Scophthalmus maximus (turbot): 118302580
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Entry
118302580 CDS
T09850
Name
(RefSeq) homeobox-containing protein 1 isoform X1
KO
K24885
homeobox-containing protein 1
Organism
smau
Scophthalmus maximus (turbot)
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smau03000
]
118302580
Transcription factors [BR:
smau03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
118302580
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HNF-1_N
Homeodomain
Homeobox_KN
HTH_3
DUF494
HTH_31
HTH_26
HTH_37
Motif
Other DBs
NCBI-GeneID:
118302580
NCBI-ProteinID:
XP_035484743
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Position
4:complement(22655618..22671224)
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AA seq
503 aa
AA seq
DB search
MFQQCEEPRFTIEQIDLLQRLRRTGITQAEVLHALDTLEHLDRQHGHKLTHKPSYMPPSS
SLSSSSTAAATSSMTSAATQTSFPDNQLSMSPNNNFDAASLPLPVPVSSPSVVMTAVAQN
GLVAVSNGRLSPPRFPLGVVSGNVTAPGYGFEASEEDIDVDEKVEDLMRRDSALIKEEIK
SFLGNRRISQAVVAQVTGISQSRISHWLLQQGSDLSEQKKRAFFRWYQLEKTNPGATLAM
RAAPLALEDMMEWQQAPPPFGTAPGGFRLRRGSRFTWRKECLAVMESYFSDNQYPDEAKR
EEIATACNGVIHKPGKKLSDLERVTSLKVYNWFANRRKDIKRRANIEAAILESHGIEVQS
PGGQSNSDEVDGNDFPDQACEVSLFDKRASARQYGFSRADLSSPTQVPTLLPSWFSALGR
GQRGTSLIGRSLVTGAGPQAEGSRLTGVSWSPPSPSLQDEPTVHSVLSEAQDAIGLAKAA
ANQVDGAGCGIGNDIKTETLEED
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgttccagcagtgtgaggagcctcgtttcaccatcgagcagattgacctcctccagagg
ctaaggaggacggggatcacccaggcggaggtcctccacgccctggacaccctggaacac
ctggaccggcaacatggacacaagttgacccacaagccttcatacatgcctccctcatct
tccctgtcttcttccagcaccgccgccgccacctcctccatgacctccgctgccactcag
acaagtttcccggacaaccaactctcaatgtcacccaacaataactttgacgccgcctct
ctcccactaccggttccggtctcctcaccctccgtcgtcatgacggcggtggctcagaat
ggcctggttgctgtcagcaatggcaggctgtcaccaccgcggtttccccttggcgtggtc
agcggcaacgtgacggcaccgggctacgggttcgaggccagtgaggaggacatagatgtt
gatgaaaaggtggaggacttgatgagacgggacagcgctttgatcaaagaggagattaag
tccttcctggggaaccggcggatttcccaggctgtggtcgctcaggtaacggggatcagc
cagagtcggatctcccactggctcttgcagcaggggtcggacctcagcgagcagaagaaa
cgggccttcttccgctggtaccagctggagaagaccaacccaggcgccactctggccatg
cgggctgccccgctggctctggaggatatgatggagtggcaacaagctccgccccccttt
ggcactgccccagggggcttccgtctgcggcgagggagcagattcacctggaggaaggag
tgtctggctgttatggagagctacttcagtgataatcagtaccccgatgaggcgaagaga
gaggagattgccaccgcctgcaacggtgttatccataaaccaggaaagaagctgtctgat
ttggagagggtcacatctctgaaggtctacaactggtttgccaaccgacgcaaagacatc
aagaggcgcgctaacattgaagcagccatcttggagagtcacggcatcgaggtccagagt
ccggggggtcagtccaacagcgacgaggtggacggcaacgacttccccgaccaggcctgt
gaggtttccctatttgacaagagagcttcagccaggcagtacggattcagtcgagctgac
ctctcctctccaacccaggttcccacgctgctccccagctggttctccgctctgggtaga
ggacagaggggcacctctctgatcggccgctctttagtgaccggagcgggtcctcaggcg
gaaggttccagactgacaggcgtgtcctggtctccgccgtccccatccctccaggacgaa
cccacagttcacagcgtgctatccgaggcccaggacgccatcgggttggcgaaggcggct
gccaatcaggtggacggggccgggtgcggtattgggaatgacatcaagacggaaacgctg
gaggaggactga
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