Scophthalmus maximus (turbot): 118301919
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Entry
118301919 CDS
T09850
Symbol
vps35
Name
(RefSeq) vacuolar protein sorting-associated protein 35
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
118301919 (vps35)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smau04131
]
118301919 (vps35)
Membrane trafficking [BR:
smau04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
118301919 (vps35)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
FerA
Motif
Other DBs
NCBI-GeneID:
118301919
NCBI-ProteinID:
XP_035483504
UniProt:
A0A8D3ARW9
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Position
4:complement(25774034..25793821)
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AA seq
797 aa
AA seq
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MPTTQSPQDEQEKLLDEAVQAVKVQSFQMKRCLDKNKLMDALKHASNMLGELRTSMLSPK
SYYELYMAISDELHYLEVYLTDEFAKGRKVADLYELVQYAGNIIPRLYLLITVGVVYVRS
FPQSRKDILKDLVEMCRGVQHPLRGLFLRNYLLQCTRNILPDDGEQTEGPEEMTGEINDS
IDFVLLNFAEMNKLWVRMQHQGHSRDREKREKERQELRILVGTNLVRLSQLEGVNVDKYK
QTVLAGVLEQVVNCRDSLAQEYLMECIIQVFPDEFHLQTLNPFLRSCAELHQHVNVKNII
IALIDRLALFAHREDGPGIPAEIKLFDIFSQQVATVIQSRQDMPSEDVVSLQVSLINLAM
KCYPDRVDYVDKVLESTVEIFNKLNLEHIATSSAVSKELTRLLKIPVDTYNNILTVLQLK
HFPPLFEYFDYESRKSMSCYVLSNTLDYNTTIVQQEQVDAILSLVSTLIQDQPDQPADDP
DPEDFAEEQSLVGRFIHLLHSDDPDQQYLILNTARKHFGAGGNQRIRYTLPPLVFAAYQL
AFRYKENSSLDDKWEKKCQKIFSFAHQTISALIKAELAELPLRLFLQGALAAGEIGFENH
ETVAYEFMSQAFSLYEDEISDSKAQLAAITLIIGTFERMRCFSEENHEPLRTQCALAASK
LLKKPDQCRAVSICAHLFWSGRSTEKNGEEIRDGKRVMECLKKALKIANQCMDPSLQVQL
FIEILNRYVCFYERENDAVTVQVLNQLIQKIREDLPNLEASEETEQINKHFQNTLEHLRL
QRESPESEGPAYEGLVL
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atgccgaccacgcagtcgccccaggacgagcaggagaagcttctggatgaagctgtgcag
gcggtcaaggtccagtctttccagatgaagcgatgcctggacaagaacaagctgatggat
gctctgaagcatgcctctaacatgctgggtgagctgaggacctccatgctttctccaaag
agctactatgagctctacatggccatctctgacgaactccactatctagaggtttatctg
actgatgagttcgccaagggacgcaaggtggcagatctgtatgagctggtccagtatgca
gggaacatcatccccagactctatctgttaatcacagtgggtgtggtgtacgttcgctcc
ttcccccagtctcgtaaggacattctgaaggacctggtggagatgtgtcgcggtgtccag
cacccactcaggggtctcttcctcagaaactacctgttgcagtgcacccgcaacatactg
ccagatgatggagagcagacagagggaccagaggagatgaccggtgaaatcaacgactcc
atcgactttgtactgctgaactttgcggaaatgaacaagttatgggtgcgaatgcagcat
cagggtcacagccgagacagagagaagagagagaaggagcgacaagaactcagaattctg
gtgggcaccaacctagttcgcctcagccagcttgagggtgtcaacgtggacaagtacaaa
cagacggttcttgctggagtgctggagcaggtggtgaactgcagagactcattggctcag
gagtatctaatggagtgcatcattcaggttttcccggatgagttccaccttcagaccctg
aaccctttcctgcgctcctgtgctgagctccatcaacacgtcaacgtcaagaacatcatc
attgctctcattgacagactcgctctgtttgctcatcgagaagatggccctggcattcca
gctgagatcaaactgtttgacatcttctctcaacaagtggccactgtcattcaatctcgc
caggacatgccatcagaggacgtggtctctctccaggtgtctctcatcaatttggccatg
aaatgctaccccgaccgcgttgactatgtggataaggtcctggagagcactgtggagatc
ttcaacaagctcaacttggaacacatagcgaccagcagcgccgtgtccaaggagctcacc
cgactgttgaagatcccagtggacacctacaacaacatcctgacagtgctgcagctcaag
cacttcccaccgctctttgagtacttcgactatgagtcgcgcaagagcatgagttgctat
gtgctgagcaacacgctggactacaacaccaccattgtgcaacaggaacaggtggacgcc
atcttgagtttggtatcgacactgatacaggaccagccagaccagccagctgacgatcct
gaccctgaggactttgctgaggagcagagccttgtgggtcgcttcatccacctgcttcac
tctgacgatcctgatcaacagtaccttatcctgaacacagcccgaaaacactttggtgcc
ggtgggaaccaaaggattcgctacacactccctcctctggtgttcgctgcctaccagctg
gccttcagatacaaggaaaactcctcactggatgacaagtgggaaaagaagtgccagaag
atcttttcctttgcccaccagaccatcagtgcacttatcaaggctgagcttgctgagctg
cctcttcgactcttcctgcagggggcgctggcagcgggcgagattggctttgagaaccat
gagactgtagcatacgagttcatgtcacaggccttctccctgtatgaggatgagataagt
gactcgaaagcccagttggcagccatcacactgatcatcggtacctttgagcgaatgcgt
tgtttcagtgaggagaaccacgagccgctgaggactcagtgtgcgctggctgcctccaag
cttctgaaaaagcctgaccagtgccgagctgtcagtatctgcgcccacctcttctggtcc
ggtcgcagtactgaaaaaaacggtgaagagatccgcgatggtaagcgtgtgatggagtgt
ctaaagaaagccctgaagattgccaaccagtgcatggacccatcactgcaagtccagctt
ttcattgaaatcctcaacagatacgtctgcttctatgagagagaaaacgatgcggtgact
gtccaggtattaaaccagctgatccaaaagatcagggaagatcttcctaacctggaggca
agtgaggaaacggagcagatcaacaaacacttccaaaacacactggagcatcttcgcctg
cagagagaatcccccgagtccgagggtcctgcctatgagggcctggtcctttaa
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