Scophthalmus maximus (turbot): 118302189
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Entry
118302189 CDS
T09850
Symbol
tpcn2
Name
(RefSeq) two pore channel protein 2
KO
K14077
two pore calcium channel protein 2
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau04020
Calcium signaling pathway
smau04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
118302189 (tpcn2)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
118302189 (tpcn2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
smau04040
]
118302189 (tpcn2)
Ion channels [BR:
smau04040
]
Voltage-gated cation channels
Calcium channel, two-pore (TPC)
118302189 (tpcn2)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
Motif
Other DBs
NCBI-GeneID:
118302189
NCBI-ProteinID:
XP_047187529
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Position
4:complement(26929171..26952402)
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AA seq
769 aa
AA seq
DB search
METDTLLGESVNAAPQDYGSHPGRPVAGPDGAPGRRRPSYSVAGGGSCRVESGAGDDDLY
VQQAVVFIEDAIQYRSINHRVDASSLCLYRWYYSRICQWGLGLTIAALLLLAFVERPSSL
SVSSDGRHRSPPWEPPCGFTESIEMVCLLIFCLDLAVKSYLIGWDEFRKGKWLIGYTVVL
SFSIIDWVLSVSMVCDERLRVRRLLRPFFLLQNSTLMKKTLKCIKRTLPEIASVILLLAL
HLCLFTMIGMLLFAKTDDPKRNGEWELHFRDLPQSLTSLLVLLTTANNPDVMIPAYSLNR
GYAVFFVTFSVIGTYCLMNLLTAIIYNQFRGYLLMSVQTSIIRRRLGIRAAFQVLGCRGA
QHSTEDEQVGVDAVLEAMSRVQMKTYCRAAITTEVQRYADVGHMDREQFRKIFDELDKDR
IKEHPPLPQYNSPVLQRLQMIFSHYYLTILGNAVALANVMCICTVLVLNSEKSTAERDNF
LLEIINLCFILYYVFEMCVKIFAFGWRGYLSYRNNIFDGFLTVLLLGLQILIYATYRLPH
AHWDPSSHLMSLWEMIRLVNMLIVFRFLRIIPDIKLMALVASTLLDLVKNLRAFAGILVV
VYYVFAVFGIWLFEGAIKPPPEMSVISNTTMENITSNFSMECGTYEQLSYWSNNFDDFAA
SLILLYNVMIVNNWQAFMEAYSRYTSDWAKVYFVCWWLTSSVMWVNLFVALILENFIYRW
DRSHSCSVTDVERIRYETSLQLIFKEQIQEPTEEELTCQLHQHPHLHLH
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atggaaacggacactctgctgggcgagtccgtaaacgcagccccgcaggactatggctcc
cacccaggccgtccggtcgcggggcccgacggggcccccggcaggaggcggccgtcgtac
tcggtcgccggcggggggtcgtgcagagtcgagagcggagcaggggatgatgacctctac
gttcaacaagctgttgtcttcatagaggatgccatacagtaccggtccatcaaccacaga
gtagacgccagttcgctctgcctgtatcgatggtactactcgcggatatgccagtggggc
ttgggtctgaccatcgcagcgttgctgttgctggcctttgtggagcgtccgtcctccctg
tccgtctcgtccgacggccgtcaccgctctccgccttgggagcctccctgtggcttcacc
gagagcattgagatggtctgtctcctcatcttctgccttgacctcgccgtcaagagctac
ttgattggctgggacgaattcaggaagggcaaatggctaattggctacaccgtcgtcctt
tcattctccatcatcgactgggtgctgtctgtcagcatggtgtgtgatgagagactgaga
gtgcggcgactcctccggcccttcttcctcctgcagaactccaccctgatgaagaagaca
ctgaagtgcatcaagagaacgctgccagagattgccagcgtcatcctgctgctggcgctc
cacctctgcctcttcaccatgatcggcatgctcctgtttgctaaaacggatgatccgaag
aggaacggggagtgggagttacacttcagagacctgcctcagtctctcacctctctactg
gtgctgctcaccacagccaacaacccagacgtgatgatccccgcctactcgctgaacaga
ggctacgccgtcttctttgtcaccttcagtgtgatcggaacctactgtttgatgaacctt
ctgacagccatcatttataaccagttcaggggatatttgctcatgtcggtccagacgtcc
atcatcaggagaagactggggatccgtgctgctttccaagtcctcggctgccggggagcc
caacattccactgaggacgagcaggttggtgtcgatgcggtgctggaggcgatgtccaga
gtccagatgaagacctactgcagagcagccatcaccacggaggtgcagcggtacgcagac
gtggggcacatggaccgagagcagttcagaaagatctttgatgaactggataaagatcgc
atcaaggagcaccctcccctgcctcagtacaactctccagtcctgcagagactccagatg
atcttcagtcactactatctcactatacttggcaatgcagtggctttggccaatgtcatg
tgcatatgtactgtcctcgtattgaactcagaaaagtcgactgcagagcgagacaacttc
ttgttggagatcatcaacctgtgcttcatcctctactacgtatttgagatgtgtgtgaag
atcttcgccttcggttggagagggtacctctcctacaggaacaacatcttcgatggcttc
ctcaccgtcctgctactgggtctacagatccttatttatgccacctacaggcttcctcat
gctcactgggacccgtcctcccatttgatgtctctgtgggagatgattcgtttggtcaac
atgctgatcgtcttccgcttcctgcgcatcattccggacatcaagctcatggccttggtt
gcgagcacactgctggacctggtgaaaaacctccgggccttcgcagggatactggtggtg
gtgtactatgtgttcgctgtgtttgggatctggctgttcgaaggggccatcaaacctcct
ccagagatgagtgtgatctccaacaccaccatggagaacatcacctctaacttcagcatg
gagtgtggaacctatgagcagctcagctactggtcgaacaacttcgatgactttgctgcg
tccctcattttgctatataatgtcatgatagtcaacaactggcaggctttcatggaggcg
tacagcagatacacctcagattgggccaaagtctactttgtgtgttggtggctcacctcg
tccgtcatgtgggtcaacctgtttgtggcgctcatcttagagaacttcatctacaggtgg
gaccgcagtcacagctgctctgtaacagatgtggagaggatccgatatgaaacctctctt
cagctcatattcaaggagcagatccaggagccgacagaggaggaattaacctgtcagcta
caccaacacccacacctccacctgcactag
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