Scophthalmus maximus (turbot): 118302654
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Entry
118302654 CDS
T09850
Name
(RefSeq) lymphocyte-specific protein 1-like isoform X1
KO
K12327
caldesmon
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
118302654
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
smau04812
]
118302654
Cytoskeleton proteins [BR:
smau04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
118302654
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caldesmon
Motif
Other DBs
NCBI-GeneID:
118302654
NCBI-ProteinID:
XP_035484864
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All DBs
Position
4:1778556..1809692
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AA seq
538 aa
AA seq
DB search
MSESIRRRSSSRQLLQNLIRVTAQRSQEDAEEVERERRRRSRETQRGEGSPPWPEPTHHR
ELPHSTESDEELKPRCRLVLEEDEGFSDWSHRLENRSEREQVRGDCRAGGRTPTAPRWKS
GPEEEKERGDEEEGRGPERSSRSHEASPLPAEKVSGGKKEFRASYSSSVFLPQDTRLAAA
HPADRTSYLAAGTMRPRGAACRVDGEPEQEEDEQPTPRRSAETRQSCGDEDDPEEDELSY
THEERDEERDGERDEERVDLHLRRNRHREEEEEEEEEEEELKMQDTPSEESGDASAVVAN
RRSAVSLCSEDDEPLNCYGPMSPTFKKLLIQFYPDEINSRVSTDGKCTITERTESLRRST
SDVKRTPPPVAVSKIDKKLEQYAHALELSSKDGRSGAQAPTDLTGPSEPVAAKKNLFEAG
EAWNQNAVSVAASKDADGLKVGVADLINQWVRGSEDGSRCSSPSKPTEIKSGGVLNKKNL
WESLGDTFSPGRDGKESPSGKKYKFVVAGHGKYQKVSDDNSCSEDGTCESAGEFYEDL
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atgtccgagtccatcagaagaaggagctccagcaggcagctcctgcagaacctcatcagg
gtgacggcccagcggagccaggaggatgctgaggaggtggagcgggagcgacggaggaga
tccagggagacgcagagaggagaggggagccccccctggccggagcccacccaccaccgc
gagctgccacacagcaccgagtcggacgaggagctgaagcccaggtgccgcttggttctg
gaggaggacgagggcttcagcgactggagccacaggctggagaaccgcagcgagcgggag
caggtgcggggcgactgccgggccggcgggcggacgcccacggccccgcgctggaaatca
gggcctgaagaggagaaggagaggggggatgaagaggagggccgggggccggagagaagc
agtcgctcccacgaagcttcgccattgcctgcagagaaggtgtcaggcggcaaaaaggaa
ttcagggcgtcctacagctcgtcagtgtttctgccacaggacacccggctcgccgcagct
catcccgccgacaggacgtcctacctggccgcagggacgatgaggccgcggggagcggcc
tgcagggtggacggggagccggagcaggaggaagacgagcagcccactccgaggaggtca
gcagagacccggcagagctgcggagacgaagacgacccggaggaagacgagctgagctac
actcatgaagagagggatgaagagagggatggagagagggatgaagagagggtagacctc
cacctcaggaggaacagacacagagaggaagaggaggaggaggaggaagaggaggaggag
ctcaagatgcaagacacgccttcggaggaaagcggcgacgcgagcgccgtggtggcgaac
aggagatctgcggtttctctctgcagcgaagacgacgagccgctaaactgctacggcccc
atgagcccgaccttcaagaaactcctcatccagttctacccagacgaaatcaacagcaga
gtctctacggacggcaaatgcacgatcactgagagaaccgagtctctgcgcaggagcacc
agcgacgtgaagaggacgccgccgcccgtggctgtttccaagatcgacaagaagctggag
cagtacgcgcatgctctcgagctctcctcgaaggacggcaggtcaggcgctcaggctccg
acggacctgacgggtccgagcgaacccgtcgccgccaagaagaacctgttcgaggccgga
gaggcctggaaccaaaacgccgtctcagtcgcagcgtccaaggacgcggatggtttaaaa
gtgggcgtggctgacctcatcaatcagtgggtgagaggaagtgaagacggcagcaggtgc
agctcgccctccaaaccgacagaaataaaatctggtggagttttgaacaagaaaaatcta
tgggagagtctcggtgacacattttctcctgggagagacggaaaggagagcccgtctggt
aaaaagtacaagtttgtggtggccggtcacggaaagtaccagaaggtttcagacgacaac
agctgcagtgaagacgggacctgtgagtcggctggagagttctatgaagatttgtga
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