Scophthalmus maximus (turbot): 118301974
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Entry
118301974 CDS
T09850
Name
(RefSeq) transient receptor potential cation channel subfamily M member 1-like
KO
K04976
transient receptor potential cation channel subfamily M member 1
Organism
smau
Scophthalmus maximus (turbot)
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
smau04040
]
118301974
Ion channels [BR:
smau04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
118301974
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Paralog
GFIT
Motif
Pfam:
LSDAT_euk
TRPM2
TRPM_tetra
Ion_trans
LSDAT_prok
Motif
Other DBs
NCBI-GeneID:
118301974
NCBI-ProteinID:
XP_047187598
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All DBs
Position
4:1163582..1181578
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AA seq
1615 aa
AA seq
DB search
MDNRGRRGTNGSFKQSSIKRSASSGSQKIHRVWIERTFQKRECIQIIPSKDASRCSCGQM
VAQHTILPGARDEGPPLVQLEGQAAEKWSPLKHTQTSPTDAYGVIEFQGGGHVNKAMYIR
VSYDSKPDSLLHLMVKDWQLELPTLLISVHGGLQNFDLPPKLKQVFGKGLIKAAVTTGAW
IFTGGVSTGVIRHVGDALKDHSSKSRGKVCAIGIAPWGIIENKEDLIGRDVTRPYQTMSN
PLSKLSAPNGSHSHFILSDNGTSGKYGAEVRLRRQLEKHIALQKINTRLGQGVPVVCLIL
EGGPNVISIVLESLREDPPVPVVVCDGSGRASDIISFAHRYCEEDGLVSDSVKDQLLVTI
QKTFNYSRSQAQQIFLMVMECMKKRALITVFRMGSEGQQDIEMSILTALLKGTNASASDQ
LSLALAWNRVDIARSQIFVFGLHWPPVRGLPTDRPKSPAAQRTAAGGGGGGGGGGKGKAR
GKKAKGGKTKPEVPEETDPRKLEMLSWVNSLEQAMMDALVLDRVDFVKLLIENGVNIHHF
LTIPRLEELYNTKLGPANTLHFVVRDVKKGNLPPDYQITLIDIGLVLEFLMGGAYRCKYT
RKSFRTLYNNLYGLKRPKALKLLGMEDDEPRAKGKGKKNKKKEEEVDIDIDDPEVSRFQY
PFHELMVWAVLMKRQKMALFLWQRGEEAMAKALVACKLYKAMAHESSQSELVDDIYQDLE
NNSREFGQLAYELLDQSYKHDEQVAMKLLTYELKNWSNSTCLKLAVAAKHRDFIAHTCSQ
MLLTDMWMGCLRMGKSNCLKVILGIVFPPAILLMDFRLGEEASCHSSKESNDSKSKDDDD
KSSKDAVSNVDATSKKGDEEENQKKSHKRIPIGKMIYEFYNAPYTKFWFNTISYLVYLML
YNYIILVKMERWPSLQEWIVISYIITLGLEKVRQILMSEPGKLKQKINVWLEDYWNITDL
AAISVFLLGLLLRLQNEPYMGHGRVIYCVDIIFWYIRVLDIFGVNKYLGPYVMMIGKMMI
DMLYFVVIMLVVLMSFGVARQAILHPDEVPTWRLARNIFYMPYWMIYGEVFADSIDLYAM
EINPPCGDNMYDEDGKKLPPCIPGAWLTPAIMACYLLVANILLVNLLIAVFNNTFFEVKS
ISNQVWKFQRYQLIMTFHDRPILPPPLIVLPHIYIVLKRLCCRCRRRPEGERDDRERRLQ
LMLSADELKSLHEFEEQCVEEYFREKDDEKQSSNNERIRVTSERVENMFMRLEEVNEREH
SMKASLQTVDLRLSQLEEFSGRMMNALEKLAGVDRAELVRSRSRGSSVCEPSALLRHGSI
NSSDGYSLYRYQLEHDDRVSVSGDTEGHDRRIQLSPERRGRDAAGQDTLDWRPVVITATS
GDVKEFGSTLEVRALKDRTQSLSSVDIRISPCDPDLRTPGAPPASPHPHPTDAGTEKPAE
KSRLEAAASFPLEASKVTEYLVSASLSGSASSDRKSLSNIVCSSAPQDQEDAVSLTQQTT
GRGEETKQEEEEPRSSDISPPCSPPDGNHGNMEGEEPSEQLLVGEDRMYPTLRSKSLNAN
PRKTRTKRKEDEETPRSASSVRDLVSAFSGGAGGHGPEPGPGPGPGPEPGPGPDL
NT seq
4848 nt
NT seq
