Scophthalmus maximus (turbot): 118302619
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Entry
118302619 CDS
T09850
Symbol
cngb1a
Name
(RefSeq) cyclic nucleotide-gated cation channel beta-3 isoform X1
KO
K04952
cyclic nucleotide gated channel beta 1
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
118302619 (cngb1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
smau04040
]
118302619 (cngb1a)
Ion channels [BR:
smau04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
118302619 (cngb1a)
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Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
118302619
NCBI-ProteinID:
XP_047187413
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Position
4:754721..777842
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AA seq
1234 aa
AA seq
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MLSWVVKVVPQPPEPPSKKDEEQKEKPAVAPPPAPTTPPVAGPPTVQEKKVTFQDERKKE
APKDPKAPGADKQEAKTGEGNSAASVSQPGVLTWISGALPQPAVSLSRATSSCSTEENAT
GRKGMLAWIAQGLEKVVPQPDLKVKESAAAERPAEGIDKVVPQPEIQVRSKTDGNEKTEA
PASTKAEAPPPEAPPAPKPAADTEKSSGEAEQQQPNMMGWIFSGIGRMLPQPVQKQDSGS
GEVQSISITQQRTDLVLEDVGPDEDTEATREVNTANLQASRKENEDAETQMDWTPLRDSA
KKEAGEAVLAHMEERLQQERLEAARVAEEVARKAAEEAVRQLEVEHSAKIIIETLPESSE
QLPNILEEENEDDPECPVDVCPADDDTDAQVDRVGAAAGTVKLPTLPTESELPEEVTPSS
TDVEPGSERRDLESPVSQPITQQPQSQAPEARTTTTEQGNKAAEEVGCGAPALKVEDVDQ
GAGQGKGLNIPQIITTPEPHSTTVPDMPLSKLSFANEEDDELLGTDLRTWSGQGDLLTAD
DEMRPLSAASVGSVVVQDRLSELVRLFKGRTERQRDRLVDPDESEGESPTASPSKAPPPP
PPPPPPGEEKKDEAAAAAAEKEEKGEEEEAKFLFEFMGFPVKIPQLPKLPPMPDWLRAIV
EYRFPDSIDPFTDLIYVLWLFVVVAAWNWNVWLIPVRWAFPYQTADNIHLWLLVDYTCDF
IYIADILVFQPRLQFVRGGDIVCDKKDMRENYMTTERFKMDVISLFPMEIFYYFTGVNSL
LRFPRLLKYMAFFEFNDRMEAVMKKAYIYRVIRTSTYLLYSLHINACLFYWGSDYEGLGS
TKWVYNGKGNAYIRCYYFAVKTLITIGGLPDPTTVFEICFQLINYFVGVFAFSIMIGQMR
DVVGAATAGENYYRACMDSTVKYMNSYHIPREVQNRIKTWYDYTWKIQGMLDEQELLIQL
PTKMRMDIAVDVNYAIVSKVALFQGCDRQMVFDMLTRLKSVVYLPGDFVCKKGEIGREMY
IIKQGEVQVVGGPDLQTVFVTIRSGSVFGEISLLAGGGGNRRTANVKAHGFANLFILDKK
DLAEILVHYPESQKLLRKKAKKMLTKDKKPDEKDGGKEVVQVVPPRPDTPEMFKAALKVA
EQAGIEGTFVKLKKAYRQSEAAAEARSSISPLPPPSPMHRRSPVPVFPAQDDNDTVAETA
DSSVVIRMTPRQEGEEVLTVEVLPTEGGGGEEEE
NT seq
3705 nt
NT seq
+upstream
nt +downstream
nt
atgttgagctgggtggtcaaagtcgttccccagccgcctgagccgccgtccaaaaaagat
gaagagcagaaggagaaaccagccgtcgccccgcctcctgcgccaaccacgccccctgtg
gcgggccctcccactgttcaagagaagaaagtgacgtttcaggatgagcgtaagaaggaa
gctccaaaagatccgaaagctccaggtgccgacaaacaggaagcaaagaccggcgagggc
aacagcgcggcgtccgtctctcagcccggcgtgttgacgtggatcagcggagctctgcct
caacctgcggtctcactgagccgggccacctccagctgcagcacggaggaaaacgccacc
ggcaggaaggggatgttagcgtggatcgctcagggtttggagaaggtcgttcctcagcct
gatctgaaggtcaaagaatcggcagcagctgaacgtcccgctgagggaatcgacaaggtg
gttcctcagccggagatccaagtccgctcaaagacagacggcaacgagaagaccgaggcg
cctgcttccactaaagccgaagctcctcctccagaagccccgccggccccgaaaccagct
gccgacactgagaaatcctccggagaagccgagcagcagcagcccaacatgatgggctgg
atcttcagtggcatcgggcgcatgttgcctcagccggtgcagaagcaggactcgggcagt
ggtgaagtgcagagcatcagcatcacgcagcagaggacggacctggtgctggaggacgtg
ggaccggacgaggacacggaggcgacgcgggaagtgaacacagccaatctgcaggcgtcg
