Scophthalmus maximus (turbot): 118301942
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Entry
118301942 CDS
T09850
Name
(RefSeq) DNA-binding protein RFX7-like
KO
K09175
DNA-binding protein RFX7
Organism
smau
Scophthalmus maximus (turbot)
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smau03000
]
118301942
Transcription factors [BR:
smau03000
]
Eukaryotic type
Other basic domains
RF-X
118301942
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFX5_N
RFX_DNA_binding
Pox_D5
Cdc6_C
Motif
Other DBs
NCBI-GeneID:
118301942
NCBI-ProteinID:
XP_035483543
LinkDB
All DBs
Position
4:13540492..13557266
Genome browser
AA seq
1442 aa
AA seq
DB search
MAEADPLQPQQQQPQPQQADHGAGSLPGLLLPGLQGAEASALQLRIKNSICKSVQSKVEN
ILQDVEKFSDIEKLYLYLKLPSGPSSCTDKSDQSALSSSRTQQMHAFNWIRNYLEEYPET
SLPKQEVYDEYKSFCDNLNYHPLSAADFGKMMKNVFPNMKARRLGMRGKSKYCYSGLRKR
PFVHMPPLPTLDLHKPAEGLQCDVLESPNQLSSIKEEVRFAACDLVCEWAQKVLKRQFDA
VEDLARFLIDSHYISNKSLAALTIVTGTATEVKAPQSVSAFIPTAEAHSFQPQLSSPSVD
AKQQLQRKIQRKQQQQEQRLHSPLPGEGQTKRADDSVPCGSPTPPSPQPTIGIVVAAVPS
PITVQRSGQLMAPSPVGTAESKVLPINFQMVTQPMKQSLKSLQSFLPSPAGERNARQRYA
QILPKPLATTAITLHSPSTMILANSSPIKTVMTTCHVSPVSLVKMTAISLAPNSSNTTTT
TSLTNTTLRPVSAGISGSAVAEDISSNQTTRSASAVPILAPVARPGQASGSIDIEMEVEA
IHKNSQMQNPINLIFTQGAMANRMGGAVQRAASVPIPQNKDFLGLEETSITKYDYYGKSS
SSNYNMAEVDSSNSSAKNTTILHLTPTPQNTSTVSLLNTSGAPSFRESSCVTSTREGFSS
TKSLRKRSGISPELSPVKRAFMPQQPVGGGVGLGYGFRKTVGYVSRPGAPARPESAPATR
EVEVKMNPVLTTQVQSLCTSSFRPSGFYSVAKTQGLLQRKNTSTVMETSGSVSHALIQQQ
QGHTMANVNVIPNNPSLQQHPGDGRISNSSTGSLEGAQQQTYAQSNLANETLEFLGQVSS
SNQLPMQTDMDYFSFDDDVTQDSIVEELVQMEEQMKLNSMRAFGECVTLQGKPDNIMSPN
QSINFYHAANNSTNPIHTPTPTPTPTPTPEMMGGTHSLTGESPCSRFTSTTPVDSALGSS
RHTPVGTPHSGCSSTVPPSPVECRNPFAFTPINSSMTGFHDGSTVSSSPVKPMQRPMATH
PDKTRLEWMNNSYNSSSGSLNKSNGGMGILPSYQGLIDDHFQKPHAFAVPHARHLDSSFG
RLTPISPVQQQVANMANMTKQEGFAVPAPLDSKTTVPATNFRCRSVSPAVHQRNFGGNTV
NSLLPGVLRSMASPFNSPVTPEMLNIFANSQTNLGASSMAQRSRSVPLNIMMQTEVLPAP
GQQCSNKNITNVLRKKLDGERDDALRGLGISNLPSSYTACMNLTQILESDPSLSCNDNHL
SMMTSDPTSTCKLQRPDYLIENAINEEMILSASDSRLQSVCGEHRQNQSMLLSLNPLQQQ
QEELQQHQQLDFSSTVKDLLTDNRLSAGNRLIEQVSELTTGGAEFPCGIRMTSELSSSFN
DLNALDPNLLFDPNQHQSQYQNTAAEELVNDPLFQHITSETAHSSGLDWLESKDQTTVGL
MG
NT seq
4329 nt
NT seq
+upstream
nt +downstream
nt
atggctgaggcggaccccctgcagccgcagcagcagcagccgcagccgcagcaggcggac
cacggggcggggagcctgcccggcctgctcctccccgggctgcagggcgccgaggccagt
gcgctgcagctccggatcaagaactccatctgcaaatctgttcaatcaaaagtggaaaac
attctgcaagatgtcgagaagttctcagacatcgaaaagctctacctctaccttaagttg
ccttctggtcccagcagttgcactgataaaagtgaccagagcgccctgtcgtcaagccgc
acacagcagatgcatgcgttcaactggatccgcaattatttagaggaatatccagagacc
tctcttcccaaacaggaggtctatgatgaatacaagagcttctgtgacaatctcaattac
cacccactgagtgcggcagactttggaaaaatgatgaaaaacgtcttcccgaacatgaag
gcgcgtcgactgggcatgagaggaaaatctaaatattgctatagtggattaagaaagaga
ccctttgttcacatgccgccattacccacactggatctccataaaccagcagaaggactg
cagtgtgatgtcctggagtcaccgaaccagctgagcagcataaaggaggaggtgcgattt
gctgcctgtgatctggtgtgtgagtgggcccagaaggtgctgaaacgccagtttgatgct
gtggaagatctggctcgcttcctaatcgacagccattacatcagcaacaagtctctggca
gctctcaccattgtgactggcacagcaacagaggttaaggctccacagtcggtgtcagca
ttcatccccactgccgaggctcactccttccagcctcagctgtcgtcgccgtctgtcgat
gcaaagcagcagcttcagaggaagatccagaggaagcaacaacagcaagaacagaggctg
cactcacctttgcctggagagggacaaaccaagagggcagacgacagtgtgccttgtggt
agccccacccctccctcacctcagccaaccatcggcattgtggtcgctgctgtcccgagc
cccatcacagtgcagagaagtgggcagctgatggccccaagtccagtgggaacagcggag
