Scophthalmus maximus (turbot): 118302397
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Entry
118302397 CDS
T09850
Symbol
myo5aa
Name
(RefSeq) unconventional myosin-Va isoform X1
KO
K10357
myosin V
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
118302397 (myo5aa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smau03019
]
118302397 (myo5aa)
04131 Membrane trafficking [BR:
smau04131
]
118302397 (myo5aa)
03029 Mitochondrial biogenesis [BR:
smau03029
]
118302397 (myo5aa)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
smau04812
]
118302397 (myo5aa)
Messenger RNA biogenesis [BR:
smau03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
118302397 (myo5aa)
mRNA cycle factors
P-body specific factors
118302397 (myo5aa)
Membrane trafficking [BR:
smau04131
]
Others
Actin-binding proteins
Myosins
118302397 (myo5aa)
Mitochondrial biogenesis [BR:
smau03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
118302397 (myo5aa)
Cytoskeleton proteins [BR:
smau04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
118302397 (myo5aa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
AAA_22
nSTAND3
DUF5382
AAA_16
HTH_17
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
118302397
NCBI-ProteinID:
XP_035484371
LinkDB
All DBs
Position
4:complement(18295498..18344582)
Genome browser
AA seq
1895 aa
AA seq
DB search
MNRELEYMFVERARVWIPDAEEVWKSAELNKDYKNGDASLVLMLEDGTNIEHKLDPKTKN
LPYLRNPDILVGENDLTALSYLHEPAVLHNLKVRFVDSKLIYTYCGIVLVAINPYETLPI
YGTDIINAYSGQNMGDMDPHIFAVAEEAYKQMARDERNQSIIVSGESGAGKTVSAKYAMR
YFATVSGSASEANVEQKVLASNPIMEAIGNAKTTRNDNSSRFGKYIEIGFDTRFRIIGAN
MRTYLLEKSRVVFQADEERNYHIFYQLCASSHLPEFKTLKLSSANDFLYTRQGRSPVIVG
VDDTKELNATRNAFMLLGINESYQMGLFRVLAAILHLGNVEIKDRDSDSSVIAPNNRHLT
AFCELVGVTYQDMTQWLCHRKLKTAAETYIKPLPRLQATNARDALSKHIYAKLFNWIVEH
VNKALITNVKQHSFIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNMHVFKLEQEEYM
KEQIPWTLIDFYDNQPCINLIEAKMGILDLLDEECKMPKGSDDSWAQKLYNTHLKTCSLF
EKPRMSNRAFIIQHFADKVEYQCDGFLEKNKDTVNEEQINVLKASKKFDLLVELFQDEHP
ATSPTGQVAGTGGRTRLSIKPDKSREKSSKEHKKTVGCQFRNSLQMLMETLNATTPHYVR
CIKPNDFKLAFTFDPKRAVQQLRACGVLETIRISAAGFPSRWTYQEFFSRYRVLMKQKDV
LPDKRLTCRNVLEKLVEDQDKYQFGKTKIFFRAGQVAYLEKLRADKLRAACIRIQKTIRC
WLARKKYLRKRCAAITIQRFTRGYQARCLAKFMRRSQAATVIQKYQRMCVEKKRYRQKQA
AALAMQTILRGYMARQKYQGLLRQHMAVIIQKRIRGWLARCWYKRCLESIVYLQCCIRRM
RARRELKKLKIEARSVEHFKKLNKGMENKIMQLQRKVDEQSKEMRLTNERLNGLETSYSA
ESERMRGELSRLRGVEEDAKNKTIQVTSLLEELERLRKELSVTQKEKKTIEDWAHTYRNE
MEKMVSELKEQNGSLKKDKDDLNRLIQEQSQQMTEKMARAIAEETQQLETDLNEERSRYQ
NLLTEHLRLEEKYDDLKEVALSSNVSKPGHRRTDSTHSSNESEYTYNSEYAELEEGSRAA
EDVTRGIDTSLTLKLQKRLTELEQEKQSLRNELENKEDQFQRARARDDAEFKKARGAELE
YESLKRQELESENKKLKHNLAEMRQSLLGNAATNSGAPGSPAYKVLLDQLNSSCEELDVR
KEEVLILRSQLVSQKEAMHHKDEKETMTEPSVYVEDVSKLKDADEIKQAYVGLKDTNRSP
RFMHKPLDVNDLLSRLRSAAPDFHKLNEDGELWLVNQGLKETIRLLEHQLQTQRRGHDNE
VEALRGELQNVKEENNRQQQLLAQNLQLPPEARIEASLQHEITRLTNENLEFMAEDPTAS
REARVIILRRMVDLMEQLEKQDRTIRKLKKQLKVYSKRIGEMGAGQTEGQTSPGQMVDEP
IHPVNIPRREKDFQGMLEYKKEDELKLVKNLILELKPRGVAVNLIPGLPAYILFMCLRHA
DYVNDDQKVRTLLTSTINSIKKILKKRGDDFETVSFWLSNTCRFLHCLKQYSGDEAFMKH
NTSRQNEHCLSNFDLAEYRQVISDLAIQIYQQLIKCMENILHPMIVSGMLEHETIQGVSG