aggaaggagaacgaagatgcagaaacgcaaatggattggactccgctgagggacagcgcc
aagaaggaggcaggagaggcagttctagctcacatggaggaaagactgcagcaggagcgt
ctagaggcggcccgtgttgcagaggaagtagccaggaaggcagcggaggaggcagtccgc
cagctggaggtggagcattcggctaagatcatcatagaaacactgccagagtccagcgag
caactccccaacatcctggaagaggaaaacgaggacgacccagagtgcccggtagacgtc
tgtccagctgacgatgacactgacgctcaagtagacagagtgggggctgctgcaggaaca
gtcaaactgccaaccctgcccactgaatccgaactaccagaggaagtgactccttcatcc
acagatgtggagccaggatcagagaggcgagacctggagagtccggtctcacagccaatc
acccaacaaccacagtctcaggctccagaagctcggaccaccaccacagagcagggcaac
aaagcagcagaagaagttggatgtggagctccggctctgaaggtggaggatgtggatcag
ggggcggggcaggggaaaggcctcaacatcccccagattatcacaaccccagaaccacat
tccactactgtcccggacatgccgctgtcaaaactcagctttgctaatgaggaggatgat
gagctgttggggacggatctcaggacctggtccggtcagggagacctgctgactgcagat
gacgagatgcgtcctctgtcggccgccagtgtcggcagcgtcgtggtccaggaccgtctg
agcgagctggtcaggctgttcaaaggtcgaaccgagcgccagagagaccggctggtggac
ccggacgagtccgagggggaaagtcccacggcctccccgagcaaagctcctcctccccct
cctccgccgccgcccccgggggaggagaagaaggacgaagctgccgccgcagcagcagaa
aaagaagaaaaaggagaagaagaagaggcaaagttcctctttgaattcatgggattcccg
gtaaaaattccccaactgcccaaacttcccccgatgcccgactggctccgagccatcgtg
gaataccgcttccccgacagcatcgacccgttcaccgacctgatctacgtgctctggctg
ttcgtcgtggtggcggcgtggaactggaacgtgtggctgatcccggtccgctgggcgttc
ccctaccagaccgccgacaacatccacctgtggctgctggtcgactacacctgcgacttc
atctacatcgccgacatcctcgtcttccagcccaggctgcagttcgtccgcggaggagac
attgtgtgtgataaaaaggacatgagagaaaactacatgaccaccgagagatttaagatg
gacgtcatcagtctgtttcccatggagatattttactacttcaccggagtcaactctctg
ctgaggttccctcgtctgctgaagtacatggctttcttcgagttcaacgacagaatggaa
gccgtgatgaagaaggcctacatctacagggtgatccgaacctccacatacctgctctac
tctctgcacatcaacgcctgtctgttctactggggttcggactacgaaggactgggatcc
accaaatgggtctacaatgggaaaggcaacgcttacattcgttgttactactttgccgtg
aagacgctgatcaccatcggggggctgcccgaccccaccaccgtcttcgagatctgcttc
cagctcatcaactacttcgtcggcgtctttgcgttttctatcatgatcggtcagatgaga
gacgtggtcggcgcggcgacagccggtgagaactactaccgggcctgtatggacagcacc
gtcaagtacatgaactcctaccacatcccccgagaggtccagaaccgcatcaagacctgg
tacgactacacctggaagatccagggcatgctggacgaacaggagctgctgattcaactt
cccactaagatgagaatggacatcgctgtggacgtcaactacgccatcgtcagtaaagtc
gcactgtttcagggctgtgacagacagatggtgttcgacatgctgacgaggctgaagtct
gtcgtctacctgcctggagacttcgtctgtaaaaagggggagattggcagggagatgtac
atcatcaagcagggggaggtccaggtggtgggcggtcctgacctgcagacggtgtttgtg
accatcagatccggctcggtgttcggagagatcagtttgttggctggaggcggagggaac
cgacgaactgccaacgtgaaggcgcacggattcgccaacctcttcatcctggataagaaa
gacctggcagagatcctggtgcactaccccgagtcccagaagctgctccgcaagaaggcc
aagaagatgttgacgaaggacaagaagccggatgagaaggacggaggcaaagaggtggtg
caggtcgtcccgccgcgaccggacacgcccgagatgttcaaggcggcgctgaaggtggcg
gagcaggcgggaatagaaggaaccttcgtcaaactgaagaaggcctacaggcagtccgag
gccgcggcagaggctcggtcctccatctctccgctccctcctccctctccgatgcaccgc
cgctcgccggtccccgtcttcccggcgcaggacgacaacgacacggtggcggagacggcc
gacagctcggtcgtcatcaggatgacgccgcgacaggaaggagaggaggtgctcaccgtg
gaggtgctgcccacggagggaggggggggggaggaggaggagtga
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