Scophthalmus maximus (turbot): 118302258
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Entry
118302258 CDS
T09850
Symbol
lrp4
Name
(RefSeq) low-density lipoprotein receptor-related protein 4 isoform X1
KO
K20051
low-density lipoprotein receptor-related protein 4
Organism
smau
Scophthalmus maximus (turbot)
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smau04131
]
118302258 (lrp4)
Membrane trafficking [BR:
smau04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
118302258 (lrp4)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_b
Ldl_recept_a
FXa_inhibition
SGL
Vgb_lyase
cEGF
EGF_LRP2
EGF_CA
Motif
Other DBs
NCBI-GeneID:
118302258
NCBI-ProteinID:
XP_035484167
LinkDB
All DBs
Position
4:complement(3129523..3240007)
Genome browser
AA seq
1918 aa
AA seq
DB search
MQLVAVLCGALITSLLRQSPGVQGSAECSCGRNHFTCAVSAFGECTCIPAQWQCDGDNDC
GDHSDEDGCMLPTCSPLDFHCDNGKCIRRSWVCDGDNDCEDDSDEQDCPPRECEEDEFHC
QNGYCIRSLWHCDGDNDCGDNSDEQCDMRKCSDKEFRCTDGSCIAEHWYCDGDTDCKDGS
DEENCPSDVMTATCSVEEFQCAYGRCILDIYHCDGDDDCGDWSDESDCSSHQPCRSVEFM
CSSGMCINAGWRCDGEYDCDDQSDEKNCTTSMCTADQFRCGTGRCVRLSWRCDGEDDCSD
RSDEEGCEKTETPPCAPDQFQCGNGRCIGQRKVCNEVNDCGDGTDELPHHDCRPRSSEGN
CNQNNGGCSQKCQMVRGLVQCTCHTGYRLMDDGKACQDVDECAEEGYCSQGCTNTEGGFH
CWCVQGYELRPDKRSCKALGPEPVLLFANRIDIRQVLPHRSEYTLLLNNLENAIALDFHH
NLELVFWSDVTLDRIMKANLNGSNVEEVVSTGLESPGGLAIDWIHDKLYWTDSGTSRIEV
ANLDGTQRKVLLWQNMEKPRAIALHPIEGKIYWTDWGNTPRIEYSNMDGSNRRVIADTHL
FWPNGLTIDYAGRRMYWVDAKHHVIERADLDGRNRKAVISQGLPHPFAITVFEDSLYWTD
WHTKSINSANKFTGKNQEIIRNKLHFPMDIHTLHPQRQPAGGRNRCGTNNGGCSHLCLPS
NKTYTCACPTGFKKMDHHSCANGLDKFLLFARRTDIRRISFDTEDMSDDVIPLADVRNAV
ALDWDAKDGYVYWTDVTTDSINRALWNGSKQEVVVDTSLESPAGLAIDWVTSKLYWTDAG
TDRIEVSNADGSMRTVLIWENLDRPRDIVVDPIGGFMYWTDWGANPKIERAGMDASSRIV
IISSNLTWPNGLAIDYETQRLYWADAGMKTIEFGNFDGSDRQVLIGSQLPHPFGLTVHDD
KLYWTDWQSKSIQSADKLTGLGRHTLAENLENLMDIHMFHRHRDTVRNPCAVNNGGCSHL
CLLAPAPKASSCACPTGINLQSDGKTCTSGMSSFLIFARRTDIRMVSLDIPYFADVVLAV
NSSMKNTIAIGVDPQGAKVYWSDSTLKKISRANFNGTEYEDIISTGLVTTDGLAVDARGR
KIYWTDTGTNRIEAANLDGSMRKVLVWQNLDSPRAIALYHEMGYMYWTDWGEHAKLERSA
MDGSDRVVLISNNLGWPNGLAIDMAGSQLLWADAHTERIEAADLNGQNRHTLVTPVQHPY
GLTLLGPHIYWTDWQSRSIQRADKNTGANTITVRANLPGLMDIQAVDRERPMGFNKCGRR
NGGCTHLCLPRPNGTSCACPTGILLKGDGRSCDDSPETYLVFSNRVSVRRISLDTNDHTD
VHVPVPELHNVISLDYDSVDGKLYYTDVTLDVIRRANLDGSGMETVISQGLKTTDGLAVD
WVSRNMYWTDTGRNTIEVARLDGTCRKVLVNNSLDEPRAIAVFPSKGFLFWTDWGHIAKI
ERSHLDGSDRKVLINTDLGWPNGLTLDYDTRRIFWVDAHLDRIESSDLNGKLRQILVSPV
SHPFALTQLKPVSSPLTPFSRLSQQDRWIYWTDWQTKSIQRVDKHTGRNKETVLPNVEGL
MDIIVVSPHRQTGTNLCGVSNGGCTHLCFAKTNTFVCACPDEPDGRPCSTISGYIPTSPA
RGTSSTPVPNKIPNAPTDTPHRGPTLVNCTDKNLSVEGCSSNVVTAPHGEGLHISYVIGG
VLTILAILILIAALIIYRHKKSKFADPGVSNLTYSNPSYRTSTQEVKIEASQKPPIYNQL
RYKKEGGVDGGYTKEKIRIVEGVCLLSHEELYWDDLKQIKPSRGGLHTCMRTDTVSLQAS
SASLDDGETEQLLQEEASECSSIATLTPSAITPQRHAQHSLPDTGWTSTRKPSTESEV
NT seq
5757 nt
NT seq
+upstream
nt +downstream
nt
atgcagctggtcgcggtgctgtgcggagccctgataacttcgctgctccgccagagtcca
ggtgttcagggcagcgccgagtgctcgtgtgggaggaaccacttcacgtgcgcggtcagc