VKPTGLRKRTSSIADEGTYTLDSILRQLSAFHSTMCQHGTDPELIKQVVKQQFYIIGAVT
LNNLLLRKDMCSWSKGMQIRYNVSQLEEWLRDKGLMTCGAKETLEPLIQAAQLLQVKKKT
DEDAEAICSMCQALTTAQIVKVLNLYTPVNEFEERVSVAFIRTIQTRLRDRCESPQLLMD
TKMIYPVTFPFNPSCLALETIQIPSSLQLGFLTRV
NT seq
5688 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgggagttggagtatatgtttgtcgaacgcgctcgggtgtggatccccgatgca
gaggaggtgtggaagtctgctgagctcaacaaggactacaaaaatggcgacgcctccctg
gtgctcatgctggaggatggaacgaacattgagcacaagctggaccccaagacgaagaac
ctgccttacctgcgaaaccccgacatcctggtgggcgaaaatgacctcacggcgctcagc
tacctccacgagccggccgtgctccacaacctcaaagtccgcttcgtcgactcgaagctc
atctacacttactgcggaatcgttctggtggccatcaacccgtatgagacgctgccaatc
tacggaacagacatcatcaacgcctacagcggccagaacatgggagacatggacccgcac
atcttcgccgtggcagaggaggcttacaaacagatggccagggatgagaggaaccagtca
atcatcgtgagcggggagtctggagcaggaaagacggtatcggccaaatacgccatgaga
tactttgctacggtcagcggctccgccagcgaggccaacgtggagcagaaggtcttggct
tccaaccccatcatggaggccatcggaaatgcaaagaccaccaggaatgacaacagcagt
cgtttcggcaaatacatcgagatcggcttcgacacccgcttccgcatcatcggtgccaac
atgaggacatatctgctggagaaatcacgagtggtctttcaggcggatgaggagagaaat
tatcatatcttctatcagctctgtgcatcatcgcatctgcccgagttcaagactctgaag
ctgagcagtgcaaacgacttcctgtacacacggcagggccgcagccccgtcattgtcggt
gtggacgacaccaaggagcttaatgccactcgcaatgccttcatgttgctcggtattaat
gagtcctatcagatgggcttgttccgggttttggcagctattcttcatctcggaaacgtg
gaaataaaggacagagattcggacagtagcgtcattgctcccaacaatcgccacctgacg
gcgttctgcgagctggtgggcgtgacctaccaggacatgactcagtggctgtgccacagg
aagctgaagacggccgcggagacgtacatcaagcccctccctcgtctgcaggccaccaac
gcacgtgatgcgctctccaaacacatctacgccaaactcttcaactggatcgttgagcat
gtcaacaaggctctgatcactaacgtcaaacagcactccttcatcggcgtcctcgacatc
tacgggtttgagacatttgagatcaacagctttgagcagttctgtatcaactacgctaat
gagaaactccagcaacaattcaacatgcatgtgttcaagctggagcaggaggagtacatg
aaggagcagatcccctggacgttgatcgacttctacgacaatcagccctgcatcaacctc
atagaagccaagatggggatcctggacctgttggacgaggagtgcaaaatgcccaaaggc
tccgacgattcttgggcccagaaactgtacaacacccatctgaaaacctgctccctgttc
gagaagccacgcatgtccaaccgcgccttcatcatccaacactttgctgacaaggtggag
taccagtgcgacggtttcctggagaagaacaaggacaccgtgaatgaagagcagatcaat
gtgctgaaggccagcaagaagtttgacctgctggtggagctatttcaggatgagcatcca
gccaccagtcccactggtcaggtcgccgggactggaggccggacccgcctcagcatcaaa
ccggacaagagtcgggagaaaagcagcaaggagcacaagaagactgtcggctgccagttt
cgaaactctctgcaaatgctgatggagactctgaatgcgaccactccacactacgtccgc
tgcatcaaaccaaatgacttcaaactggccttcacgtttgatcccaaacgtgcagtgcag
cagctcagagcctgtggtgtcctagaaaccatccgcatctctgctgcaggtttcccgtcc
agatggacgtaccaggagttcttcagccgttacagagtgctgatgaagcagaaggacgtg
ctccctgacaaaaggttgacctgcagaaatgttctggagaaactagtggaggaccaggat
aaataccagtttggtaagaccaagatcttcttcagggccggccaggtcgcttatcttgag
aagttgagggcagacaagttgcgtgctgcctgcatccgcatccagaagaccatccgctgc
tggctggcgcgcaagaagtacctgcgcaagcgctgcgctgcgatcaccatccagaggttc
actagaggataccaggcgcgctgcttggccaagttcatgcgtcgttctcaggcggccacc
gtcatccagaagtaccagaggatgtgcgtggagaagaaacgctacaggcagaagcaggct
gccgccctggccatgcagacgatcctcagaggttatatggcccgacagaagtaccagggg
ctactgcggcagcacatggcagtcatcattcagaaacgcattcgtggctggttggcccgg
tgctggtacaagcgctgcctcgagtccatcgtctacctgcagtgctgcatccgcaggatg
agggcgaggcgcgagttgaagaagctgaagatcgaggctcgctcagtggagcacttcaag
