Scophthalmus maximus (turbot): 118302610
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Entry
118302610 CDS
T09850
Name
(RefSeq) paired amphipathic helix protein Sin3a-like
KO
K11644
paired amphipathic helix protein Sin3a
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
118302610
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
smau03036
]
118302610
Chromosome and associated proteins [BR:
smau03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
118302610
REST complex
118302610
Heterochromatin formation proteins
Other heterochromatin formation proteins
118302610
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
PAH_ZNF598
SPCC191_01
Motif
Other DBs
NCBI-GeneID:
118302610
NCBI-ProteinID:
XP_035484793
LinkDB
All DBs
Position
4:4728430..4745866
Genome browser
AA seq
1296 aa
AA seq
DB search
MKRRVEDQEPIFAPQQQQSRRPPVQGIAESFQHRALAPAPTVIEAAADNMQPSTGIQYSL
PQGYQVPTMPQSTSGHGHNPVPHVGPHAHSLSVQSQGPAVVQGHVHPPAPITSTQGQQQF
QRLKVEDALSYLDQVKLQFGNQPQVYNDFLDIMKEFKSQSIDTPGVINRVSQLFKGHPDL
IMGFNTFLPPGYKIEVQTNDLVNVTTPGQIHYITPHGISVQNIPISGAPSQPASHHQQQS
LPQAGPQTNTTTTTTTTPPVPTQPAPNKTSKPIQSPAHTPTSQPNPSIPSYASPRSPSAQ
SHTPVSSTPSGGPPLQNNQPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRN
AKEAAGNYTPALTEQEVYTQVARLFKNQEDLLSEFGQFLPDANSSLLLCKTAPDRAESVR
NDHGGTVKRPLLNNKQRLSQNGLPIRRPPGVGATPPVKKKPKIMGKDHSMTEVSKHSTST
ETMFFEKVKKALQSSEAYDNFLRCLHIFNQEVISRAELVQLVIPFLGKFPELFTWFKNFL
GYRESSHGEPSHAESLPKERATEGIAMEIDYASCKRLGSSYRALPKSYQQPKCTGRTPLC
REVLNDTWVSFPSWSEDSTFVSSKKTQYEEHIYRCEDERFELDVVLESNLATIRALEAVQ
RKLSRMSAEEQLRFKLDNTMGGASEVIHRKAIQRIYGDKAHDIIDGLKRNPAVSVPIVLK
RLKMKDEEWREAQRGFNKIWREQNEKYYLKSLDHQGINFKQNDTKVLRSKTLLNEIELLY
DDRQERAAEENATLPPSGPHITLTYDDSQILEDAAALIIHHVKRQVGIQKEDKYKIKQII
HHFIPDLLFARRGELSDVEEEEDEEEEEDTEMDQDSPKKHNGLPGGSPSKSKLLFGSMTA
QKLRGSDDAYNLFFVNNYWYIFLRLHHILCSRMLRIYGQAEKQIEEDAREREWEREVLGL
KRDKNENPAIQLKMKEPMDVEVEDYYSVFLEMVRNLLDGNMEPAQYEDSLREMFTIHAYI
AFTMDKLIQSIVRQLQHLVTDDVCSRVTDVYLSECANKATGGTLSTQTSRATAEGVYQRK
AEQLMSDENCFKLVFGKSRGSVSLAMELLDTEEENSDEPADAERWSDYVSRYLNSDSASP
ELREHLAQKPVFLPRNLRRIRKCQRGWEQLQQERMTRAPSDTSQDGDGELKMECMFKLNS
YKMVYVCKSEDYMYRHTALTRAHQSHERVNNRLHRRFHRWLDTWAKEHVTGDMAADSRRW
LMGDRREDMLPCTTTCSPEVLNYLNVNKYRVKYRTL
NT seq
3891 nt
NT seq
+upstream
nt +downstream
nt
atgaagaggcgcgtggaggaccaggaaccaatatttgcaccccagcaacagcaatcacgc
cgtcccccagtccaaggtattgcagagagcttccagcaccgggccctcgccccggcccca
accgtgatagaggcagccgcagacaacatgcagccctccaccggcatccagtattccctc
ccccagggctaccaggtgcctacaatgccccagagcacaagtggacatgggcacaatcca
gtgccacatgttggtccccatgcgcacagtctgtcagtgcagtcgcagggtcccgctgtg
gtccaagggcacgttcatccacccgcacccataacgtccactcaaggacagcagcagttt
cagcgactgaaggttgaagatgccttgtcctacctggatcaagtgaagctgcagtttggg
aatcagccacaagtttataatgattttcttgatattatgaaagagttcaagtcacagagc
atagacacacctggagtcattaaccgcgtgtcccagctcttcaagggccacccagacctc
attatgggttttaacaccttcttgccccccggatataagattgaggtccaaaccaacgat
ctagtcaacgtgaccacgccaggtcagatccactatatcacccctcatggtatttctgtt
cagaacatccctataagtggagcacccagccaacctgcaagccatcaccagcaacagagt
ctgccacaggctggcccacagactaacaccaccaccaccaccaccaccaccccgcccgtc
cccacccaacctgctccaaacaaaaccagcaagccaattcagtctccagcccacacaccc
accagccagcccaatccatccatcccctcctacgcctcaccgcgctcaccgtcggcccag
