Scophthalmus maximus (turbot): 118302179
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Entry
118302179 CDS
T09850
Symbol
cdh16
Name
(RefSeq) cadherin-16
KO
K06810
cadherin 16, KSP-cadherin
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
118302179 (cdh16)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
smau04515
]
118302179 (cdh16)
Cell adhesion molecules [BR:
smau04515
]
Cadherins
Major cadherins
118302179 (cdh16)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_FAT4_N
Ig_CLSTN
Cadherin_CELSR2_9th
Ig_Cad99C_N
Big_9
REC-like_halo
InlK_D3
Protocadherin
Motif
Other DBs
NCBI-GeneID:
118302179
NCBI-ProteinID:
XP_035484014
UniProt:
A0A8D3BIU1
LinkDB
All DBs
Position
4:9687031..9711366
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AA seq
823 aa
AA seq
DB search
MAARGATTMLIIALILVILYTLAPCSGANVKIGVPENYDGIFPWYLAKLHSLPGNYSDLV
VTGDDEGIFGVDAQFLYALKPLDREKQPSYSLQVSFRASVHQQSFTVEVCVIDKNDNVPT
FIEESMRGSVQLGLLKGIPFMQVEAVDRDDLNTAHADLRFSLMEQTPRIPSSQMFSIHPI
TGEVSLTEEGASTLDPEMCGRYKLSVMVKDMAGKANAFFTTGIVTVEVTGNTWASPDPVR
LQENLPGPYPIPISQVKWSGSQAEYSLEGEFPEMLFTISREGVIYLNAPLDRETQDQFQI
SIVVERPDGREIAKPVELRVMVGDANDNRPTFPQAQYHTVVKELAARGTEILTVQAADND
DPKTDNVRIFYRLVGQIPESPRALFRVDRDSGVISVQADSMEGTAPQYTLTITAEDAKGL
NSSCTVVVTVQDENNNPPVFSQHEYGPFHILEDAPVGTTVTAVLAGDADVRGGVSWQVDY
RLESGNEEEVFTLMTDKQTNEVSLVLSKVLDFERESEYILVLSAHNPVALVRGRYGPAST
ATVSIYVDDVNEGPILSQSHYEVTVREGEEPGRVIATIRGYDPDSHPIRYSLQGDTKKYF
SIGKYSGELKTVQALDREENSTYTMEVIAVDGRNSSLSASTLVTVQILDVNDNSPVLVGD
YSWKYLCTPRWEDQALVLASRDSDGPQHGGRLNFSLRSDATVRRNWKLTPINDTHTNLSL
NIPYLAPEVYTVPFTISDSSSPPRSTFINLPVTVCPCNVRGNCKMAAKQLQGMPTIQSAV
GILLGTFAVIGTILVVVFVRLSYQNPKRTSKSNQERVPLKTSI
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgagaggagctacaacgatgctgatcatagctctcatactggtgatactttac
acattagcaccctgctccggggcaaatgttaaaattggcgtccctgaaaactacgatggt
attttcccgtggtatctagccaagctccatagcctgcctggtaactacagtgacctggtg
gtaacaggtgatgatgaggggatattcggagtcgacgctcagtttctctatgctctgaaa
cctctggacagagagaaacagccatcttactctctgcaggtttccttcagagcgtcggtg
caccaacagagcttcaccgtcgaagtgtgtgtcatcgacaagaacgacaatgtgcccact
ttcatagaggagagcatgaggggcagcgtgcagctcgggcttctcaaagggatcccattc
atgcaggtggaggcggtggatcgcgacgacctcaacactgcccatgccgacttgcggttc
agcctcatggagcagacacccaggatcccctccagtcaaatgttctccatccaccccatc
actggagaggtttccctcaccgaggaaggagcctctactctggacccagagatgtgtggc
cgttataagctctcggtgatggtgaaggacatggctgggaaggcgaatgctttcttcacc
actggcatcgtcaccgtcgaggtgactggaaacacttgggcatcccccgaccctgtgcga
ctccaggagaacctcccggggccctatcccatccccatctcacaggtaaaatggagtgga
agtcaggcggagtacagtctggagggggagtttccagagatgctcttcaccatcagtaga
gaaggagtcatttatctcaacgcccctctggacagagagacacaagaccagttccagatc
agcattgtggtcgagcgtccagatggcagagagattgccaagccggtggagttgagggtg
atggtgggcgacgccaatgataacagacccacctttccacaagcacagtaccatactgtg
gtgaaggaactggctgctcgaggaacagaaatcctgacagtgcaggcagccgataacgac
gatcccaagacagacaacgtgcggatcttttaccgtctagtcggacaaattcccgagagt
ccccgtgccctcttcagagtggaccgtgactcgggagtcatctctgtccaagccgacagt
atggagggcacagctccacagtacaccctcaccatcactgccgaggacgccaaaggtctt
aacagttcctgcactgttgttgtgacggtgcaggatgagaacaacaacccaccagtcttc
tcccaacatgagtatgggcccttccacatcctggaggatgccccggtgggcaccacagta
acagctgtgctggcaggggatgccgatgtccgtggaggagtcagctggcaggtggactac
cgtttagagtctggaaacgaggaggaggtcttcacactgatgacagacaagcagaccaac
gaggtctcacttgtgctctcgaaggtgctggactttgagcgcgagagtgagtacatcctg
gtgctcagcgctcacaaccctgtggccttggtccgcggccgatacgggccggcgtccacg
gcaaccgtctccatttatgttgacgatgtgaacgagggtccaatcctgtctcagagccac
tacgaggtgaccgtcagagagggcgaggaaccgggacgggtcattgccaccatccgaggt
tatgaccccgattctcacccgatcagatattctctccaaggggacacaaagaaatacttt
tcaatagggaaatactctggagaactaaagactgtgcaggccttggacagggaggagaac
agcacgtacaccatggaggtcattgcagtggatggaagaaactcttccttatctgcgtcc
accctggtgacggtccaaattctggatgtcaatgacaacagtccggtgctggttggcgac
tactcctggaagtatctgtgtacgccccgctgggaggaccaagctctggtgctggcctcg
cgggacagcgatgggccgcagcacgggggacggctcaacttctctctgcgcagtgatgcc
acggttcgacggaactggaagctaacacccatcaatgatactcacaccaacctgtcctta
aacatcccttacctggcccccgaggtctatacggtgcccttcaccatttcagatagcagc
tcccctcccaggagcaccttcataaacctgccagtgacagtgtgcccctgcaatgtcaga
ggcaactgcaaaatggctgccaaacaattgcagggcatgccaactattcagtctgcggtg
ggcattctgcttggcacctttgcagtcataggaactatcctggttgtcgtgtttgtgaga
ctgtcctaccagaaccctaaaaggacgagcaaatctaaccaggagagagttcccctgaag
acttcaatctaa
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