aagctcaacaaaggcatggagaacaagatcatgcagctgcagaggaaggtcgacgagcag
agcaaggaaatgcggttgaccaacgagaggctcaatggtctggagacctcctactccgcc
gagagcgagcggatgcgtggcgagctcagccggctgcgaggggtggaggaggatgccaag
aacaaaaccatacaggtgacatcgctgctggaggagctggagaggctgaggaaggagctg
agtgtcacgcagaaggagaagaagaccatcgaggactgggctcatacatacaggaacgaa
atggagaaaatggtctcggagctgaaggagcagaatggctcgctgaagaaggacaaggac
gacttgaacaggttgattcaggaacagagtcagcagatgacagagaaaatggcccgtgcg
atagcagaggagacgcagcagttggagacggacctgaacgaggagcgatctcgctaccag
aacctcctgacagaacacctgcgcctcgaggagaaatacgacgacctgaaggaggtggct
ctgtcctcgaacgtttccaagcccggccacaggaggacagactccacgcacagcagcaac
gaatcagagtacacctacaactcagagtacgccgaattggaggaaggttcccgtgccgcc
gaagatgttacacgaggaatagacacctcactgaccctcaagctgcagaaacgtctcaca
gaactggagcaagaaaagcagtcgctgcgcaacgagctggaaaacaaagaggatcagttc
cagcgggctagagcgagggatgatgcagagttcaaaaaggctcgtggggcagagctggag
tacgagtccctcaagcgtcaggagctggagtcggagaacaagaagctgaaacacaatctg
gcagagatgaggcaaagcctgctgggtaatgcagctacaaactctggggccccgggctcc
ccggcttacaaggtgctcctggaccagctcaactcctcctgtgaggagctggacgtccgc
aaggaggaggttctgatcctgcgctcccagctggtcagccagaaggaagccatgcaccac
aaggatgagaaggagaccatgacagagccgtctgtctacgtggaggacgtgtctaaactg
aaggacgctgatgaaatcaaacaagcctacgtaggcctcaaagacaccaacagatctccc
aggttcatgcataagccgctggatgtcaatgatctcctgagtaggctgagatccgctgct
ccagacttccataagctgaatgaggacggggagctgtggctggttaatcagggcttaaag
gagaccatcaggttactggagcaccagctgcagactcagcggagagggcacgataatgag
gtggaggcgttgcgcggcgagctgcagaatgtcaaggaggagaacaaccgtcagcagcag
ctcctggcccaaaacctccagctgcctccggaggctcgaatcgaagccagtctgcaacac
gaaatcacgcggctcacgaacgagaacctggaattcatggccgaggaccccacggcatcc
agagaggctcgagtcatcattttacgacggatggttgatctcatggagcagctggagaag
caggaccgcaccatccgcaagctgaagaagcagctgaaggtgtactccaagaggattgga
gagatgggagcgggtcaaactgagggacagacgtctccaggacagatggtggacgagccg
atccaccccgtcaacattcctcgcagggagaaagacttccagggcatgctggagtacaag
aaggaggatgagctcaaactggtcaagaacctcatcctggagctgaagcctcgcggcgtg
gccgtgaatctgatcccaggtctgcccgcctacatcctgttcatgtgtctgagacatgcc
gactatgtcaatgacgaccagaaggtccgcactctgctcacgtcgaccatcaacagtatt
aagaagatactaaagaaacgaggagatgactttgagaccgtctctttctggttgtccaac
acctgtcgcttcctgcactgtctgaaacaatacagcggagacgaggccttcatgaagcac
aacacatcgaggcagaatgaacattgtctttccaacttcgacctggcagagtacagacag
gtgatcagtgacctggccatccagatctatcagcagctgatcaaatgcatggagaacatc
ctccatcccatgatagtctctggcatgctggagcacgagaccatccagggcgtttcgggg
gtgaagcccacaggtctccgtaagcggacgtccagcatcgccgacgagggcacctacacg
ctggactccatcctgcggcagctcagcgccttccactccaccatgtgtcagcacggcacc
gaccccgagctcatcaagcaagtggtgaagcagcagttctacatcatcggcgccgtcacc
ctcaacaacctgctgctacgcaaggacatgtgctcctggagcaaaggcatgcagatcagg
tacaatgtgagccagctggaggagtggctcagagacaaaggtctgatgacatgcggtgcc
aaggagacactggagcctctgatccaggccgctcagctgctgcaggtgaagaagaagacg
gacgaggatgccgaggccatctgctccatgtgccaggccctcaccactgctcagattgtg
aaggtcctgaacctctacactccagttaatgagtttgaggagagagtgtcggttgcattc
atacgaaccatacagactcgcttgcgagaccgttgtgagagtccccagttgctgatggac
acgaagatgatatatccggtcaccttcccgttcaacccttcctgcctcgccttggagacc
atccagatcccctcctcgctccagctgggcttcctcacccgagtctaa
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integrated database retrieval system
