Scophthalmus maximus (turbot): 118301985
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Entry
118301985 CDS
T09850
Name
(RefSeq) nuclear receptor ROR-alpha A-like
KO
K08532
RAR-related orphan receptor alpha
Organism
smau
Scophthalmus maximus (turbot)
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smau03000
]
118301985
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
smau03310
]
118301985
Transcription factors [BR:
smau03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
118301985
Nuclear receptors [BR:
smau03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
118301985
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
118301985
NCBI-ProteinID:
XP_035483638
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Position
4:complement(507092..526216)
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AA seq
485 aa
AA seq
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MYFVISAMKAQIEIIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQSNAAYSCPRQKNCL
IDRTSRNRCQHCRLQKCVAVGMSRDAVKFGRMSKKQRDSLYAEVQKHRLQQQQQQQGPVL
LSHPGLGSPSPGEAEPPSPHYGLSSTGLTELPDELGGYLEQNSPDGRSVSSKADSGGEGG
GTFYLDIQPSPDQSGLDINGIKPEPLCDYGSGFFPYCSFSDGDASPTASSVAELDHLAHV
TSRSHLETCQYLREELQQMSWQNFLQDEVESYQSKPREGMWQLCAVKITEAIQYVVEFAK
RIDGFMDLCQNDQIVLLKAGSLEVVFVRMCRVFDSQNNTVYFDGKFAGPDVFKALGCDDL
IASVFDFAKSLCSLHLTEDELALFSSFVLLSADRTWLQDKLQVEKLQQKTHLALQHVLQK
NQRGDGVLHKLRCKVSALRSLCSRHTEKLSAFRAVYPDVVRTHFPPLYKELFGGELELTL
RADDD
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgtattttgttatttctgccatgaaagctcagattgaaataattccctgtaagatctgc
ggagacaaatcgtcagggatccactacggggtgatcacctgcgagggctgtaagggcttc
ttcagacgcagccagcagagcaacgccgcctactcgtgtcctcgccagaagaactgtctg
atcgaccggacgagccggaaccgctgccagcactgccgtctgcagaaatgtgtggccgtg
ggcatgtcccgggacgcggtgaagttcggtcgcatgtccaagaagcagcgggacagtttg
tacgctgaggtccagaagcatcgtctccagcagcagcagcagcagcagggtcccgtcctc
ctgtcccatccgggcctcggcagcccgagcccgggagaggcggagccgccgtccccccac
tacggcctctcctccaccggcctcacggagctgcccgatgaactggggggctacttggag
cagaactcccccgatggacgatcagtgtcatccaaggccgactccggaggagaaggaggc
ggtaccttctacctggacatccagccgtctccggaccaatcaggactggatattaacggc
atcaaaccggagccgctgtgcgactacgggtccggcttcttcccgtactgctccttcagc
gacggagacgcgtcgcccaccgcgtcgtccgtggccgaactcgatcacctggcccacgtc
acctccaggtctcacctggagacgtgtcagtacctgagggaggagcttcagcagatgagc
tggcagaacttcctgcaggacgaggtggagagctaccagagcaagccgcgggaggggatg
tggcagctctgcgccgtgaagatcaccgaggcgatccagtacgtggtggagttcgccaag
cgcatcgacggcttcatggatctctgccagaacgaccagatcgtgctgctgaaagctggt
tctctggaggtcgtcttcgtccgcatgtgtcgcgtgtttgactcgcagaacaacacggtt
tacttcgatgggaaatttgcaggtccggacgtcttcaaagctctaggctgcgatgatttg
atcgcgtcggtgttcgacttcgctaagagtttgtgttcgctgcatctgacggaggacgag
ctcgctctcttctcctccttcgtcctgctctccgcagaccggacgtggctgcaggacaag
ctgcaggtggagaagctgcagcagaagactcatctagctctgcaacacgtcctgcagaag
aaccagagaggagacggagttctgcacaagctcaggtgtaaagtctcagcgttgcgttcc
ctgtgcagtcggcacacggagaaactatcggccttccgagccgtttaccccgacgtggtt
cggacgcacttccctcctctgtacaaggagctgttcggtggcgagctggagctgacgctg
cgggcggacgacgactag
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