KEGG   Scophthalmus maximus (turbot): 118302061
Entry
118302061         CDS       T09850                                 
Name
(RefSeq) RNA polymerase II elongation factor ELL-like
  KO
K15183  RNA polymerase II elongation factor ELL
Organism
smau  Scophthalmus maximus (turbot)
Pathway
smau03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:smau00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    118302061
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:smau01009]
    118302061
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:smau03021]
    118302061
Protein phosphatases and associated proteins [BR:smau01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     118302061
Transcription machinery [BR:smau03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     118302061
    Little elongation complex (LEC)
     118302061
SSDB
Motif
Pfam: ELL Occludin_ELL UBR1-like_wing
Other DBs
NCBI-GeneID: 118302061
NCBI-ProteinID: XP_035483767
LinkDB
Position
4:18169005..18193616
AA seq 608 aa
MASLGQEQRYGLCCGTSGRTGPGATLYHVKLTDTAVKALEAYQQLKGSLPNEPSICFKGN
QGYIKIPAPTPESLSALRIFSFYLSSDSKDQPQASFDCIHQYVSSDGREQLEGQGIIQDK
ITVCATEDSYQMTRERMSQVEKDSWSRSAIEIKPGATHPSKCVKFHKRPAPASTSDSNFL
KQCTNNQRNGGMATPTQKPLRERIIHLLALKPYRKPELLLWLERERACPKDKAELGPILE
EVAKANPKDSSYLLRDDFYKHVQRDWPGYSEEERQLISRLLARKLQPQISNQFRSFQANA
SILKPSEDTALHHSTVKNPLVKRPVPFDSLERLAVKRQKLVDQRLQQQSTVNGLLKNKGH
DNATPTVNHSFHTKTEFRGTTNHSGNQNASPEGHDSFPVAHKLSGTSDTPVTGNREQEPK
GSDHQPPQGHSDCAHQQLTISQHRKKKSKKHKDKQRERLKDNKGSDCLVTSPDLKHSPEK
LENLDITKTVVSEEKPDFVLNYGPIMSLEQRKRYQEDFCAEYDEYKDLHSRIATITHMFV
QLGSKIKSLSPGTHDYKIMEDQILVKYNKYRKKFPGYREEKKRCEYLHEKLSYIKQLIID
YDVSQASS
NT seq 1827 nt   +upstreamnt  +downstreamnt
atggcttcgctcgggcaggagcagcgctacggcctctgctgcgggacgagcggccggacg
ggccccggcgcgacgctgtaccacgtcaagctcacggacacggcggtcaaggcactggag
gcttaccagcaactcaagggatcgttgccaaatgaaccgtcaatctgtttcaaaggaaac
caagggtacatcaagataccagctcccacaccagagtcgctgtctgctcttcgcatcttc
tccttctacttatccagcgacagcaaagaccaacctcaagccagcttcgactgcatccat
caatatgtctcaagtgacggccgtgaacagctggaaggtcagggcatcatccaggacaag
attaccgtgtgtgcgacagaggactcctaccagatgacccgcgagaggatgtctcaggtg
gagaaggacagctggagccgctctgccattgagatcaaacctggagccacacatccaagt
aaatgtgtgaagttccacaagaggccggctcctgcttctacgtcagacagcaacttcttg
aagcagtgtaccaataaccagaggaatggcggcatggccacgccgacccagaagcccctg
agggaacgcatcattcacctgctggctctgaaaccctacaggaagccagagctgctgctg
tggctggaaagagagagagcctgccccaaggacaaggctgagctgggtcctatactggag
gaggtggcaaaggcgaatcccaaagacagcagctacctgctgagggatgacttctacaag
catgtgcagagggactggcctggctacagcgaagaggagaggcagctgatcagcaggctg
ctggccaggaagctgcagccgcagatcagcaaccaatttagaagttttcaagcaaacgcg
tctatattaaagccctcagaggatacggcacttcatcacagcacagtgaaaaatccctta
gtgaaacgccctgtgccttttgactcactggagagactagctgttaagagacaaaaactt
gtggaccagaggttgcaacagcaatccactgtaaatggactcttaaaaaataaaggacac
gacaatgcaactcctacggtcaaccacagcttccacacaaagactgagtttcgagggacc
acaaaccatagtggtaatcagaatgcctcgccggagggccacgacagcttccctgttgcg
cacaaactgtccggcacctctgacacacctgtaacagggaacagggagcaagaacccaaa
ggaagcgaccaccagccaccgcagggtcactctgactgcgctcaccagcagctcactatc
agccagcaccgaaagaagaaatctaaaaagcacaaagacaagcagcgggagaggttaaaa
gacaacaagggcagtgattgtttggtgacgagtcctgatcttaagcacagcccggaaaaa
cttgaaaatcttgacatcacaaaaactgtggtctctgaggagaagcctgattttgtgctc
aactatgggcccataatgagtttggagcaacgtaagaggtaccaggaagatttttgtgca
gagtatgatgagtacaaagaccttcactcccggatcgccaccataactcacatgtttgtt
cagctaggctccaagatcaagagcctgtcgccgggcacacacgactacaagataatggaa
gaccaaatactagtaaagtacaacaagtatcggaagaagttcccaggctaccgggaggag
aagaaacgctgcgagtatctccatgagaaactgtcctacatcaaacagctcatcatagac
tatgatgtctctcaagcttcttcgtag

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