Scophthalmus maximus (turbot): 118302161
Help
Entry
118302161 CDS
T09850
Name
(RefSeq) LIM domain only protein 7-like isoform X1
KO
K06084
F-box protein 20
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
118302161
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
smau04121
]
118302161
Ubiquitin system [BR:
smau04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
118302161
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4757
CH
PDZ_6
PDZ
TECR_N
Motif
Other DBs
NCBI-GeneID:
118302161
NCBI-ProteinID:
XP_047187459
LinkDB
All DBs
Position
4:9503491..9573811
Genome browser
AA seq
1288 aa
AA seq
DB search
MELMEWRQQTSVSCADAFVEAQRWIQEATGKLFGCNDFRTALENGVLLCDLINKLKPGII
RRVNRLSTPIAGLDNVTVFLKACGELGLNESQLFHPGDLQDLSTRVTLRRDESNRRLKNV
LITIYWLGRKAHLDAFYSGPPLNFKAFEGLLGLALSKALDDGTNAFVKDGEYRECWYPER
EERQRTSYRGENSVDSVDSLDSRALRPNSEGCGSDTEAEQVFRMEASVHQNKGYIPPPLL
RRKPGRDENGRVCTGPLTRKYVNQVRPETPVQVNPGWIWSKSLSDIPMVYPVRKFPKENT
VRNVGQDANTARDCSEENSERSSAAAKDSEAQWQDDLTKWKNRRQSFKTDSRRKSLDREH
VINQMTNGAVDNFGKSGAQVRAMLKRDQHTPRRNTPAPRPNPTPPPSKSSSSDLRPRTRV
VLARSYATEARFNPKATLIPHNSTQTRGSSVGAMPASDGNILGEETHFSSLASDGAAVTT
PSLECPFSSQTQVKAQCGPDPFMPTSEVAQPEKIFKKQISTLVTTLQPKETTKPTITKHL
TASALSHTELPFCVDAKAPTFPVDAIDQMPKKGSNKTSWEPALEHDRGPQAVVVYKYLSR
TASWSGSASLPRGYRRSEGSSRLSSAITARPYGTKQSRVSSLPRLCSVDDDHGLLLNREK
DTILSPPAKSSLKRQTAASHLRGQYEASLRQKKANQAKQNGTEQAEVGKGPRLSSQTSFK
TNGYHHKPYTQTQILQKPYSKPQPHRDKSLTLPSAKLDHSNMRVSLTLKPNSIPDFGFQT
HWDSTGARVKFTEPGSPAELCQLCVDDEIVAVDGVAVAHMNYNQWKDKMTSALQTGSLTM
DIRRYGNTDWSSSEGSHRNQPGQSRVTLNLTASAPVLIGCPDHHANSTTSTETTAPVALK
FNGQTDNVVHSKVMDRGLADSHRTATSKDYDRIIRKNQKRRAEFFKQKGGSESAISDLHV
PSLSPSSSSWSWDHEGDRRRQEKWQEEQERLLQEQYQRDQERLEAEWQRAQQDADGDLCR
KSGNPFQMTNGGEGPASTQLHVYALTNKTREEEQSPDGDELKEAGSESQGDAQGAKSDVA
EQDWAVESCGFAQLSPAHRAKSLSTPALAGCHKRTKGDQRKRKGQSLSKTEHQRQQILEE
MKKRTLLLTDNSWIRQRSSSFYKEPVYVGVPVKRYESLDDLDALRQSPVSASTWGYPRPH
SAAAGYYAPSRNASSRYSTGAILSRRNASMDPPHHGSVWAATDISEELKLESKFVSERGR
PTVSSAISKSSMLVAPPCGRRAVFQITD
NT seq
3867 nt
NT seq
+upstream
nt +downstream
nt
atggagttgatggagtggcgccagcagaccagcgtcagctgtgcggacgcgttcgtcgag
gctcagcgctggattcaggaggcgactggaaaattgtttggttgcaatgacttccgcact
gccttggagaatggagtcctgctttgcgatctgatcaacaagttgaaacctggcatcatt
aggcgagtaaacaggctttccacacccatcgctggcctggacaatgtgaccgttttcctg
aaagcctgtggggaactgggactgaatgagtcgcagctgtttcacccaggagacctgcaa
gacctgtccactcgcgtgacactcaggcgagacgaaagcaacagaagactcaaaaatgtt
ctgatcaccatctactggttgggccgcaaagctcaccttgacgcattctacagtggccct
ccgctgaacttcaaggcctttgaaggactgttggggttggccttgtccaaggccctagat
gatggcaccaatgcatttgtgaaagacggcgagtacagagagtgctggtacccggagagg
gaggaacgtcagcgtacgagctataggggagagaactctgtggacagtgttgactctctg
gactcccgagcccttcgcccaaacagtgaaggttgtggaagtgacacagaagcggagcag
gtcttcaggatggaggcctcagttcatcaaaacaaaggctacatcccaccaccactgctc
cgaagaaaaccaggacgagatgagaatggaagggtctgcaccggtccactcacaagaaaa
tatgtaaaccaggtcaggcctgagacaccggttcaggtcaaccctggctggatttggagt
aaatcactcagcgacatcccgatggtctaccctgtgcgtaaatttcctaaggagaatacc
gttcgcaatgtgggccaggacgcgaacacggcaagggattgtagcgaagaaaactcagag
