Scophthalmus maximus (turbot): 118302318
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Entry
118302318 CDS
T09850
Symbol
efl1
Name
(RefSeq) elongation factor-like GTPase 1 isoform X1
KO
K14536
ribosome assembly protein 1 [EC:3.6.5.-]
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
118302318 (efl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
smau03009
]
118302318 (efl1)
Ribosome biogenesis [BR:
smau03009
]
Eukaryotic type
Pre-60S particles
GTPases
118302318 (efl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFL1
EFG_C
EFG_III
GTP_EFTU_D2
EF-G_D2
EFG_IV
MMR_HSR1
RsgA_GTPase
Motif
Other DBs
NCBI-GeneID:
118302318
NCBI-ProteinID:
XP_035484251
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Position
4:27223338..27316091
Genome browser
AA seq
1117 aa
AA seq
DB search
MGPAGLDRIISLQRNPANIRNLCILAHVDHGKTTLADCLVASNGIISSRLAGKVRYLDSR
EDEQDRGITMKSSAISLHYSNGDQDYLLNLIDSPGHVDFSSEVSTAVRLCDGAVVIVDAV
EGVCPQTQVVLRQAWLENIRPVLVINKMDRLIMELKLTPQEAYTHLQKILEQVNAVTGSL
FMSKVLEERAEKEEKESETTSGDQVYDWSAGLEETDDSQLYFSPDQGNVVFASAIDGWGF
SVKQFAHIYSEKMGIKRELLLKTLWGDFYLNAKAKKIMKGAQAKGKKPLFVQLVLDNIWS
LYDAVVTRDQEKVVKVVTSLGVKVMARDSRHSDPKVLLSAICSQWLPVAQAVLSMVCEKL
PSPLDMAAERVEKLMSVGARRFDSLPEQTQELKRAFLQCSSAENAPVIVFVSKMFAVDTK
ALPQNRQRTLTPEEIGQRRELARQRHAARMAAGQTAAESNKDHIHSGSVPQEGQPSGICT
AKMENLTLKDSKPEESAEQRETFIAFARVYSGVVKKGQRVFVLGPKYDPTQGLSMLPESC
SASDFVPDVPHLSCCSMESIYLLMGRELEELEEVPAGNVLGIGGLEECVLKSATLSTSPA
CPPFIPLNFEARPIVRVAIEPKHPSEMPKLVRGMRLLNQADPCAEVLIQETGEHVLVTAG
EVHLQRCLDDLRERFAKIEFSASKPIIPFRETVVRPPKVDMVNEEMGKQHKVAIIHQMKE
EGSQGRSSDNLHVDPSGLVTLTTPNRLATVSVRAIPLPQEVTCLLESSSELIRTMEQVNM
SLREGKNLDINPATLEAMVGLKAQLENLLQGRKWRNAVEHIWAFGPRRCGPNILLNSVEG
YQRPSVWQCLGRVDDVDEAGAQAAVLRDFDNSIISGFQLATLSGPLCEEPLMGVCFSIER
WDVQSSAAPQSQDSRFCEDLAESKVERSSEATEAGPSQARRRPDAASADCYGPVSGQLIA
SMKEACRHAFHAQPQRLMAAMYTCEIMATAEVLGKVYGVLGKREGRVLHEEMKEGTDMFI
IKAVLPVAESFGFADEIRKRTSGLASPQLVFSHWEVLSSDPYWVPTTEEEYLHFGEKADS
ANQALKYMNAVRRRKGLYVEEKIVEHAEKQRTLGKNK
NT seq
3354 nt
NT seq
+upstream
nt +downstream
nt
atgggacccgcgggcctggacaggatcatttcgctgcagagaaaccccgcaaacatccgc
aacctgtgcatcctggcgcacgtggaccacggcaaaaccactctggctgactgcttggtg
gcaagtaatggcatcatatccagtcgactggcagggaaggtgaggtatctggacagcaga
gaggacgaacaggacagaggaatcaccatgaagtccagtgccatctctctgcactacagt
aatggagatcaggactacttactgaatctgatcgactctcccggtcacgtcgacttctcc
tccgaggtgtccactgctgtcaggttgtgcgacggtgccgttgtaatcgtcgacgctgtg
gagggagtgtgtccccagacccaggtggtgttgcgtcaggcgtggctggagaacatccgg
cctgttctagtcatcaacaagatggacagactcatcatggagctgaagctcactcctcag
gaagcctacacccacctgcagaagattctggaacaggtgaacgcagtgacaggatctttg
ttcatgtccaaagtgctggaggagcgagcggagaaggaggagaaagagagcgagacgaca
agtggtgaccaggtttacgactggagcgctgggctggaggagaccgacgactctcagctc
tacttttctcccgaccaagggaacgtggtctttgccagcgccatagatggatggggcttt
