Scophthalmus maximus (turbot): 118303455
Help
Entry
118303455 CDS
T09850
Name
(RefSeq) E3 SUMO-protein ligase ZBED1-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
smau
Scophthalmus maximus (turbot)
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smau03000
]
118303455
04121 Ubiquitin system [BR:
smau04121
]
118303455
Transcription factors [BR:
smau03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
118303455
Ubiquitin system [BR:
smau04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
118303455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dimer_Tnp_hAT
zf-BED
hAT-like_RNase-H
DUF659
Motif
Other DBs
NCBI-GeneID:
118303455
NCBI-ProteinID:
XP_035485479
LinkDB
All DBs
Position
1:24717146..24723028
Genome browser
AA seq
675 aa
AA seq
DB search
MEGKSSGPSCSGLNLVAHPRAKSKVWKYFGFDTDADGCILHWKRIYCRVCMSQIAYSGNT
SNLSYHLEKNHPVQFSEFLRSNSDHMREAFATAFSRIKTEPSVPHGQQQSQDTNSRHTLD
YENRRHNDLTTAIINFICEGLYPVSLVEERTFKSLMSTVDPGYSPPSKSDLAAKMVSQTY
CQIRDKVFSELAEVVNCGVTTDLWQSQTQNRTYISLSMHSVNYNSTSGFSMTNKCLKTFE
VLDDNTAENITRAMYEAFVEWGITHKVSGATTNGSVDIIKACSLLDLSVEMPCLGHTINR
AMDEAFQLPRVNSFLGCCRKLVDHFREPAMYLLREKQKQHGLTQCQLLTDRGRSWLATLV
MLQRLKEQRVALTSTLAESSSSHHFNFGGADWILLESLIEVLQPFKVVADMFTSCRYPTI
SMVRPVLHMLLNTTLKIKEGDLKETSMTKEVIFKVLSSTYSQNSQISQEISMFLNIATFL
DPRYKKLPFLSTQERSKVESNLIEDAKAILEKQISERACLDDLSLLSDEPPSKKWAPPGE
SSASSSTQVNPLAAIFCQSETDHGQEELHAQVVEELSNYKSQRVLGLNEDPLMWWTDHAA
LFPTLPKVLQKYWCVPATSVPCHRLFTSSGAFLCGKRNRIAPALVDQQVFLYENLRPYYA
AEPCEEDLNNSWEEH
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atggaggggaaaagctctggaccttcgtgctctggcctcaatttggtcgcacacccacga
gcaaaaagcaaagtctggaaatactttggctttgacactgatgcagatggctgcatattg
cactggaaacggatttactgtcgtgtttgtatgagtcaaattgcttactctggaaatacc
tccaatctgtcgtaccaccttgagaagaaccatccagtacagttcagtgagtttttgagg
agtaactcagatcacatgcgtgaggcattcgccacagcattctccaggataaagacggag
ccttcagttccccatggtcagcaacaatcccaggacactaattcaaggcataccttagac
tacgaaaacagacgacacaatgatctgacaacagctataatcaacttcatctgtgagggc
ctgtaccctgtatctctagttgaagagcgtacctttaagagcttaatgagtactgtcgat
cccgggtattctccacccagtaaaagtgacctggcagctaaaatggtttcccagacatat
tgccagatcagggacaaggtcttcagtgagcttgctgaagttgtgaactgtggagtaact
acagacctgtggcaaagtcaaacccagaacagaacatacatttcactctctatgcattct
gttaattacaatagtacatcgggtttctccatgaccaacaagtgcctcaaaacatttgaa
gtactagatgacaacacggccgagaatatcaccagagcgatgtatgaagcctttgttgaa
tgggggataactcataaagtcagtggtgccaccacaaatggttcagtagatattatcaaa
gcatgctcgctgctggacctttcagtggaaatgccttgccttggacacacaatcaaccgc
gcaatggatgaagccttccagcttcctcgggttaacagctttttgggatgttgccgaaaa
cttgttgatcatttcagagaacccgcaatgtatctgctgagagaaaaacagaagcagcat
ggcctcacccagtgtcaactcctgacggacaggggtaggtcgtggttggccacattagtg
atgttacaaagactgaaagagcaacgggttgctttaacttcaacacttgcagagagttcc
agcagccatcattttaactttggtggagcagactggattttattggagagcttgattgaa
gtcctccagccttttaaagttgtagctgatatgttcacttcttgcaggtacccaaccatt
agcatggtgaggcctgtacttcatatgctgttgaataccaccctcaaaatcaaagaaggg
gatctcaaagagaccagcatgaccaaagaggtcatctttaaggtcctgtccagcacctat
tcacagaattcgcaaatttcacaagagatctcaatgttcctcaacattgccacgttcctg
gatccccggtacaagaagttacctttcctttcaactcaggaacggtcaaaagttgagagt
aacttaattgaggatgcaaaggcaatccttgaaaagcagatttcagagcgagcatgtctc
gatgatttatccttgttgtctgatgagccgcctagcaaaaaatgggcacctccaggagaa
tcgtcagccagcagttcgacccaagtcaaccctttggctgccatattttgccagtctgaa
accgaccatggccaggaggagctacatgctcaggtggtagaggagcttagcaactataag
tcacagagagttctaggtctgaatgaagacccattaatgtggtggacggatcatgcagcc
ttgttccccaccctccccaaggtgctgcagaagtactggtgtgttcctgccactagtgta
ccttgtcacaggctgttcacttcatctggggcttttctttgtgggaagaggaaccggata
gccccggctctagtggatcagcaggtctttttgtatgagaacttgcggccctactatgca
gccgagccctgtgaggaggatttgaacaatagctgggaagaacactag
DBGET
integrated database retrieval system
