Scophthalmus maximus (turbot): 118302837
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Entry
118302837 CDS
T09850
Name
(RefSeq) C-myc promoter-binding protein-like isoform X1
KO
K20163
DENN domain-containing protein 4
Organism
smau
Scophthalmus maximus (turbot)
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smau04131
]
118302837
Membrane trafficking [BR:
smau04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
118302837
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Gene cluster
GFIT
Motif
Pfam:
DENN
dDENN
uDENN
PPR_2
PPR_3
DUF2464
PPR_long
PPR
Motif
Other DBs
NCBI-GeneID:
118302837
NCBI-ProteinID:
XP_035485205
LinkDB
All DBs
Position
4:2104196..2166466
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AA seq
2016 aa
AA seq
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MMEDKGPRVADYFVVAGLTDSSKPLDQEIHFDDVCHKTAKPRAPVTDVALVIRSLGEEVP
PGFTCVETTPTGHSADLNNGGLMAPQIFLCYRRGRDKPPLTDLGVLFEWKERLKQGCHLI
QTTPTGRPANISSNSSQRIYVTYRRAPESQPHAALAVTDICIIVPSKGETPPHTFCKVEK
NLNSSMWGSSVFLCYKKSVAKTNTIAYKAGLFSRYPEEDYESFPLPESVPLFCLPMGATI
ECWPANTKYSLPVFSTFVLTGASGEKVYGAAIQFYEPYPQECLTDQQLSQLDLLSLDPHT
PSSTSSCSSSSSSNSSPAAAAGSIPTTSTNSTTTRLVYTNKCICLLSHWPFFDAFRKFLT
FLYRYSISGPHALPIEKHISHFMHKVPFPSSQRPRILVQLSPHDSLMLSQPVSSPLPLSG
GRFSTLLLNLGPENAVTLLVFAVTEHKILVHSLRPAVLTSVTEALVSMIFPFHWPCPYIP
LCPLALADVLSAPCPFIVGVDSRYFDLYDPPPDVSCVDLDTNTIFHNEDKRALTWKILPK
KACKNLMNVLSNLHQQLLDGQHRPDGLPELSMSDSSELSCGKSLHMLELEIQEAFLRFMA
AILKGYRSFLRPITQAPSEKATDASSLFDLQGFLKSRDRSHQKFYSLMTKTQMFIRFIEE
CSFVSDKDASLAFFDDCVDKLYSSERSADKGGKVDSEKPEESRLIEVDESQRSEHTVFIT
PPELPPLPGGEEYPLCYRYDGFPVLSLDLFDPVEGLRTPSSRLAARHSCPASPAPMFRRT
KQEIKLAQKVAKKYSSVPQLWSKCLLRHCYGLWFICLPAYVKVCHSKVRALRTAYDVLRK
MQAKKLQPPDEVCYRVLMQLCGQYGQPVLAVRVLFEMKKAGIHPNAITYGYYNKAVLEST
WPSSTRGGYFLWMKLRNVILGVAQFKRALRRHGPVTPSPLSDGSDLDAVSHGSLDSSVDT
NPADSVKVDPTDDRSSTVGRGGGGVGAGAPVAHSHWGGSELREATLHPGDQSDLGYNSLS
KEEVRRGDPGAPDAAPDKDDKKESDCSSLSETESAKGSKDCLPQLEVDVHSSFKPRGIVR
SSFPFDESSCKPKSSVSSGHVAGLLFTSSLDEIGEVRANSLLRRHKSALEEVVVGSAGSG
SDWQGARGRRLSGDTVGSSGSGTTVLGLGMSQGETDPDKIAGHLGADAKILSAANFSKSK
RPRSLALGGLEGAAARSLDHREEEEEEEEEGQDSSDEDRSNTDAIFDLEDLDLDKPGAGA
HRPHKTHKKLVERSASYGAMSTAASRGAVKRTGIETGDDPLSLLAAASRSEDLYPEGDEV
STPRARRHLAREIELYMNHMGSPVSSRTPSLDLQDPASPLLLHPSSLSAPRRASLPHGSP
LRAAGVPRSRTFHPPSPSQPIARQRLWSSPPCRSASTTPSPSPRPSPYRERADRMSLASP