agcgtcaagcagtttgctcacatctacagcgagaagatgggtattaaaagggagttgctg
ctcaaaaccctgtggggagatttctacctcaatgcaaaagcaaaaaagatcatgaaagga
gctcaggccaaaggaaagaagccactgtttgtgcagcttgtgctggataacatttggagt
ttgtatgatgcagttgtcacaagagaccaggagaaggtggtgaaggtggtgacgtcactt
ggagtaaaggtgatggccagggactctcgtcactctgacccgaaagtcctcttatctgca
atctgcagccagtggttacctgtagcccaagctgtcctctcgatggtgtgtgagaagcta
cccagtcctttagacatggcagcagagcgtgtggagaaactgatgagtgttggagcgcga
cgatttgactcactccccgaacagactcaggaactgaaaagagcgttcctccagtgttcc
agcgcggaaaatgctccagtaatcgtctttgtgtccaagatgtttgccgtggacaccaag
gccttacctcagaacagacagaggacattaactccggaggagattggccagcgcagagag
ttggcccgacagagacatgctgccaggatggcagctggtcagacagcagcagagagcaac
aaagaccacatccactcagggagtgtgccacaggaaggccaaccttcaggcatctgcaca
gctaaaatggagaatctgacattgaaagactccaagccagaggagtcagcagagcagagg
gagaccttcatcgcgtttgcccgggtctacagcggggtggtcaagaaaggacaaagagta
tttgtgctaggaccaaagtatgaccccacccagggactgagcatgctgcctgagagttgc
agtgcttcagactttgtgcccgacgtgcctcatctgtcctgttgttccatggaaagcatc
tatctgctcatgggccgagagctagaagagctagaggaggtgcctgcaggaaatgtcctg
ggaattggaggtctggaggagtgtgtcttgaagtcagccaccctgtcaacctcccccgcc
tgcccgcccttcatccctctcaactttgaggccagacccattgtgagggttgcaatagaa
cctaaacacccaagtgagatgccaaagctggtgcgtgggatgcgcttattgaaccaggca
gatccctgtgctgaggtactgattcaggaaacgggagaacatgttctggtcactgctgga
gaggttcatctccaacgctgcctagatgacctccgagaacggtttgctaaaattgaattc
agcgcatccaagcccatcattccattcagagagaccgtggtacgtcctcctaaagtggat
atggtgaatgaagagatgggcaagcagcataaagtagccatcattcaccagatgaaagag
gagggctcacagggccgttcatcagacaacctccacgtggaccccagtggtctggtgacc
ctcaccactccaaacagactggccactgtcagcgtccgggcaatccccctgccgcaggag
gtgacgtgtctgttggagagtagctcagagctgatccggactatggagcaggttaacatg
tccctgagggaggggaagaatctggacatcaaccccgccaccctggaggccatggttgga
ctcaaagcccagctggaaaaccttctgcaggggaggaagtggcggaacgctgtggagcat
atctgggcttttggtcctcgcaggtgcggtcccaacattctgctgaacagcgtggagggc
taccagcggccctcggtgtggcagtgtctgggcagggttgacgacgttgacgaggctgga
gctcaggccgcagttctgcgagacttcgataacagcatcatcagtggcttccagcttgca
actctgtcagggcctttgtgtgaggagcccctaatgggagtttgcttctccatcgagagg
tgggacgtccagtcttcagccgcacctcagagtcaggactccagattctgtgaggattta
gcagagagcaaagtggagaggagcagcgaggccacagaagcagggccgagccaggccaga
cgcaggccagacgctgcctctgcagactgctacgggccagtatctggccagcttatcgcc
tccatgaaggaagcctgccgccatgccttccatgctcagccccagaggcttatggccgcc
atgtatacctgtgagatcatggccaccgctgaggtgctgggcaaagtgtacggtgtgctg
gggaagcgagagggtcgtgtcctccatgaagaaatgaaggaggggacggacatgtttatc
atcaaggctgttctgcctgtggcggagagctttggattcgcggacgagatccgcaagaga
accagcggattggccagtccacagttggtcttcagccactgggaggttctcagcagcgat
ccatactgggttcccaccaccgaggaagaatacctgcactttggtgagaaggccgactct
gctaaccaggcactcaaatacatgaacgctgtccgccgccgcaaaggcctctacgtggaa
gagaagatagtggagcatgcagagaagcagagaacactcggcaagaacaagtag
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