Scophthalmus maximus (turbot): 118302842
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Entry
118302842 CDS
T09850
Symbol
samd4a
Name
(RefSeq) protein Smaug homolog 1 isoform X1
KO
K27396
protein Smaug
Organism
smau
Scophthalmus maximus (turbot)
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smau03019
]
118302842 (samd4a)
Messenger RNA biogenesis [BR:
smau03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
118302842 (samd4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
SAM_2
Motif
Other DBs
NCBI-GeneID:
118302842
NCBI-ProteinID:
XP_035485217
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Position
4:1988135..2039172
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AA seq
732 aa
AA seq
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MMFRDQVGVLASWFKGWNECEQTVALLSLLKRVSRTQARFLQLCLEHSLAECTELQVLEG
EANNPGVISQWQGEPKERVISLVLTHLPLLKPGNVEAKGEYMRLLPRILAHTIEHGHHLE
ESRQLLSYALIHPATSLEDRAALALWLNHLEERAAARGDSLERPPPAGPHHHHHHHHHHQ
STPPSTLSSSGSSSSSTNTSSSGNLYSLHHHQRYGSDDRLNGWQSSRESGLGGGWHQQQQ
GCENGHLLLYPSSSVPTTINTVGTGGGGNTILTSGGGGSQQHSPLKRSVSLTPPMSGPSS
QTLGHVWLSQEDLRSARGPAPDHAPLSPQSSIASSGSGGSEHLDEAGLGGGSGLHRSSFH
DDGSGMRDVPSWLKSLRLHKYAALFSTMTYDEMMSLNEDQLEAQKVTKGARHKIVISIQK
LKERQNLLRSLEKDVLEGSNLRAPLQELHQMIMTPIKAFIGGEEASLQRPLLSAEGKSVA
PGSHLSGGGGGGGEAESGVSVIAEGDLPGQFTRVMGKVCTQLLVSRSDEDNISSYLQLID
KCLIHESFTETQKKRLLSWKQQVQRLFRSIPRKTLLDIAGYRPQRSRFGQSNSLPTAGCV
GGSVSARRSLRQFQMPSRSLPGARPGLLGSGGLLGPTPRSSSSTPTGPKQGRQGLWFANP
GGSNSMPSRTHSSVQRTRSLPVHTTPQTMVMFQQADLQLPVTEPDINNRLESLCLSMTEH
ALGDGADRTSTI
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgatgtttcgcgaccaggtgggcgtcctggccagctggttcaaggggtggaacgagtgc
gagcagacggtggctctgctgtcgctgctgaagagggtgagccggacgcaggcccgcttc
ctgcagctgtgtctggagcactccctcgccgagtgcaccgagctgcaggtcctggaggga
gaggccaacaacccaggagtgatcagccagtggcagggcgagcccaaggagcgcgtcatc
tcgctcgtcctcacccacctcccgctgctcaaaccgggcaacgtcgaggccaagggcgag
tacatgcgcctgctgccgcgcatcctggcccacaccatcgagcacggccaccacctggag
gagtcccgccagctcctgtcctacgccctcatccaccccgccacctccctggaggaccgc
gccgccctggcgctctggctcaaccacctggaggagagggccgccgcccgcggagactcg
ctggagaggccgccgcctgccgggccacaccaccaccatcaccaccaccaccaccaccag
tccacaccgccgtccaccctcagctcgtcgggctcctcctcctcctccaccaacacctcc
tcgtcgggcaacctgtactccctgcatcaccaccagcgctacggctccgacgaccggctc
aacgggtggcagagctccagggagtcggggctgggcggagggtggcatcagcagcagcag
ggctgcgagaacggccacctgcttctctacccgtcgtcctctgtgccgacgaccataaac
acagtgggaaccggcggaggcggaaacacgatcctgacgagcggcggcggcggcagccag
cagcacagtcccctgaagcgctccgtgtccctaacgcctcccatgagcggccccagcagc
cagaccctgggccacgtctggctctcccaggaggacctgcggtccgcccgaggcccggcc
ccggaccacgcgcccctctcgccccagagcagcatcgcctcctcgggcagcggaggcagc
gagcacctggatgaggccggtttgggaggagggtcgggtctgcatcgcagctccttccac
gacgacggcagcggcatgagggatgttccctcgtggctgaagagtctccgtctccacaaa
tacgccgccctcttttccaccatgacttacgatgagatgatgtcactgaacgaagatcag
ctggaggcgcagaaggtcactaaaggagcgagacacaagatcgtcatcagcattcagaag
ctcaaagagaggcagaacctcctgcgcagcctggagaaggatgtactggagggcagtaat
ctgcgcgctccgctgcaggagctacaccagatgatcatgactcccatcaaggcgttcatc
ggcggcgaggaggcctcgctgcagcgccccctgctgagtgccgagggcaagagcgtcgcg
cccggctcccacctgagcgggggaggcggcggtggtggggaggcggagtcgggcgtgagc
gtcatcgcagagggggatttacccggccagttcactcgtgtcatgggtaaagtttgtacc
cagctgctggtgtcgaggtcggacgaggacaacatcagctcctacctacaactcatcgac
aagtgccttatccatgagtccttcactgagacgcagaagaagaggctgttgtcatggaaa
caacaggtccagaggctgttcaggtccattcccaggaaaaccctcctcgacatcgcaggg
taccgaccgcagaggagccgttttggccagtccaactccctccccaccgctggctgtgtc
gggggcagcgtgtcggccaggaggagcctccgccagttccagatgccctccagaagtttg
ccgggtgccaggccgggcctgttgggcagcggggggctgctgggacccacaccgcgcagc
tccagcagcacacccaccggccccaagcagggcagacagggtctgtggttcgccaacccc
ggaggaagcaacagcatgccgagccggacccacagctccgtgcagaggacccgctcgctg
ccggttcacaccacgccacaaaccatggtcatgttccaacaagctgatcttcagttacca
gtgacggagcctgacatcaacaatcgccttgagtctctgtgtctgagtatgacggagcac
gccttgggagacggtgccgaccgcacgtcgacaatatga
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