Scophthalmus maximus (turbot): 118302323
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Entry
118302323 CDS
T09850
Symbol
runx1
Name
(RefSeq) runt-related transcription factor 1 isoform X1
KO
K08367
runt-related transcription factor 1
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
118302323 (runx1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smau03000
]
118302323 (runx1)
Transcription factors [BR:
smau03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Runt
118302323 (runx1)
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GFIT
Motif
Pfam:
Runt
RunxI
Motif
Other DBs
NCBI-GeneID:
118302323
NCBI-ProteinID:
XP_035484263
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Position
1:24091645..24150882
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AA seq
636 aa
AA seq
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MIIKVIQCWIYQHGHVVQSLRKDTEVPGRTTNLPKRPQSHGSPAWNGASVSSPSRQTTSC
SRNQEEDTQRMQKSNKERRAQSGQQRLMEKSIPFFHHHWQHSCTARRDRQRRLRAKCHAQ
GRFSSLTGGEVGIKLPTFWLVDNRLYLPKPHSPRHCQTKAKNPAPGRRYTPPSTTLASGG
KMAEALPLGAQEAGGGAALVGKLRMADRGMVEVISDHPGELVKTDSPNFLCSVLPTHWRC
NKTLPISFKVVALGDIPDGTLVTVMAGNDENYSAELRNATAALKNQVARFNDLRFVGRSG
RGKSFTLTITVFTNPPQVATYQRAIKITVDGPREPRRHRQKMDEVKAGSLAFSERLTELE
HLRRSSMRVTPPHHHHHQPSATSRQSAALNSAAFSSPTHTQITADSRQMQSSPSWSYDQS
YPYLGQITTPSVHTANPLSPGRSSLSDLSSRLTGPDLTAFGDPRMTLERSFSSLPSLQDS
RFSDPRVHYPTTAAAFTYTPSHNPVSNSALGITMATAMATTPAGRYHTYLPPPYPANTPH
QAQNGPFQSTSSPYHLYYSTAAGSYQFSMMAGGGGCGGDSRSPPRILPPCTNASTGSSLM
HPSLPNQNEGVGVEVESSHSSSPTNMAAAEAVWRPY
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atgatcataaaagtcattcaatgttggatttatcaacatggacatgttgtgcaaagtctc
cgaaaagacactgaagttccaggccgcactacaaatcttccgaaaaggccacaatcgcac
ggaagccctgcctggaacggcgcaagtgttagctccccctcaagacaaaccacatcctgc
agcagaaatcaggaggaggacacgcagaggatgcagaagagtaacaaggagcgacgagcg
cagtccggacaacagagactgatggagaagagcatacctttcttccatcatcattggcaa
cattcatgcactgccagaagagaccgtcagagacgacttagggctaagtgtcatgcccaa
ggacgcttcagctcactgaccgggggggaagtggggatcaagctgccgaccttctggtta
gtggacaaccgcctctacctccctaagccgcattcgccccgtcactgccaaactaaagca
aaaaacccagcccccggccggcgctacactcccccctccaccaccctcgcctccgggggg
aagatggccgaggccctgcccctgggggcccaggaggccggaggcggggctgcgctggtg
ggcaaactgcgcatggcagaccgcggcatggtggaggtgatctcggatcatccgggagag
ctggtgaagaccgacagtcccaacttcctctgctctgtgctgccgacccactggaggtgt
aacaagactctacccatctcttttaaggtggttgccttgggcgacatcccagacggcacc
ttggtgacggtgatggcgggaaacgacgaaaactactcggcggagctccgcaacgccacg
gccgccctcaagaaccaagtggcccgattcaacgacctgcgctttgtcggccgcagtgga
agagggaaaagtttcactctgaccatcacagtgttcaccaaccctcctcaagtggccaca
taccaaagagccattaaaattacagtggacggtccgagagagccacggcgtcatcgtcaa
aagatggacgaggtcaaagccggctcgctggcgttctccgagaggctcacggagctggag
cacctgaggcggagctcgatgagggtgacgcctcctcaccaccaccaccatcaaccgtca
gccaccagccgccaatctgcagcactcaactctgcagcattctccagtcccacgcacact
cagataactgccgattccagacaaatgcagtcgtctccatcttggtcctacgaccaatcg
tatccctaccttggccaaataaccacacctagtgtccacacagccaaccccctttcgcct
ggccgctcctcactcagtgacttgtcctcaaggctcacaggtcctgacctcacagccttt
ggtgaccccaggatgaccttagagcgatctttcagttcccttccctctttgcaggactcc
cgcttctccgacccccgcgtgcactaccccaccacagcggctgctttcacctacaccccc
tcccacaaccctgtctccaacagtgccctcggcatcaccatggcaactgccatggcgacc
accccagcagggaggtaccacacctacctgcctcccccctaccctgcaaacaccccccac
caggctcagaacgggcctttccagtccacctcctcgccgtatcacctgtactactccacc
gctgctggatcgtaccagttctccatgatggctggaggaggcggctgcggcggtgactcg
cgctcccctccgaggatcctgccaccgtgcaccaacgcctccacgggctcctccctcatg
cacccctccttgcccaatcagaatgaaggagtgggcgttgaggtggagtcaagccatagt
agctcgccgacaaacatggcagctgccgaagccgtctggagaccttactga
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