Scophthalmus maximus (turbot): 118303331
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Entry
118303331 CDS
T09850
Symbol
cdkal1
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase [EC:
2.8.4.5
]
Organism
smau
Scophthalmus maximus (turbot)
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
smau03016
]
118303331 (cdkal1)
Enzymes [BR:
smau01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
118303331 (cdkal1)
Transfer RNA biogenesis [BR:
smau03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
118303331 (cdkal1)
Prokaryotic type
Methylthiotransferases
118303331 (cdkal1)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TraT
Motif
Other DBs
NCBI-GeneID:
118303331
NCBI-ProteinID:
XP_035485468
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Position
1:complement(8080393..8275903)
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AA seq
564 aa
AA seq
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MASTCDSLIDDIEDMVSSSDPTPHERQAARKSIIPRSRKRKELPIDEELQADSLIPGTQK
IWMKTWGCSHNSSDGEYMAGQLAASGYKMTDDPTEADLWLLNSCTVKNPAEDHFRNSIKK
AQDQQKKVVLAGCVPQAQPRMDYLKGLSIIGVQQIDRVVEVVDEAVKGHSVRLLGQKKDG
GRRLGGARLDLPKIRRNPLIEIISINTGCLNACTYCKTKHARGDLASYPIEELVERARQS
FQEGVCEVWLTSEDTGAYGRDIGTDLPTLLWRLVDEIPEGAMLRLGMTNPPYILEHLEEM
AKILNHPRVYAFLHIPVQSASDSVLMDMKREYCIDDFKRVVDFLKERVPGVTIATDIICG
FPGETGEDFQETIDLVKCYRFPSLFINQFYPRPGTPAAKMEQVPAHVKKQRTKELSHLFH
SYNPYDHQVGERQHVLVTEESFDAQYYVAHNKFYEQVLVPKRAEFNGKMIEVDIYEAGKH
FLRGRPVEDSQLFTPSIAAPLRKGEVSGLVQEQISNGIHSPDSMSSSSFLLMGSYSLDRE
VLKKLGIGLALAAAIAALLVEKLF
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atggcatctacctgtgattctctgattgacgacattgaggacatggtgtcttccagtgac
cccactcctcacgagagacaggctgcaagaaagagtatcataccgagatccaggaagaga
aaagagcttccgatcgatgaggagctccaagctgacagcttgatccctgggacccaaaag
atctggatgaaaacatggggctgcagtcataacagctcagatggagagtacatggctgga
cagctggcggccagtggatacaagatgactgatgacccaacagaagcagacctgtggttg
ctgaacagctgcactgtgaaaaaccctgcagaggatcacttcagaaactcaatcaaaaaa
gctcaggatcagcagaagaaggtggtactagcaggttgtgttccccaggcccagccacgt
atggactacctcaaaggactcagcatcattggggtccagcagattgatcgagtggtggaa
gtcgtggatgaggcagttaaaggccactcggttcgtctgttaggtcagaagaaagacgga
ggccggaggctcggaggagcaagacttgacctgcccaagatcagaagaaaccctctcata
gaaatcatctccattaacaccgggtgtctgaatgcatgtacctactgtaaaactaagcat
gccagaggagacctggccagttatcccattgaggagctagtggaaagagccaggcagtca
ttccaggagggagtgtgtgaggtctggttgaccagtgaagacacaggagcctatggtaga
gacatcggtacagacctgcccacattgttatggagattggtggacgagattcctgaagga
gccatgctgaggctgggtatgaccaacccaccctacatcctggaacacctagaggagatg
gccaagatattgaatcatccgcgtgtctatgccttccttcatattcctgtgcagtcggcc
tcagacagtgtactgatggacatgaagagggagtattgcatcgatgacttcaaaagagtg
gtggacttcctcaaagagcgggtcccaggtgtaaccatcgctacagatataatctgcggt
tttcccggcgagacaggtgaagacttccaagagacgatcgacttggtgaaatgctacaga
ttccccagtctcttcataaaccagttctaccccagacctggtacacctgccgccaagatg
gagcaagtaccagcacacgtgaagaagcagaggacaaaagaactgtcacatctcttccac
tcctacaacccctacgaccaccaggttggggagaggcaacatgtcctggtgacggaggag
tcatttgatgcccaatattacgtggctcacaacaagttctatgaacaggtgctggttcct
aagagggctgagttcaatgggaagatgattgaggtggacatctatgaggcaggaaaacac
ttcctgagaggtcggccagtagaagacagtcagcttttcacaccgtccattgctgcccct
ctacggaaaggagaggtgtctggtttggtgcaggaacagatttctaacggaatccacagt
ccggattcgatgtcctcttcgtcctttttgttaatgggctcctacagtctggacagggaa
gtgctgaagaagctggggatcgggctcgctctggccgcagctatcgccgccctcctggtg
gagaaactgttctga
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