tcccacactcccgtgagcagcacgccgtccggtgggccacctctccagaacaaccagcct
gttgagttcaaccatgctataaactatgtcaacaagatcaagaaccgcttccagggtcag
ccggacatctacaaagccttcttggaaatcctgcacacctaccagaaggaacaaagaaat
gctaaagaggcagcaggtaactacacaccagcactgaccgagcaggaggtctacacccag
gtggcaaggctcttcaagaaccaggaggacctgctctcagagtttggacagttcctgcct
gatgccaacagctcactgctgctgtgcaagaccgccccagacagggcagagtcggtgcgc
aatgatcatggcgggacagtgaagagacccttattaaacaacaagcaaaggctgagccag
aacggcctgcctatcagaagaccacccggcgtgggagccacaccgcctgtcaagaagaaa
cccaaaataatggggaaggaccacagcatgactgaagtcagcaaacacagcaccagcact
gaaactatgttctttgagaaggtgaagaaggctcttcagagctctgaggcgtatgacaac
ttcctgcggtgtctgcacatcttcaatcaggaagtcatttcacgcgctgagctggtccag
ttggtcatcccctttcttggaaaattcccagagcttttcacttggttcaaaaacttcctt
ggctaccgagagtctagccacggggagccaagccacgcggagagtttacccaaggagcgt
gcgacagagggcatcgccatggagattgactacgcttcttgcaagaggctggggtccagt
tatagagcactgccgaagagctaccagcaaccgaagtgcacaggaaggacacctctgtgc
cgagaggttctgaatgacacgtgggtgtcgtttccatcgtggtccgaggattctacattt
gtgagctccaagaagactcaatacgaggagcacatttacagatgtgaagatgagcgcttt
gagctggatgtggtgttggagtccaaccttgccacgatacgagccctggaggcagtgcag
cggaagctttcgcggatgtctgccgaggagcagctgcgcttcaagctggacaacacaatg
gggggcgcctcagaggtcatccaccgtaaagctatccagaggatatatggggacaaggcc
catgacatcatcgacggcctcaagaggaacccagctgtgtctgtccccattgtgctgaaa
aggttaaagatgaaggacgaggagtggagagaagcacagagaggcttcaacaaaatctgg
cgggagcagaatgaaaagtattacctgaagtcacttgaccatcaaggcatcaacttcaag
cagaatgacaccaaagtgctgcgctcaaagaccttgctcaatgaaattgagttgctgtat
gatgatcgccaggagcgagcggccgaggaaaacgccacgctgccgcccagtggcccgcac
attaccctgacctacgacgacagccagatcctggaagacgctgctgccctcatcatccac
cacgtcaaaagacaggtgggcatccagaaagaggacaagtacaagatcaaacagatcatc
caccacttcatccccgacctgctgtttgcgcggcgaggcgagctctctgacgtggaggag
gaggaggacgaggaggaggaggaagacacggagatggaccaggacagccccaagaagcac
aacggtttgcccggcggcagcccgtccaagtcgaagctcctcttcggcagcatgaccgct
cagaagctacggggctcagacgatgcctataacctgttcttcgtgaacaactactggtac
atcttccttcgtctccaccacatcctctgctcacgtatgctgaggatctacgggcaagcc
gagaagcagattgaggaggacgcccgtgagcgtgagtgggaaagggaggtgttggggctc
aagagagacaagaatgaaaatccagcgatacaactgaagatgaaggagccgatggatgtc
gaagtggaggactactactctgtgtttctggaaatggtgcgcaaccttttggacggaaac
atggagccagctcagtacgaggactccctgagggaaatgttcaccatccatgcctacatt
gccttcaccatggataaactcatccagagcatcgtccgtcagctccagcacctcgtcacc
gacgacgtgtgttcacgagtgacggacgtgtacctgagcgaatgtgccaacaaggcgacg
gggggcacactatccacgcagacgtccagggccacggcagagggcgtctaccagcgcaag
gcagagcagcttatgtcggatgagaactgcttcaagttggtgtttggaaagagccgagga
tctgtcagcctggccatggagctgctggacacggaggaggagaactccgatgagccagca
gatgccgagaggtggtccgactacgtgagcagatacctgaactcagattccgcgtcccca
gagctgcgtgaacatctggcccagaagccggtgttcctccccaggaatttgagacggata
aggaagtgccagagaggatgggagcaactgcagcaggagcggatgacccgggccccctcg
gacacgtcgcaggacggcgacggtgagctgaagatggagtgcatgttcaagctcaactcc
tacaagatggtgtacgtgtgcaagtccgaggactacatgtacaggcacacggcgctcaca
cgggcacatcagtcccacgagcgggtgaacaaccgcctgcaccgacgcttccaccgctgg
ctggacacctgggccaaagagcacgtgacgggcgacatggccgccgacagccgcaggtgg
ctgatgggagaccgacgagaggacatgttgccctgcaccaccacgtgcagcccggaggtc
ctcaattacctcaacgtgaacaagtaccgggtgaagtacagaactctgtag
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