SPSSSSFALDTLLTPKLDVFKTSVVSAGKGVAEKASRWYSRLATYTTPTKDGHSDRLSVA
SLGVGDPDGSSLLDEEDRGESESSVVSPLRNGPAGPRRSPRRSPLRSRLDSPTAGSGHTR
PTSLLPGCVLSPPGFPLPDKSDVGSSHYTSNTSIFNNYAMELLISSCSRCKTCDCLVYDE
EIMAGWTADDSNLNTTCPFCGNPFLPFLNVEIRDMRGPGRLFLKGSPSVDEAMTSSCSAS
TGLDTGTSTLSTPCPTTAVCPPSPVIAVQERSGGSRTQGINIPSDHRQGALSPGGHMARS
VSAFGPLDDASRTDRCVPTSGSLPSRLNETTDPLNMEWRLHNPEPVTVPYLSPLVLWKEL
ESLLENEGDPVITEADLVDHHPIIYWNLVWYFRRLDLPSNLPGLILTSEHCNRDSQVPRH
WMSEDSKHVLIQILWDNLKLHQEPLQPLYIVWNTYNVGYPLCRPVPEEERLFSEELLQSV
VKSIQRNDVGRPMAQLLQLLHQTLGTKRQRSLYRDILFLSQVALGKDNIDIDAFDREYKL
AYDRLTPGLVKLTHNCDRPPSTGVMECRRTFGEPYL
NT seq
6051 nt
NT seq
+upstream
nt +downstream
nt
atgatggaggacaaaggccctcgtgtagccgactacttcgtggtggccggcctgacggac
tcgtccaagccgctcgaccaggagatccactttgacgacgtctgccacaagacggccaag
ccgcgggcgcccgtcaccgacgtggcgctggtgatccgctcgctgggcgaggaggtgccg
ccgggcttcacctgcgtcgagacgacgccgacgggccactcggccgacctcaacaacggc
ggcctgatggcgccgcagatcttcctgtgctaccggcgaggccgcgacaagccgccgctc
actgacctgggcgtgttgtttgagtggaaggagcgactgaagcagggctgccacctcatc
cagaccacgcccaccggccgcccggccaacattagcagcaattcctcccagcgcatctac
gtcacctaccggcgggcgcccgagagccagccgcacgccgccctggccgtcaccgacatc
tgcatcatcgtgccgagcaagggggagacgccgcctcacaccttctgcaaggtggagaag
aacctcaacagcagcatgtggggctcctccgtcttcctgtgctacaagaagtctgtggcc
aaaaccaacacaatagcctacaaagcgggtttattcagcagatatccagaggaggactac
gagtcgttcccgctgccggagtccgtccccctcttctgccttcccatgggggcgaccatc
gagtgttggcccgccaacaccaaatactcgctccccgtcttctccaccttcgtcctcacc
ggagcatccggagagaaggtgtacggtgctgccattcagttctacgagccgtacccgcag
gagtgcctgacggaccagcagctctcccagctcgacctcctcagcctggatccacacaca
ccctcctccacgtcctcctgctcctcctcctcttcctccaacagcagccctgcggctgca
gccggcagcatccccaccaccagcaccaacagcaccaccacccgcctggtttacaccaac
aagtgcatctgtcttctctcccactggcccttcttcgacgcttttcgcaagttcctcaca
ttcctctaccgctactccatctccggccctcatgccctgcccatcgagaagcacatctct
cattttatgcacaaagttcccttcccttcctctcagaggcctcgcatcctggtgcagctt
tcccctcacgacagcctgatgctgagtcagccagtgtcttctcctctaccgctcagcggt
ggccgcttttccacgctgctgctgaacctgggaccagagaatgccgtcaccctgctggtg
ttcgccgtcaccgaacacaagatcctggtgcactcgctccgaccggccgtactcaccagc
gtcacagaggctctggtgtctatgatcttcccgttccactggccgtgcccgtacattccc
ctgtgcccgctggcgttggctgacgtgttgagcgccccctgtccgttcattgtcggcgtg
gactctcgctacttcgacctgtacgaccccccgccggacgtgagctgcgtcgacctggac
accaacaccatcttccataatgaagataagcgagccctcacgtggaagatcctgccaaag