gcgttcggggagtgcacctgcatcccggcccagtggcagtgtgacggggacaacgactgc
ggcgaccacagcgacgaggacggatgcatgctgcccacatgttcgccactcgacttccac
tgcgacaacggcaaatgtatccgtcgctcctgggtgtgtgacggagacaacgactgcgag
gacgactccgacgagcaggactgtcctcccagggagtgcgaggaggacgagttccactgc
cagaacggctactgcatccgcagcctgtggcactgcgacggcgacaacgactgcggcgac
aacagcgacgaacagtgcgacatgcgtaaatgttcggacaaggagttccgctgcactgac
ggcagctgcatcgccgagcactggtactgcgacggagacacggactgcaaggatggatcg
gatgaggaaaactgcccctccgacgtgatgacggccacctgcagcgtggaggagttccag
tgtgcgtacggacgctgcatcctggacatctaccactgcgacggcgacgacgactgcggc
gactggtcggacgagtcggactgctcctcccaccagccgtgcagatccgtcgagttcatg
tgcagcagcgggatgtgcatcaacgccggctggaggtgcgacggcgagtacgactgcgac
gaccaatcggatgagaagaactgcaccacgtccatgtgcacggccgaccagttccgctgc
gggaccggacgctgcgtgcggttgtcgtggcgatgcgacggtgaggacgactgctcggat
cgcagcgacgaagagggctgcgagaagaccgaaactcctccatgtgctccggatcagttc
cagtgtggcaacggacgctgcatcggtcagagaaaggtgtgcaacgaggtcaacgactgc
ggagacgggaccgacgaactgccgcaccacgactgccggccgcgctccagcgagggcaac
tgtaaccagaataatggaggctgctcccagaagtgtcagatggtcagaggactggtccag
tgcacctgtcacactggataccggctgatggacgacggcaaagcctgccaggatgtggac
gagtgcgccgaggagggctactgcagccagggctgcaccaacacggagggggggttccac
tgctggtgcgtccagggctacgagctccgacccgacaagcgcagctgcaaagctctgggt
ccagagccggtcctgctgttcgccaaccgcatcgacatccggcaggtgctgccgcaccgc
tccgagtacacgctgctgctcaacaacctggagaacgccatcgccctggacttccaccac
aacctggagctggtgttctggtccgacgtgaccctggaccgcatcatgaaggccaacctc
aacggctccaacgtggaggaggtcgtctccaccggcctggagagcccaggtggactggcc
atagactggatccatgacaagttgtactggacggactcggggacgtcccgcatcgaggtg
gccaacctggacgggacgcagcgcaaggtgctgctgtggcagaacatggagaagccccga
gccatcgcgctgcaccccatagagggtaagatctactggaccgactggggcaacacgcct
cgcatcgagtactccaacatggacggctccaaccggcgggtcatcgctgacacgcacctg
ttctggcccaacggcctcaccatcgactacgccggccgccgcatgtactgggtggacgcc
aagcaccatgtcatcgagagggccgacctggacggacgcaaccgcaaggccgtcatcagc
caaggcctgccgcacccgtttgccatcacggtgttcgaggacagcctctactggaccgac
tggcacaccaagagcatcaacagcgccaacaagttcaccggcaagaaccaggagatcatc
cgcaacaagctgcacttccccatggacattcacaccctgcacccgcagcggcagcccgca
ggcggcaggaaccgctgcggcaccaacaacggaggctgcagccacctgtgtctccccagc
aacaagacgtacacctgcgcctgtcccaccggcttcaagaagatggaccaccacagctgt
gccaatggtcttgacaagttcctgctttttgcccgaaggacggacatccgacggatcagc
ttcgacaccgaggacatgtccgacgatgtcatcccgctggccgacgtgcgcaacgccgtg
gcgctcgactgggacgccaaagacggctacgtctactggacggacgtcaccacggactct
atcaacagagcgctgtggaacggcagcaagcaggaggtggtggtggacaccagtctggag
agccctgccggtttggcgattgactgggtgaccagcaagctctactggaccgatgctggt
acggatcgcatcgaagtgtcgaatgctgacggcagcatgcggactgtcctgatatgggag
aacctggaccggcccagggacattgtggtcgacccgatcggaggcttcatgtactggacc
gactggggcgccaacccaaagatcgagcgcgcaggaatggacgcctccagtcgcatcgtc
atcatctcgtccaatctgacgtggcccaacgggctcgccatcgactacgagacccagcgc
ctgtactgggccgacgctggcatgaagaccatcgaatttgggaactttgacggttctgac
cgacaggttttgattggcagccagctgccgcacccctttggcctgaccgtacacgatgac
aagctgtactggaccgactggcagtccaaaagcatccagagcgccgacaagctcaccggc
ttgggtcggcacacgctggccgaaaacctggagaacctcatggacattcacatgttccac
