Scophthalmus maximus (turbot): 118302172
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Entry
118302172 CDS
T09850
Name
(RefSeq) TATA-box-binding protein
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
118302172
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smau03000
]
118302172
03021 Transcription machinery [BR:
smau03021
]
118302172
Transcription factors [BR:
smau03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
118302172
Transcription machinery [BR:
smau03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
118302172
RNA polymerase III system
TFIIIB
118302172
RNA polymerase I system
SL1/TIF-1B
118302172
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBP
Motif
Other DBs
NCBI-GeneID:
118302172
NCBI-ProteinID:
XP_035484004
LinkDB
All DBs
Position
4:complement(15993417..15999314)
Genome browser
AA seq
304 aa
AA seq
DB search
MDQNNSISAFQGLASPQGAMTPGMPIFSPMMPYGSGLTPQPVQNTNSLSILEEQQRQQQQ
AQQQQAQQANTGLPGTSGQTPQLFHSQTVAGSTTTALPGNTPLYNTPLTPMTPIAPATPA
SESSGIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFS
SGKMVCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVL
THQQFSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGF
RKTT
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atggaccagaacaacagtatatcagccttccaggggctggcctcccctcagggtgccatg
accccaggcatgccaatcttcagtccaatgatgccatatggctcaggactgacaccccag
ccagtccagaacaccaacagtctgtctatactagaggaacagcagaggcaacaacaacag
gcacaacagcaacaggcgcagcaggccaacacaggtcttccagggacgtcggggcagacc
cctcagcttttccattcccagacagtagcaggctcaaccaccacagcgctaccagggaac
accccgctctacaacaccccacttactcccatgacccctatcgcaccagccacacctgcc
tcagaaagctctggaatagtgccacagctacaaaacatcgtatctactgtaaatctgggc
tgtaaactggacttgaagaccatcgccctgagagcgaggaatgcagagtacaacccaaag
cgttttgccgctgtcatcatgagaatacgagaacccagaaccactgcccttatcttcagc
tctgggaagatggtttgcactggagcaaagagtgaggagcagtcgaggttagcagccagg
aagtatgctcgtgttgtgcagaagcttggtttccctgccaagttcctggacttcaaaatt
caaaacatggtgggcagctgtgacgtgaagttccccatccggctggaaggattagtcctc
acacatcaacagttcagcagttatgagccggagctgtttccagggctgatttacagaatg
atcaaacccagaattgtcctgctcatctttgtttctggtaaagttgtactcacaggtgcc
aaggtgagagcagagatctacgaagcgtttgaaaacatctaccccatcctaaaaggcttc
cgcaagacgacgtag
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