agcaaagtgctgcctatcaatttccagatggtgacgcagccaatgaaacagagcctgaaa
agcctgcaaagttttctgcccagtcccgcgggagagcgcaatgctcggcagcgctacgct
caaatcctgcccaaacctttggccacgaccgctatcaccttgcactcgccctccaccatg
atccttgccaacagtagcccaattaaaactgtgatgactacatgtcatgtcagcccagtg
agtttggtcaagatgacagctatatcgctggcacccaacagcagcaacaccaccaccacc
acatcgcttactaatacaactctgcggccggtatctgcaggtatcagcggttctgcagtt
gcggaagacatcagctccaatcagaccacgaggagtgcttctgcagtccccattctggcc
ccggtggccaggcctgggcaggcctctggcagtattgacattgaaatggaagttgaagct
atacataaaaacagccagatgcaaaatcccatcaatctaatttttactcaaggagcaatg
gccaatagaatgggaggggctgtgcagagagctgccagcgtgccaattcctcagaataaa
gatttcctgggtctggaagaaacatctatcactaaatacgactactatggaaagtcctca
tcaagcaattacaatatggcagaagttgatagcagcaatagtagcgccaaaaataccacc
attttgcacttaactcccacccctcagaataccagcactgtttctttgctgaacaccagt
ggcgcaccttcttttagggaaagcagttgtgtgacatcaacaagggaaggtttctcgtcc
actaagagcctcaggaaacgctcgggcattagcccagaactttcgccagtcaaaagggct
tttatgccccagcagccagtagggggcggtgttggtcttggatatggattcagaaagacg
gtcggttatgtctccaggccaggagccccagctagacctgaaagtgcgcctgccaccagg
gaggtggaagtgaaaatgaaccctgtcttgaccactcaagtccaatcactctgcacttcc
tccttcagacccagtggcttttactctgttgccaaaacacagggcttactccagaggaaa
aacacttcaactgttatggaaactagtggttcagtcagtcacgcattaatacagcaacag
caggggcacacaatggctaacgtgaatgtcatacctaataaccccagcctccagcaacat
ccaggtgatggtaggatctcaaactcaagtacaggaagcctggagggagctcaacaacag
acctacgctcagtccaaccttgccaacgaaaccttggagtttttgggtcaagtttcatca
tccaaccagctccctatgcagacagacatggactacttttcctttgatgatgatgtgact
caggacagcattgtggaggagctggtgcagatggaggagcagatgaaactaaacagcatg
cgtgcgtttggagaatgtgtcacactgcaaggcaagcccgacaacattatgtcccctaat
cagtcaatcaatttctatcacgctgcaaacaacagcaccaacccgatccatactccgacc
ccaacacccactcccacgccaacacctgagatgatgggaggaactcacagcctcactggg
gagagtccctgctcccgctttacctccacaactccggtggacagcgcactgggaagcagt
cgtcacaccccagttggtactccacactccggctgtagcagcactgtgcctcccagtcca
gtagagtgcaggaacccctttgcattcacacccatcaactccagcatgactggtttccat
gacggcagcacggtctccagcagccccgtgaagcccatgcagaggccgatggccacccac
ccagacaagaccaggctggagtggatgaataacagttataacagcagcagtgggagctta
aacaaatcaaacggtggaatgggaatcctccccagttatcaaggcctgatagatgaccat
tttcagaaacctcacgcctttgcagtccctcatgcacggcacctcgacagcagttttggc
cgcttgactcccatctcgcctgtgcagcagcaggtagctaacatggcgaacatgaccaag
caggagggttttgccgtgcctgccccactggatagtaaaaccaccgtaccggctacaaat
tttcgatgccgcagtgtaagccccgctgtgcaccagaggaacttcggtggaaacactgta
aacagtttacttcccggtgtccttcgttcaatggcgtctccctttaactctcccgtgacg
cctgagatgttgaacatttttgcgaacagccagacaaatcttggggcgagcagcatggct
cagcggagccgctctgtgccgctcaacatcatgatgcagactgaggtcctgcctgcaccg
ggccaacaatgcagcaacaaaaacatcaccaatgtccttcggaagaagctggatggtgaa
cgtgacgatgctttgcggggtctgggcatcagtaatttaccttccagttacactgcatgt
atgaacctcacccagatccttgagtctgaccccagcctttcctgcaatgacaaccacctc
agcatgatgacctctgaccccaccagcacatgtaagttgcagaggccagattaccttata
gaaaatgccatcaatgaagaaatgattctctctgcaagtgacagccgactccaatcagtc
tgtggagagcatcggcagaaccagtccatgttgttgagtttgaacccactgcagcagcag
caagaagaactacagcagcatcagcagctggatttcagcagcactgtcaaagacctcctg
acagataaccgactctctgcgggcaatcggctcatcgaacaggtgtcggagctgactaca
ggcggggcagagttcccatgtggaatcagaatgacatcggagctctcgagtagcttcaat
gatctcaatgctttggacccaaatcttctgtttgaccccaaccagcatcaaagccaatat
caaaacactgccgcagaggagttggtgaatgacccgctgttccagcacattaccagcgag
acggcacattcaagtggacttgactggttagaaagcaaagatcaaaccacagttggattg
atgggttga
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