KEGG   Scophthalmus maximus (turbot): 118302075
Entry
118302075         CDS       T09850                                 
Name
(RefSeq) histone-binding protein RBBP7 isoform X1
  KO
K10752  histone-binding protein RBBP4
Organism
smau  Scophthalmus maximus (turbot)
Pathway
smau03082  ATP-dependent chromatin remodeling
smau03083  Polycomb repressive complex
smau04218  Cellular senescence
Brite
KEGG Orthology (KO) [BR:smau00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    118302075
   03083 Polycomb repressive complex
    118302075
 09140 Cellular Processes
  09143 Cell growth and death
   04218 Cellular senescence
    118302075
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:smau03036]
    118302075
Chromosome and associated proteins [BR:smau03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     118302075
  Histone modification proteins
   HAT complexes
    HATB complex
     118302075
   HDAC complexes
    Sin3A-HDAC complex
     118302075
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     118302075
    PRC2.2
     118302075
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     118302075
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    118302075
  Chromatin remodeling factors
   NuRD complex
    118302075
   NuRF complex
    118302075
   NuRF complex (fruit fly)
    118302075
SSDB
Motif
Pfam: WD40 CAF1C_H4-bd WD40_CDC20-Fz WD40_Prp19 Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd Beta-prop_EIPR1 Beta-prop_TEP1_2nd WDR55 EIF3I Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_WDR75_1st Beta-prop_EML WD40_MABP1-WDR62_2nd WD_LRWD1 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR19_1st WD40_RFWD3 Beta-prop_RIG_1st Beta-prop_DCAF12 ANAPC4_WD40 eIF2A WD40_MABP1-WDR62_1st Beta-prop_SPT8 Beta-prop_IFT140_1st MIOS_WD40 NBCH_WD40 Beta-prop_DCAF4 Beta-prop_WDR35_TULP_N
Other DBs
NCBI-GeneID: 118302075
NCBI-ProteinID: XP_035483805
LinkDB
Position
4:complement(28430874..28445795)
AA seq 427 aa
MADKEVYDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVRRPEGKDY
TVHRLVLGTHTSDEQNHLVIASVQVPNDDAQFDASHYDSEKGAEFGGFGSVSGKIEIEIK
INHEGEVNRARYMPQNPFIIATKTPTCDVLVFDYTKHPPKPDPSGECNPDLRLKGHQKEG
YGLSWNPNLSGNLLSASDDHTICLWDIGTGPKEGKSVDAKTIFTGHTAVVEDVSWHLLHE
SLFGSVADDQKLMIWDTRSNNPSKASHAVDAHTAEVNCLSFNPYSEFILATGSADKTVAL
WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAE
DGPPELLFIHGGHTAKISDFTWNPNDPWIICSVSEDNIMQVWQMAENIYNDEEPDNTPAS
ELEAQGS
NT seq 1284 nt   +upstreamnt  +downstreamnt
atggcggataaagaggtgtatgacgatgcagtggaagagagggtcatcaatgaggagtac
aaaatctggaagaagaacacacctttcctgtacgacctggtgatgactcacgcactggag
tggcccagcctcactgtccagtggctcccagacgtccgcaggccagaggggaaggactac
actgtccacaggctggtcttggggacccacacatcagatgagcagaaccaccttgtgatt
gccagcgtccaggtaccaaatgatgacgcccagtttgatgcctctcactatgacagcgag
aaaggagcagagtttggtggatttggttcagtcagtgggaagattgagatcgagatcaag
atcaaccacgagggagaggtgaaccgagcccgctacatgccccagaatcctttcatcatt
gccaccaagactcccacgtgtgacgtcctggtctttgactataccaagcacccacctaag
ccagatcccagtggggaatgcaatcctgacctgagactgaagggtcaccagaaagaaggc
tacggtctctcctggaatcccaacctcagtggcaacctgctcagtgcctccgatgaccat
accatctgtctatgggacattggtactggcccaaaggaaggcaagagtgtggacgccaag
actatcttcaccggccacaccgcagtggtggaagacgtctcctggcatttgctccatgaa
tccctgtttggctcggtggctgacgaccagaagctcatgatatgggacactcggtccaat
aacccgtccaaagccagccatgcagtcgacgctcacaccgctgaggtcaactgtctgagc
ttcaacccctacagcgagttcattcttgccactggttctgctgataagactgttgcattg
tgggacctaaggaacctcaaactgaagctccactcctttgagtcccacaaagatgaaatt
ttccaggtgcagtggtctcctcacaacgagacgatcctggcctccagcggcaccgaccga
cgcctcaacgtctgggatctcagtaaaattggggaagagcagtcggcagaagatgcagag
gatggtccaccagagctgctgttcattcacggaggccacacagccaagatctccgacttc
acctggaaccccaacgacccctggatcatctgctcagtgtccgaggacaacatcatgcaa
gtctggcagatggcagagaacatctacaacgatgaagagccagacaacacccctgcgtca
gagctggaggctcaaggatcttaa

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