+upstream
nt +downstream
nt
atggacaacagagggaggagagggaccaacggatccttcaaacagtcgtccatcaaacgc
agtgcgtcctctggatcacagaagattcacagagtatggatcgagaggacgttccagaag
agagaatgtatccagattattcccagcaaagacgccagcaggtgcagttgtggtcagatg
gtggcgcagcacaccatccttcctggggccagagacgaggggccaccactggttcagctg
gagggccaagctgcagagaaatggagtcccctcaaacacacccagacctctcccaccgat
gcctacggagtcatcgagtttcagggaggaggacatgtcaacaaggccatgtacatcagg
gtctcctatgactctaaaccggactctctgctccacctgatggtgaaggactggcagttg
gagctgcctacattgctcatctctgtccacggaggccttcagaactttgacctacctccc
aaactgaagcaggtatttggcaaaggactgatcaaagcagctgtgaccaccggagcctgg
atcttcactggaggagtcagcacaggagtgatccgccatgttggagatgctctgaaagat
cattcgtccaagtccagggggaaagtctgtgctatcggcatcgcgccgtgggggatcatc
gagaacaaagaagacttgatcgggagagacgtgacccggccctatcagaccatgtccaac
ccgctcagcaagctgtcggccccgaacggcagccactcccacttcatcctgtccgacaac
gggaccagcgggaagtacggcgccgaggtccgcctccgccgacagctggagaaacacatc
gccctgcagaagatcaacacacgtctgggtcagggggtcccggtggtgtgtctgatcttg
gaggggggtcctaacgtcatctccatcgtgctggagagtctgagggaggatcctccggtc
cccgttgtggtctgtgatggcagcggtcgagcctcggacatcatatcctttgctcacaga
tactgtgaggaggacgggctggtgagcgacagcgtcaaagatcagctgctggtcaccatc
cagaagaccttcaactacagccgcagccaggcgcagcagatcttcctcatggtgatggag
tgcatgaagaagagagctctgatcacagtgttcaggatgggctcggagggacagcaggac
attgagatgtcgatcctcacagctctactcaaagggaccaatgcgtcggcgtcagatcag
ctgagtttggccttggcctggaaccgagtggacatcgctcgcagtcagatctttgtgttc
ggactccactggcctcctgtgagaggtttacccaccgaccggcccaaaagtccagcagcc
cagcgaacagcagcaggaggaggaggaggaggaggaggaggggggaaagggaaggccagg
gggaagaaagcaaaaggaggaaagactaaacctgaggtccctgaagagaccgaccccagg
aaactggaaatgctcagctgggtcaactctctggagcaggccatgatggacgctctggtg
ctggacagagtcgactttgtgaagctgctgattgaaaacggcgtgaacatccaccacttc
ctcaccatccctcgtctggaggagctctacaacacgaagttgggcccggccaacacgttg
cacttcgtggtgagagacgtgaaaaaggggaatcttcctccggattaccagatcacgctg
atcgacatcggactggtgctggagttcctgatgggcggagcctatcgctgcaaatacacc
aggaagagcttcaggacgctgtacaacaacctgtacggcctgaaaagacccaaagctctg
aaacttcttgggatggaggacgacgagccccgtgcgaagggaaaggggaagaagaacaag
aagaaggaggaggaggtggacatcgacatcgacgaccctgaggtcagcaggtttcagtac
cccttccacgagctgatggtttgggcggtgctgatgaagcgccagaagatggcgctgttc
ctttggcagcggggggaggaggccatggccaaagctctggtggcctgcaaactttacaag
gccatggcccacgagtcgtcgcagagcgagctggtggacgacatctaccaagacctggag
aacaactccagggagtttggtcagctggcctacgagctcctggatcagtcgtacaaacac
gacgagcaggtggccatgaagctgctgacgtacgagctgaagaactggagcaactccacc
tgcctgaagctggccgtcgccgccaaacacagagacttcatcgcccacacctgcagccag
atgctgctgacggacatgtggatgggctgcctgaggatgggcaagagcaactgcctcaag
gtgatcttagggatcgttttccctcctgccatcctcctcatggatttccgtctcggagaa
