KEGG   Scophthalmus maximus (turbot): 118301980
Entry
118301980         CDS       T09850                                 
Symbol
katnb1
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1
  KO
K18643  katanin p80 WD40 repeat-containing subunit B1
Organism
smau  Scophthalmus maximus (turbot)
Brite
KEGG Orthology (KO) [BR:smau00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:smau04812]
    118301980 (katnb1)
Cytoskeleton proteins [BR:smau04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Microtubule severing proteins
     118301980 (katnb1)
SSDB
Motif
Pfam: WD40 Katanin_con80 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz EIF3I Beta-prop_EML_2 WDR55 Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_EML ANAPC4_WD40 WD40_MABP1-WDR62_1st Beta-prop_WDR75_1st Beta-prop_DCAF4 Beta-prop_TEP1_C NBCH_WD40 Beta-prop_IFT122_1st Beta-prop_SPT8 Beta-prop_SCAP Beta-prop_EIPR1 WD40_RFWD3 Beta-prop_RIG_2nd WDR90_beta-prop_4th Beta-prop_Vps41 Beta-prop_IFT140_1st Beta-prop_WDR19_1st Beta-prop_HPS5 Beta-prop_WDR35_TULP_N Beta-prop_VPS8 Beta-prop_IP5PC_F PROPPIN Beta-prop_LRRK2 WDR54 Beta-prop_RIG_1st RMC1_N Ge1_WD40 WD_LRWD1 Cytochrom_D1 Beta-prop_IFT122_2nd Beta-prop_NUP159_NUP214 VPS8_N
Other DBs
NCBI-GeneID: 118301980
NCBI-ProteinID: XP_035483631
LinkDB
Position
4:complement(817244..827360)
AA seq 696 aa
MAAANATKISWRLQEFEAHSSSVSCLALGKNSGRLLATGGEDCRVNIWAVSKANCIMSLT
GHKSPVECVQFNTSEEQVVAGSQSGSIRVWDLEAAKILRTLMGHKSNITSLGFHPFGDLL
ASSSMDTNIKLWDVRRKGYVFRVKGHTQAVRSLAFSPDGRWLASASDDSTIKLWDLAQGK
TITEFKSHTAAVNIVQFHPNEYLLASGSCDRTIKLWDLEKFTMISSLEGDTSPVRCAFFS
PDGGCLFSGATDTLRVFGWEPDRCFDTVPVGWGKVSDLAVCNQQLIGVSHQLSSVSSYVV
DLKRVKKSGGSVIQGIVRDNEPLAEPKDPRGAALRKSYARPSTTCSSQRVKQRSESERRS
PEGERRSPSEDEGDEKLSSAEIHNPEDFKEIFQPKNAISRTPPKMSEPFPAPPEDEIILA
IGRQLQDMTCPFPDKQQAPPLASSTPVQRVEPTVVSSAVGPASSSSNPPASRPPPPPQPP
VTTARTRPPPKIILSTRNEPIGLNVADFLPPSANSRPAALSDEDELSQIKKGHATMCVML
SSRRKNLETVRMAWAREDAKNALDIAVSMSDLSIVVDILNILNLQPSLWKLDLCTTVLPQ
IDKLLQSKYESYMQTGCTSLKLIMKHFWTLISDTLRATPSVGVDITREERHLKCRTCCKQ
LKNLSNIVKNKASQVGRHGSAFKELQLLMAPLDDAV
NT seq 2091 nt   +upstreamnt  +downstreamnt
atggccgctgccaacgccaccaagatctcatggaggctgcaagagttcgaggctcactcc
agcagcgtttcctgtttggccctgggtaagaactctggccgcctgctggccaccggcgga
gaggactgccgcgtgaacatctgggctgtgagcaaagccaactgcatcatgagtctgact
ggtcacaagagcccagtggagtgtgtccagttcaacacgtcggaggagcaggtcgtcgct
ggttcacagtctggatcaatacgagtctgggacctggaggcggcaaagattttaaggact
ctgatgggacataaatccaacatcaccagtctgggcttccatccgttcggagatctcctt
gcctcaagctccatggacacaaacatcaagctgtgggacgtcaggaggaaaggatacgtg
ttcagggtcaagggtcacactcaggccgtgaggagtctggccttcagtcccgacgggagg
tggttggcttcagccagcgacgactccaccatcaagctgtgggacctggctcaggggaag
acgatcacagagttcaagtctcacaccgccgccgtcaacatcgtccagttccatcccaac
gagtacctgctggcgtcgggcagctgcgacagaaccatcaagttgtgggatctggagaag
ttcaccatgatcagctcgttggagggagacacgtcacccgtcaggtgtgcgttcttcagt
ccggacggcggctgtctgttcagcggagccaccgacactctgcgggtgttcggttgggag
ccggaccgctgcttcgacacggtgccggtgggatggggcaaagtgtcggacctcgccgtc
tgcaaccagcagctgatcggcgtctcccaccagctctccagcgtgtcgtcgtacgtcgtc
gacctgaagagggtaaagaagagcggtggctccgtaatccagggaatcgtccgggacaac
gagccgctcgctgagcccaaggatccgcgaggagccgccctgcgaaagagctacgcccga
ccctcgaccacctgcagctcgcagagggtgaagcagaggtcggagtctgagaggcggagc
cccgagggcgagaggcggagccccagcgaggacgagggagacgagaagttgtcgtcggcg
gagatccacaaccccgaggacttcaaggaaatcttccagcccaagaacgccatctctcgg
acgcctcccaagatgtcggagccttttcctgctccgccagaagacgagatcatactggcg
atcggccgtcagctgcaggacatgacgtgtccgtttcccgacaagcagcaggctccgccc
ctcgcctcctccactcccgtccagagggtggagcccaccgtggtctcctcagccgtgggt
cccgcctcctcctcctccaacccgcccgcctcccgcccgccgccacctcctcagcctccc
gtcaccacggcgaggaccagacctccacccaaaatcatcctgagcaccaggaacgagccc
atcggcctgaacgtggccgacttcctgccgccgtcggccaacagccgcccggcggcgctg
agcgacgaggacgagctgtcgcagatcaagaagggtcacgccaccatgtgcgtgatgctg
agcagccgacgcaagaacctggagacggtgcggatggcgtgggctcgagaggacgccaag
aacgctctggacatcgccgtctccatgagcgacctgtcgatcgtcgtggacattctcaac
atcctcaacctccaaccgtctttgtggaaactcgacctctgtacgacggttctgcctcag
atcgacaaactgctgcagagtaaatacgagagctacatgcagaccggctgcacgtcgctg
aagctcatcatgaaacacttctggacgctgatctccgacacgctgagggcgacgccgtcg
gtcggagtcgacatcacgcgagaggagcgacacctgaagtgcagaacctgctgcaagcag
ctgaagaacctcagcaacatcgtgaagaacaaggcgtcgcaggtcgggcgccacggcagc
gccttcaaggagctgcagctgctcatggcgccgctcgacgacgcggtctga

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