRLLSVLLNEMDGVGLKTLERRGTE
KILQAEGAEESHTQEQLDCQEVCNKDVMVVAATNRPDCLDSALLRPGRLDHLIYVPPPDQ
QARLAILKVCTHSMPVDADVCLEDLATKTTLYSGADLENLCKEAALLALQEENMEASVIK
HTYFLQSLRKMSPSLTAQQIHAYQTPLR
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atgacgtctctgaggctgctgtcagtggacccgtcagaccggggctctcagagatgcagg
ctgggtccaggcttgatgtcggagctgggtctgagcctgggctcccccctgctggtgtct
gtccccgggggaagctgcctgtgcaccgcctggccccggtctgacctggctgagggcttt
ctgcaaatggacctgaagagttcgtctcccggcctgatctctcagcctcccacgcacctg
cacctggcccccggccagctcacgcctttaccctgccccaaactgaaaggtgtaaagata
actgtggtagtgcagagttttgattttaagaagcacacaccctcccgccttgttcatgag
ctcgtgaaagacatgctgaaaggggtacatgtccacgagaagcatgtggtaaatctggag
gattttgacacggagattagatatgttgtcattgaaagcatcatcccggattctgccagt
gctggattcatcacctcgaaaaccggtgtggagatcgctggcatccagacggtccggcat
tacaggagtgggctgcaggaccagaacacagtgtcactggggggtctggaggaggtgagt
gcctccctgagagagatgctgcagctgcccctgctgtatccaggaaccttgagctctctg
ggtgtgtcgtgtcccaggggtgtgcttctggtggggcctccgggtgtgggcaagacgctg
ctggtccgcagagtggtgggggaggtgggagccagcctggtggtggtcagagggccagag
gtggtggggtcacggccaggtgagagcgaggaggcgctgcgtgctgtgtttcagcgcgct
cggtctgcagctgaagagggtccatgtgtgctgttcttagatgagctggactccctgtgt
ccaaggagaactggctcatcgacaccggagaaccggctggttgctcagcttctcacgctg
atggacgggatgaatcgctctgatcgcttcctcattgtcggagccaccaaccggccggac
agcttggacccagcactgcgcagacctggaagattcgacagagaggttgtcattggagct
cccacactgcagcagagaaaagccatattgtctgttctgtgtgccaggtttcctgtgtgt
cccactgtggacatggcagagcttgcacagagaacttcgggctacgtaggagcagacctc
agtgccttgtgcagggaggctgccatgagcgctatacgggaaaactcaaagggttcagga
gagcaggcggtgcgtatgaagcacttccaggaggcgctgaagttggtgcgtccctcctgc
ctgcgcagcagcctgggcaggaccgagctctccccagtgtcttgggagcggataggaggc
ctggatgaggtcaaactcaaacttagacagagtattgagtggccaatgaggtttcccgag
gcctttgtacgtctgggtctcagtcggccccgtggcgttctgctctacggacctccgggt
tgtgcaaagacgacgcttgtcagagctgcagcgacctcctctcactctgccttcctgtcc
gtcagtggtgctgacctctactctccttatgtcggagactcggaaaaggctttagcacaa
ctgtttcgtcaggcccgggcctgtgctccctgtgtcctgttcctcgatgaaatcgactct
ctgattggctcacggtcgagcagtcagacaccgaacggtgtacacacacgcctcctgtcc
gtgctcctgaatgagatggacggggtcggcctgaagacgctggagaggagagggaccgag
aaaatcctccaggccgagggagcggaggagagtcacacacaggaacagctggactgccag
gaagtatgcaacaaagatgtgatggttgtcgctgccacaaacagacctgactgtttagac
agtgccctgctcagacccggcagactggaccacctcatctatgtcccaccgcccgaccag
caggctcgacttgccatcctgaaggtgtgtacgcactcgatgcccgtcgatgctgatgtg
tgtctggaggatctggcgacaaagaccacactttactctggagctgatctggagaacctg
tgtaaagaggccgctctgttggcactacaagaggagaacatggaggcttctgtcatcaaa
cacacctacttcctccagtcgctccgaaaaatgagcccttccctcactgcccagcagatc
cacgcatatcaaacacccctcagatga
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