Scophthalmus maximus (turbot): 118302562
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Entry
118302562 CDS
T09850
Symbol
copb1
Name
(RefSeq) coatomer subunit beta
KO
K17301
coatomer subunit beta
Organism
smau
Scophthalmus maximus (turbot)
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smau04131
]
118302562 (copb1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
smau04147
]
118302562 (copb1)
Membrane trafficking [BR:
smau04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
118302562 (copb1)
Exosome [BR:
smau04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
118302562 (copb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Coatamer_beta_C
Coatomer_b_Cpla
HEAT_2
Cnd1
HEAT
HEAT_EZ
Arm
MMS19_N
Motif
Other DBs
NCBI-GeneID:
118302562
NCBI-ProteinID:
XP_035484697
UniProt:
A0A2U9BD00
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Position
4:11495162..11504719
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AA seq
953 aa
AA seq
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MTAAENVCYTLINVPSDSEPPSEISLKADLEKGEIKAKTEALKKVIIMILNGEKLPGLLM
TIIRFVLPLQDHTIKKLLLVFWEIVPKTTPDGKLLQEMILVCDAYRKDLQHPNEFIRGST
LRFLCKLKESELLEPLMPAIRACLEHRHSYVRRNAVLAIYTIYRNFEHLIPDAPELIHDF
LVNEKDASCKRNAFMMLIHADQERALDYLSTCIDQVHTFGDILQLVIVELIYKVCHANPS
ERARFIRCIYNLLQSSSPAVKYEAAGTLVTLSSAPTAIKAAAQCYIDLIIKESDNNVKLI
VLDRLIELKEHPTHERVLQDLVMDILRVLSTPDLEVRKKTLQLALDLVSSRNVEELVIVL
KKEVIKTNNVTEHEDTDKYRQLLVRTLHSCSVRFPDMAANVIPVLMEFLSDTNEAAAADV
LEFVREAIQRFDTLRPLIIEKMLEVFHAIKTVKIYRGALWILGEYCSTKDDIQSVMTEVR
RSLGEIPIVENEIKKETGEVKPEDEVSAAPAQKLVTEMGTYVTQSALSSSRPSKKEEDRP
PLRGFLMDGDFYVAASLATTLTKVALRYVAIVQDKKKQNSFVAESMLIMVTVLHLGKSSL
PKKPITDDDVDRISLCLKVLSECSPLMNDIFNKECRKSLSHMLTVRLEEEKLSQKKESEK
RNVTVQADDPISFMQLTAKNETSSKEDQFQLSLLAAMGNTQRKEAADPLASKLNKVTQLT
GFSDPVYAEAYVHVNQYDIVLDVLVVNQTSDTLQNCTLELATLGDLKLVEKPSPLTLAPH
DFANIKANVKVASTENGIIFGNIVYDVSGAASDRNCVVLSDIHIDIMDYIQPASCTDAEF
RQMWAEFEWENKVTVNTNITDLNEYLQHILRSTNMKCLTPEKALSGFCGFMAANLYARSI
FGEDALANVSIEKPIHLGPDAPVNGHIRIRAKSQGMALSLGDKINLSQKKSNI
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atgacggctgcagagaacgtttgttacactctgatcaatgtcccatctgactcagagccc
ccttcagaaatcagcctcaaagcggatctagaaaagggggagatcaaggcaaagactgaa
gccctgaagaaggttatcatcatgatcttgaatggtgagaagttgccaggactactaatg
accatcatccgcttcgtgctgccacttcaagaccacaccataaagaagctgctgctggtt
ttctgggagattgtccccaaaacaactccagatggcaagctgcttcaggagatgatcctt
gtctgtgatgcctacagaaaggacctgcagcatcccaatgagttcattcgtggctccact
ctgcgtttcctgtgcaagttgaaggagtctgaactgcttgagcctctcatgccagcgatc
cgggcctgcctcgagcaccgtcacagctatgtgcgccgcaacgctgtcctggccatttac
