Scophthalmus maximus (turbot): 118302477
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Entry
118302477 CDS
T09850
Name
(RefSeq) E3 SUMO-protein ligase ZBED1-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
smau
Scophthalmus maximus (turbot)
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smau03000
]
118302477
04121 Ubiquitin system [BR:
smau04121
]
118302477
Transcription factors [BR:
smau03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
118302477
Ubiquitin system [BR:
smau04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
118302477
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Gene cluster
GFIT
Motif
Pfam:
Dimer_Tnp_hAT
DUF659
hAT-like_RNase-H
DBD_Tnp_Hermes
Motif
Other DBs
NCBI-GeneID:
118302477
NCBI-ProteinID:
XP_035484534
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Position
4:27013627..27019067
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AA seq
536 aa
AA seq
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MLRHFRAKHEKPAPSVQAAVESQGEGNRKERIDEVLVSMIVKDSQPFSIVDDDGFKYLVS
ILDPTYILPSRQTLKKMVDTKFTEEKEKAKEEVLRATGISLTSDMWTTVHMDSYLAVTCH
FVDSQDKLSTVLLGVGQFSGSSTAANIAAVKTALMEEWGIRSKIRCLVTDAAANMIACAN
ILQVRHTICIAHALNLVVIKAIDFPGFDEIRGRARKIVAYFRSSTVAKERLGTFQQQMGK
PAHKLLQEVDTRWNSTYDMLARLYEQREPVGAALVSLMTDLPPLSSTEYQSMSECLCVLS
PLKEATVELSAEKTVSGSKVIPLIRMLRHVITTNQQEVTDDKAAQLCTNLLGLMSERLCH
YETASQMTLATLLDPRFKTMGFCNPSYAQNAVKRLTAECAAKVRDTAAPNTTPEPAESSS
AAADNPGTGLWDLLDQRVMETRKVKSATANATVEVQRYLSEPNITRSEDPLQFWAQHKHI
YPHLYMLSLCYLCTPASSVPCEQVFSKAGEVVSKKRNRLSPSTVEKILFLNKNQTT
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgttgaggcactttcgtgcaaagcatgagaaacccgctccctctgtccaagctgcagtc
gagagccagggtgaaggaaaccgaaaggagaggattgatgaggtcttggttagcatgatt
gtgaaagactcacagcctttctccattgtggatgacgatggcttcaaatatttggtgagc
attttggatccaacttacattctaccgtcaaggcaaactttgaagaaaatggtggataca
aagttcactgaggagaaagaaaaggccaaagaagaagtgctgagggctacgggcatcagt
ttaacctctgatatgtggacgacggtccatatggattcatacttagctgtcacctgccat
tttgttgacagccaagataaactgtccactgtattactgggagtagggcaattttcgggg
tcaagtacagctgcaaacattgctgctgtcaaaacagccctcatggaggaatgggggatt
agatccaagatcagatgtcttgtcacagatgcagctgcaaatatgattgcatgtgcaaac
attttacaagtgagacatactatttgcattgcccatgctctcaatctggtggttataaaa
gctattgatttcccagggtttgatgaaatcagggggagggcaaggaagatcgttgcctat
tttagatcaagcactgtggcaaaagagaggcttgggacattccaacagcagatgggaaaa
cctgctcataagttgctgcaggaggtggacacgcgctggaacagcacctatgacatgctg
gccagactttatgaacagcgtgaaccagttggggctgcactggtctcactgatgactgat
ttgcccccgctgtcctcaactgagtaccagagcatgtcagagtgcctttgtgtactgtct
ccgctgaaagaggcaactgtggaactttcagcagagaaaactgtctcgggctcaaaggtc
attcctctcattcgcatgttgaggcatgtcattacaacaaatcagcaagaagtgaccgat
gacaaggcagcgcagctctgcacaaatcttttggggctcatgtctgagaggttgtgtcat
tatgagactgctagccagatgaccctcgccacactgctagacccacgcttcaagacaatg
ggattttgtaatccctcttatgcccagaatgcagtcaaaaggctcactgctgaatgtgca
gctaaggtcagagacactgcagcacctaacacaacaccagagcctgcagaatcctcttca
gcagctgcagataacccagggacaggcctgtgggatctattagaccaacgagttatggag
accaggaaggtgaagagtgcaactgcaaatgccaccgttgaagttcagcgctacctgagt
gaaccaaatatcactcgttcagaagatcctcttcaattttgggcccagcacaagcacatt
tacccccatttgtacatgctgtccctgtgctatctatgtacccctgcctcttctgtgccg
tgtgaacaggtgttctccaaggctggggaagtggtcagtaagaagaggaatagactcagc
cccagcacagtggagaaaatcctcttcttgaataaaaaccaaaccacttaa
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