aaagcctgtaagaacctgatgaatgtgctgagcaatctccaccagcagctgctcgacggt
cagcaccgacccgacgggctgccggagctgagcatgagcgactcgtcggagctgagctgc
ggcaagagcctccacatgctggagctggagatccaggaggccttcctgcgcttcatggcg
gccatcttgaagggctaccgctcattcctgcgacccatcacccaggcgccatcggagaag
gccacggacgccagttcgctgtttgacctacaaggcttcctgaagagccgcgaccgctca
caccagaagttctactcgctgatgaccaagacccagatgttcatccgcttcatcgaggag
tgctccttcgtcagcgacaaagacgccagcctggccttcttcgacgactgcgtggacaag
ctctacagttccgagcggagcgccgacaaaggaggcaaggtggacagcgagaagccggag
gagtccaggctgatcgaggttgatgaatcccagcgcagtgagcacacagtgttcatcaca
cctccagagctgcctcccctgcctgggggggaggagtatccgctctgctacaggtacgac
ggtttcccagtgttgagtcttgacctctttgaccccgtggagggcctacggaccccctcc
tcccgcctcgccgccagacacagctgccccgccagccccgcccccatgtttagacgcacc
aagcaggagatcaaattggcccagaaggtagcgaagaagtactcgtccgtccctcagctg
tggtccaagtgtctgctccgtcactgctacggtctgtggttcatctgtctgccagcgtac
gtgaaggtgtgtcactccaaggtgagggccctgcgcaccgcctacgacgtcctgcgcaag
atgcaggcgaagaagctacagcctcctgatgaggtgtgttaccgggtgctgatgcagctg
tgtggacagtacggtcagcccgtcctggcggtccgcgtcctcttcgagatgaagaaggct
ggaatccaccccaacgccatcacttacggctactacaacaaggccgtgttggagagcacg
tggccgtccagcaccagaggaggatacttcctgtggatgaagctaagaaacgtcatcctg
ggcgtggcgcagttcaaacgggctctgcggcgacacggccccgtcaccccgagccctttg
tcagatggcagcgacctggacgccgtgagtcacggcagcctggatagctccgtcgacact
aacccggccgactccgtcaaagtagaccccactgacgataggtctagcacagtcggccgt
gggggcggtggcgtgggcgccggggccccggtggcccattcacactgggggggctctgag
ctcagagaagccaccctccacccaggagaccagtcggacctgggctacaactcgctgtcc
aaagaggaggttcggcgcggagaccccggcgccccggacgccgcccccgacaaggacgac
aagaaggagagcgactgcagctccttgtcggagacggagagcgccaaaggaagcaaagac
tgccttcctcagctggaagtggacgtccactcctctttcaaaccacgcggcatcgtccgc
agcagcttccccttcgacgagtcgtcctgtaaacccaagagctccgtcagctcaggccac
gtcgccggcctcctcttcacctcctccctggacgagatcggcgaggtccgcgccaacagt
ttgctcaggagacacaagagcgctctggaggaggtggtggtgggcagcgccggcagtggc
tcggactggcagggcgcgaggggccgccggctgagcggcgacacggtgggcagcagcggc
agcggcaccaccgtcctcggcctgggcatgagccagggcgagaccgacccagacaagatc
gcaggacacctgggggccgatgccaaaatcctctccgctgccaacttcagtaagagcaag
aggcctcgttcgctggctctgggcggattagagggcgctgccgccagaagtctggaccac
agggaagaggaggaggaggaggaggaggagggacaggattccagcgatgaggacagaagt
aatacagacgccatctttgatttggaggatctggatttagacaaacccggcgccggcgct
catcgaccccacaaaactcacaagaaacttgtggagcgcagcgccagctacggcgccatg