accatctataggaattttgaacatctcatcccagatgcacctgagctgatccatgatttt
cttgtgaatgagaaagacgccagctgtaagagaaatgctttcatgatgctgattcatgca
gatcaggaaagagctctggattacctgagcacatgtattgaccaagtgcacacttttggt
gacattctccagctggtcattgtggagctgatttacaaagtttgccatgctaacccctct
gagcgcgcccggtttattcgttgcatctacaacctgttacagtcctccagtccggctgtg
aagtatgaggctgctggtactcttgtaacactctccagtgctcccacagccattaaggct
gctgcccagtgctacattgatttgattatcaaggagagcgacaacaatgtgaagctgatt
gttcttgatcgcctgattgaactgaaggagcatcccactcacgagcgtgtactccaggac
cttgtgatggacatcctgcgtgttctcagcactcctgacctggaagtcagaaagaagacc
ttgcagctggcactggaccttgtttcatctcgcaatgtggaagagttggtgattgttttg
aagaaagaagtgatcaagacgaacaacgtgacagaacatgaagacactgataaatacagg
cagctgttggttcgcactcttcactcttgcagtgtgcgcttccctgacatggcagccaat
gtcatacctgtgctgatggaatttcttagtgacactaatgaggcagctgctgctgatgtg
ctggagtttgtacgagaggctattcagagatttgacaccttgaggcccctcatcattgag
aagatgctggaagtctttcacgccatcaaaactgtcaagatctacaggggagcgctatgg
atcttgggagaatactgcagcaccaaggacgacatccaaagtgtgatgacagaagtacgc
aggtccttgggagagatcccaattgtagaaaatgagattaaaaaggagaccggagaggtg
aagccagaggatgaagtgagtgcagctccagcccagaagctggtgacagagatgggcacc
tacgtgacacagagtgccctcagctcctccaggccttcaaagaaagaggaggacagaccc
ccactcagaggcttcctgatggatggagacttttatgtggcagcttccctggccactaca
ctaacaaaagtggccttgcgctatgttgctattgttcaagataaaaagaaacaaaattcg
tttgttgcagagtccatgctgatcatggttactgtgctgcacctgggcaagtcctctctg
cccaagaagccaattacggacgatgatgtggaccgcatctcgctgtgcctgaaggtcctc
tccgagtgctcaccacttatgaatgacattttcaacaaggagtgccgcaaatccctgtca
catatgctgactgtcagactggaggaagagaaactgtcacagaagaaagagtctgagaaa
cgtaatgtaacagtgcaggcagacgaccccatctccttcatgcagctgacagccaaaaat
gagacgtcttctaaggaggaccagttccagcttagtctcctggctgctatgggcaacacc
cagaggaaggaggctgctgatcccctcgcttcaaaactcaacaaggtgacacagctgacg
ggcttctcagacccagtgtacgctgaagcctatgttcacgtcaaccagtatgacattgtg
ttggacgtgctggtggtcaaccaaaccagtgatactctccagaattgcacccttgagctg
gccactttaggtgatcttaagttggttgagaaaccttcacctttaactctggctcctcat
gattttgccaacatcaaagcaaatgtcaaagtggcttctactgagaatggcattatattc
ggcaacattgtgtacgacgtgtcgggagctgctagtgacagaaactgcgtcgtcctcagt
gacatccacattgacatcatggactacatccagccggcctcctgcactgacgccgagttc
agacagatgtgggcagagtttgagtgggaaaacaaggtgacggtgaacaccaatatcact
gatctgaacgaatatctccagcacatactgaggtccaccaacatgaagtgtctgactcct
gagaaggccctgtctggcttctgtggcttcatggctgccaacctttatgctcgttctatc
tttggagaagatgctctggctaatgtcagcatcgagaagcccatccacctggggcccgat
gcgcctgtcaacggacacatacgcattagagccaaaagtcaggggatggccttgagcctc
ggtgacaagatcaacctctcccaaaaaaagtcaaacatctga
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