Scophthalmus maximus (turbot): 118306520
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Entry
118306520 CDS
T09850
Symbol
gsdmeb
Name
(RefSeq) gasdermin Eb
KO
K22146
gasdermin-E
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
118306520 (gsdmeb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
smau02000
]
118306520 (gsdmeb)
Transporters [BR:
smau02000
]
Other transporters
Pores ion channels [TC:
1
]
118306520 (gsdmeb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Gasdermin
Gasdermin_C
DUF6456
Motif
Other DBs
NCBI-GeneID:
118306520
NCBI-ProteinID:
XP_035485720
UniProt:
A0A2U9AYF5
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All DBs
Position
1:10784922..10790588
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AA seq
473 aa
AA seq
DB search
MFATATRNFVEEVDAGGLLIPVSSLNDTIALLTVVVKRRRFWCWQKPKYIPTDFDLNDIL
TGDSPLQPVAIESDFIKYNGTYGDNIQGAMDANFVRSGVSMQAKDSSKLQSSFGSLKKEE
ANVQKLLQESKNRVLDMSHCLIHQTKEKHRRILGIVKERIVTAMPCSVIEEVQQGGQCGA
GLSLLGIRGSKVSLKENGSLSKDSNVTMEIPTHTTIAYALIELEIKLDGCYELCLTSDTN
GGFEVDSSAKKGLLCVSGAPPHASENSRLRQDLEQLDDHFQLLSSLPDTTRSSLFQQFTK
VMQDQAAVTALQDALDQICLENSPDLGDNTTTESQKQNIQEILDLVEQCGQVGSAQTGQS
VLTALHLISSALDEMTSDRLAVFAMCCSHEVLQTMELLVQCVSGKGELLLSSADLTALTR
VVFERTAHLFASSNVSLKRDGDTLRTEINQAPGNLPLVLCIAVRGLASLTVCV
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgtttgccacagcgaccagaaactttgtggaggaggtggatgctggaggtctgctcatc
ccagtgtccagcctgaacgacaccatcgccctgctgacagtggtggtgaagcgcaggcgt
ttctggtgctggcagaagcccaagtatatccccactgacttcgacctcaatgacattctg
acaggagacagccctctgcagccagttgccatagagtcagacttcatcaagtacaatggg
acgtacggtgacaacatccagggagccatggacgcaaactttgtccgctccggagtgagc
atgcaggccaaagactcgtccaagctccagtcgtccttcggcagtctgaagaaggaggag
gccaacgtgcagaagctgctgcaggaatccaagaacagggtcctggacatgtcccactgt
ctgatccaccagacgaaggagaagcataggcggatattggggatcgtgaaggagcgcatt
gtgaccgccatgccctgctcggtcatagaggaggtgcagcagggggggcagtgtggagca
ggactcagcctcctcggaatcaggggctccaaggtctcattgaaagagaacgggagcctg
agtaaagacagcaatgtcaccatggagattcccacccataccaccattgcctatgccctc
atagaactggagatcaaacttgatggatgctacgagctgtgtctgacgtcagacaccaac
ggaggtttcgaagtcgacagctctgctaagaaaggactgttgtgtgtgtctggagctcct
ccacatgcttctgaaaatagccgccttcgacaagacctggagcaacttgatgatcatttc
cagctgctttcatctcttcctgacaccacaaggtcctctctgttccagcaattcactaaa
gtcatgcaggaccaagcagctgtcactgcacttcaggatgcgctggaccagatatgcctg
gagaacagtcctgacctgggtgacaacacaacgactgagtctcaaaaacagaacatccaa
gaaattctggaccttgtggagcagtgtggtcaagtggggtcagctcagacgggccagtca
gtcctcacggcacttcacctcattagcagcgccttggatgagatgacaagtgatcgtctt
gctgtcttcgcaatgtgttgcagccacgaagtgttacagacaatggagctgctggtgcag
tgtgtatcaggtaaaggagagttgctgctgagcagcgcagacctgactgcactgacgcgg
gtcgtctttgaaaggaccgcacatctgtttgcctcctcgaacgtgtctctgaagagagac
ggggacacgttgaggacagaaataaatcaagcaccgggaaacttgcctctggtactatgc
atcgctgtcagaggccttgcctcattgaccgtctgtgtttga
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integrated database retrieval system