gaggcttcgtgtcattcgtccaaagagagcaatgacagtaaaagcaaagatgacgatgac
aaatccagcaaggacgccgtctctaatgtcgacgccacgtcaaagaaaggagacgaagaa
gagaaccagaagaagagccacaaaaggattcccatcgggaaaatgatctatgagttctac
aatgctccctacaccaagttctggttcaacacgatctcgtacctggtctacctgatgctg
tataactacatcatcctggtgaagatggagcgatggccgtctctgcaggagtggatcgtc
atctcttacatcatcactctgggactggagaaagtcagacagatcctgatgtcggagccg
gggaagctgaagcagaagatcaacgtgtggttggaggactattggaacatcaccgatctg
gcggccatctccgtcttcctgctgggtttgctgctgcggctgcagaacgagccctacatg
ggccacgggcgcgtcatctactgcgtggacatcatcttctggtacatccgagtcctggac
atcttcggagtcaacaagtacctgggaccctacgtcatgatgatcgggaagatgatgatc
gacatgctgtactttgtggtcatcatgctggtggtgctgatgagcttcggcgtggctcga
caggcgatcctccacccagacgaggtgccgacgtggcgtctggcgcgcaacatcttctac
atgccgtactggatgatctacggagaggtgtttgccgactccatagacctttatgcgatg
gaaatcaaccctccgtgtggagacaacatgtacgatgaagacggtaagaagcttcctccc
tgtatccccggggcctggctcactccggccatcatggcctgttacctgctggtggccaac
atcctgctggtcaacctgctcatcgccgtcttcaacaacactttcttcgaggtgaagtcc
atctccaaccaggtgtggaagttccagcgctatcagctgatcatgacgttccacgaccgc
cccatcctgccgcctccgctcatcgtccttccgcacatctacatcgtcctgaagaggctc
tgctgccgctgccgccgccggccggagggagaacgcgacgaccgcgagagacgactgcag
ctgatgctgagtgcagacgagctgaagagtctgcacgagttcgaggaacaatgtgtggag
gaatacttcagagagaaagacgacgagaaacagtcgtcgaacaacgaacgaatcagagtc
acatcagagagggtggagaacatgttcatgcgtctggaggaggtgaacgagagggagcac
tcgatgaaggcgtccctgcagacggtcgacctccgtctgtcccagttggaggagttctct
ggtcggatgatgaacgctctggagaagctggccggcgtcgaccgggccgagctcgtgcgg
tcgcgctccagaggatcttccgtgtgcgagccgtccgctctgctgcgacacggcagcatc
aacagctccgacggctacagtctgtaccggtaccagctggagcacgacgaccgggtctca
gtgtccggggacacggagggacacgaccggaggatccagctgagtccagagcgacgggga
cgagacgcagcaggtcaggacacgttagactggagacccgtagtcatcacggctacctca
ggtgatgtgaaggagttcggctcgaccctggaggtgcgagcactaaaggaccggactcag
tctctgtccagtgtggacatccggatctccccctgtgacccagacctcagaacccccggg
gcccctcccgcttcgccccatccgcacccgacggacgccggcacggagaaaccggctgag
aagagccggctggaggcggcggcgtccttccctctggaggcgtccaaggtcacagaatat
ctcgtctccgcgagcctcagtggctccgcctcctccgacaggaagtcgctcagcaacatc
gtctgcagctccgcccctcaggaccaggaggacgccgtcagcttgacccagcagacgacg
ggcaggggagaagaaaccaaacaggaagaggaggagccaaggtcgtccgacatctcgccc
ccctgctccccgccggacggtaaccacggtaatatggagggggaggagccatctgagcag
ctgctggtcggggaggacaggatgtacccgacgctacgctccaaaagtctcaacgccaac
ccgaggaagacgaggaccaagaggaaggaggacgaggagacgcctcgctcagccagcagc
gtcagagacctggtgtcggccttcagtgggggggcggggggccatggtccagaacctggc
cccggtccaggtccaggtccagaacctggtcccggtccagatctttga
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integrated database retrieval system