cggcaccgcgacacagtgcgtaacccctgcgcggtgaacaatggaggctgcagccacctc
tgcctcctggcccctgctcccaaggcctccagctgtgcctgtcccaccggcatcaacctg
caatctgatggaaagacctgcacgtcaggaatgagcagcttcctcatctttgcacggagg
accgacatcaggatggtttctctggacatcccatacttcgccgacgtggttctggccgtc
aacagctccatgaaaaacaccatcgccatcggcgtcgacccccaaggagcgaaagtttac
tggtctgacagcaccctgaagaaaatcagcagagctaacttcaacggaacagaatatgaa
gacatcatatctacggggttggtcacaactgatggtctggcggtggacgcccgcggcagg
aagatctactggacggacacgggaaccaaccgcatcgaggcagccaacctggacggctcc
atgaggaaagttctcgtgtggcagaacctggacagcccccgagccatcgctctctatcat
gagatggggtatatgtactggacggactggggagaacacgccaagctggagcgctcggcg
atggacggatccgaccgcgtggtcctcatcagcaacaacctcggctggcccaacggcctg
gccatcgacatggctggctcccagctactgtgggccgacgcccacactgagcgtatcgag
gctgccgacctgaacgggcagaatcgccacaccctggtgacgccggtccagcacccgtat
ggtttaaccctgctggggccgcacatctactggactgactggcagagccgcagcatccag
cgagctgacaagaacacaggggccaacaccatcactgtgcgagccaacctgccaggcctc
atggacatccaggccgtggacagggagaggccgatgggtttcaataagtgtggcaggagg
aacgggggctgcacccacctctgcctccctcgtcccaatggcacgtcctgcgcctgtccc
accggcatcttgctcaagggagacggcaggtcgtgcgacgactccccggagacatacctg
gttttctccaaccgcgtcagcgtgcgcagaatctccctggacaccaacgaccacaccgac
gtgcatgtgccggtgcccgagctgcacaacgtcatctcgctggactacgacagcgtggat
ggaaaactttactacaccgatgttaccctcgatgttataaggcgtgcaaacctagacggc
agtggcatggagacggtgatcagccagggcctgaagaccaccgacgggctggccgtagat
tgggtgtcccggaacatgtactggaccgacaccgggcgcaacaccatcgaggtggcccgg
ctggacggaacgtgccgcaaagtcctggtcaacaacagtctggatgaacccagagccatc
gccgtgttcccgagcaaagggttcctcttctggaccgactggggtcacattgcgaagatt
gagcgatctcacttggacggctcggaccggaaggtcctgatcaacaccgacctgggctgg
cccaacggcctcacgctcgactacgacacacggaggatcttctgggtggacgcccacctg
gaccggatcgagagctccgacctgaacgggaaactccgtcagatcctcgtcagccccgtg
tcccacccgttcgccctcacacagttgaagccggtgtcctcccctctaacccctttctcc
cgactctcgcagcaagaccgctggatctactggacggactggcagaccaagtccatccag
cgggtggacaaacacacgggccgcaacaaggaaaccgtgctgcccaacgtggagggcctc
atggacattatagtggtatcgcctcacagacagacgggtaccaacctctgtggagtgagt
aatggcggctgcactcacctctgctttgcgaagaccaacacttttgtgtgcgcctgcccc
gatgaaccagatgggagaccctgttccaccatttcaggttacatccccacgtctcctgcc
agaggaaccagcagcactcctgtccccaacaagatccccaacgctccgaccgacacgccg
cacagaggaccaacgctggtcaactgcacggacaagaacctaagtgttgaaggctgctcg
agcaacgtggtgacggctccccatggagagggtcttcatatcagctatgtgattggtgga
gttctgaccatcctggctattctgatcctcatcgctgctctgatcatttacagacacaaa
aagtcaaagttcgccgacccgggagtgagcaacctgacctacagtaacccctcgtaccgg
acgtccacgcaagaggtgaagatcgaggcctcgcagaagcctccgatatacaaccagctt
cgatataagaaagaggggggagtggacggaggctacaccaaggagaagatccgcatcgtg
gagggcgtgtgcctcctgtcccacgaggagctttactgggacgacctgaaacagatcaag
ccgtcccgcggcggcctgcacacctgcatgcgcacggacaccgtgtcgctgcaggccagc
agcgcgtcgctcgacgacggcgagacggagcagctgctgcaggaggaggcgtccgagtgt
tcctccatcgccaccctgaccccctcggccatcaccccgcagcgccacgcccagcacagc
ctgcccgacaccggctggacctccacgcgcaagccctccaccgagagcgaagtgtga
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integrated database retrieval system