aggagcagcgccgctgccaaggacagtgaggctcagtggcaggatgacttgacaaagtgg
aagaatcgtcgccagagcttcaagactgacagccgcaggaagtcgctggacagagagcac
gtcatcaaccagatgaccaatggggctgtggacaactttgggaagagtggcgcacaagtc
agggcaatgctaaaaagagaccagcacacaccacgcaggaatacccccgccccccgtcct
aaccccacccctcctccatcaaaatcatccagctctgatctccggccacgtactcgagtt
gtgttggcccgcagctacgccactgaagcacgtttcaaccccaaggctacacttatcccc
cataactcaacccagactcggggatcatcggttggggccatgcctgcctctgatgggaac
atcttgggagaggagacccacttttcctccttggcttcagatggagcagcagttaccaca
ccttctctggaatgccctttcagctctcagactcaagtcaaagctcagtgcggaccagat
cctttcatgcccacatctgaagtggcccaaccagaaaaaatcttcaaaaaacaaatctcc
accctggtcacaaccctgcagccaaaggagaccacgaaaccaaccatcaccaagcacctc
actgcatctgcgttgagtcacacggaacttccattctgcgttgatgcaaaagctccaact
tttcctgttgatgcgattgatcagatgcccaagaaagggagcaacaaaacctcttgggaa
ccagctcttgagcacgatagaggtccgcaggctgtagttgtctacaagtacttgtctaga
actgcgtcgtggtccggctcggccagccttccgcgtgggtaccggcggtccgagggctcg
tcccgtctttcttctgcaatcaccgctagaccctatgggaccaaacagtcgagggtgtcg
tccctgccgagactgtgcagtgtagatgacgaccatggtttgctgttgaacagagagaaa
gacacaattctttctccacccgccaaatcttcgctcaaaagacagacggcggcgagccac
ctgaggggtcagtacgaggcgtcactcagacagaagaaagccaaccaggcaaagcagaat
ggtacagagcaggcggaggtggggaaagggccccgtctctccagccagacctccttcaag
accaacggctatcaccataagccctacacccaaacccagatactacaaaaaccttattca
aaaccacagccccaccgcgacaaaagcttgactctgccctctgcaaagctggatcacagt
aacatgagagtgagcctcacccttaaacccaacagtataccagacttcggtttccagact
cactgggactcgaccggggcgagagtaaaattcactgaacccggcagtccagcagagctc
tgccagctgtgtgtggatgatgagattgtggctgttgatggagtggcggtggcacacatg
aactacaaccagtggaaggataaaatgacatctgccctgcaaactggcagtctgaccatg
gacattagacgctatggcaacacggattggagctccagcgaggggagtcatcgcaaccag
ccaggccagagcagagtgaccctcaatctgactgcctctgcacccgttctgataggttgt
cctgatcaccatgccaacagcaccacctctacagaaaccacagcccctgtagcattgaaa
ttcaatgggcagacagacaatgtcgttcacagtaaagtcatggatcgagggcttgctgac
agccacaggacagccacaagtaaagactatgatagaattattagaaaaaatcagaaaagg
agggccgagtttttcaaacagaaaggaggttcagaatctgcgatatctgatctgcatgtg
ccgtccctcagcccctcctcatccagctggtcgtgggaccacgagggggatcggcgacgt
caggagaagtggcaggaagagcaggagcgcctcctacaggagcaataccagcgggaccag
gagaggctggaggcggagtggcagagggctcaacaggatgcagacggagacttgtgcagg
aagtcggggaacccctttcagatgaccaatggtggcgagggccctgccagcacgcagctc
catgtgtatgcgttgacaaacaaaaccagggaagaggagcagagccccgacggagatgag
ctgaaagaagcaggatcggaatctcaaggtgacgcacaaggagcgaagagcgacgtcgcc
gagcaagactgggctgtggaatcctgtggctttgctcagctgtctcctgcacacagggcg
aagtccttgtctaccccagcgttagctggctgccacaaaaggacaaagggtgatcagagg
aaaagaaaaggacagtcgctctctaagactgagcatcagaggcagcagattttggaggag
atgaaaaaaaggaccctcctactgaccgacaacagctggatacgccagcgcagcagcagc
ttttacaaggagccggtctatgtcggcgttcctgtgaaaaggtacgagtccctggacgac
ctggatgctctgcgtcagtccccagtctcggcctccacgtggggttaccctcgtccacac
tcggcggctgcgggttactacgctccgagcaggaacgcctcctcccgctacagcactgga
gccattttatcccggagaaacgcatccatggaccctcctcatcatggcagtgtgtgggct
gccaccgacatttctgaggaactgaaactggagtcgaagttcgtctctgaaaggggaagg
cctactgtgagctctgccatttccaagtcaagtatgctggtggctcctccatgtggccga
cgtgccgtgttccagattacagactaa
DBGET
integrated database retrieval system