agcacggcggcgtccagaggagccgtgaagcgcacgggcatcgagacgggcgacgaccct
ctgtcactgctggccgcggcgtcgcggtccgaggacctgtacccggaaggggacgaggtc
agcacgccgcgcgcccgcaggcacctggccagggagatcgagctctacatgaaccacatg
ggcagcccggtgagcagccgcacgcccagtctggacctgcaggacccggccagccccctg
ctcctccacccgtcctcgctctccgccccccgcagagccagcctgccccacggctccccc
ctcagggccgccggggtcccgcgctcccgcacgttccacccgccctcgccctcgcagccc
atcgcgcgccaacgcctgtggtcgtcccccccctgccgcagcgcgagcaccacgcccagc
cccagcccccgacccagcccctacagagagcgggcggacagaatgagcctggcgtcgccc
tcgccctcctcctcctccttcgccctggacactctgctcacgccgaagctggacgtcttc
aagaccagcgtggtgtcagcggggaagggcgtggcggagaaggcgagccgctggtattcc
cgcctcgccacctacaccacacctaccaaggacggtcacagtgaccgtctgagcgtggcc
tccctcggggtcggcgatccggacggctcctccctgctggacgaggaggaccgcggggag
tcggagagctccgtggtctcgccgctgaggaacggccccgccgggccccgcaggagcccc
agacgcagccccctccgcagccgactggacagccccaccgcggggtccggccacaccaga
cccacatctctgctgcctggatgcgtcctctctcctcccggcttccctctgcctgacaag
tcggacgtgggctcctcgcactacaccagcaacaccagcatcttcaacaactacgccatg
gagctgctgatctccagctgctctcgctgtaagacgtgcgactgtctggtgtacgacgag
gagatcatggccggctggacggccgacgactccaacctgaacaccacctgccccttctgt
gggaaccccttcctgccctttctcaacgtggagatcagggacatgcgaggacccggcaga
ctcttcctgaagggcagtccgtcggtggatgaggcgatgacctcatcgtgctcggcctcg
acgggtctggacacggggacgtccaccttgtccacgccctgtcccaccacggccgtctgc
cccccctcgcccgtgatcgctgtccaggagcgttcaggaggcagcaggactcaagggatc
aacatcccctcggaccaccgacagggggcgctgtcccccggggggcacatggcccgcagc
gtcagcgccttcgggcctctggacgacgcttcccgaaccgaccgctgtgtgccgacgtcg
ggcagcctgcccagccgcctcaacgagaccacggatccgctgaacatggagtggcggctc
cacaaccctgagccggtgacggttccctacctgagcccgctggtgctgtggaaggagctg
gagagtctgctggagaacgagggcgacccggtgatcacggaggctgacttggtcgaccac
caccccatcatctactggaacctggtctggtacttcagacgactggacctgcccagcaac
ctgcccgggctcatcctcacctcggagcactgcaaccgggactcgcaggttcctcgtcac
tggatgtcggaggacagtaaacacgtgttgatccagatcctgtgggacaatctgaagcta
caccaggagccgctgcagccgctctacatcgtctggaacacgtacaacgtgggttaccct
ctgtgccggccggtcccggaggaggagaggctgttcagcgaggagctgctgcagagcgtg
gtgaagagcatccagaggaacgacgtcggccgcccgatggctcagctgctgcagctgctg
caccagacgctcgggaccaagaggcagaggagtttgtacagagacatcctcttcctctcc
caggtggctctggggaaagataacatcgatatcgacgccttcgaccgcgagtacaagttg
gcgtacgaccgcctgacgccgggcctggtgaagctgacgcacaactgcgaccgtccgccc
agcacgggggtcatggagtgtcgcaggacgttcggagagccttacctgtaa
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