KEGG   Scophthalmus maximus (turbot): 118308107
Entry
118308107         CDS       T09850                                 
Symbol
xrcc1
Name
(RefSeq) DNA repair protein XRCC1
  KO
K10803  DNA-repair protein XRCC1
Organism
smau  Scophthalmus maximus (turbot)
Pathway
smau03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:smau00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    118308107 (xrcc1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:smau03400]
    118308107 (xrcc1)
DNA repair and recombination proteins [BR:smau03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     118308107 (xrcc1)
SSDB
Motif
Pfam: XRCC1_N BRCT BRCT_2 PTCB-BRCT LIG3_BRCT
Other DBs
NCBI-GeneID: 118308107
NCBI-ProteinID: XP_035485841
LinkDB
Position
1:17786042..17807465
AA seq 631 aa
MPEIQLKHVVSCSTEDTTHKADNLLSSDTYRKWKAARAGEKQTSVILQLEKEEQVHSIDI
GNEGSAFVEVLVGNSSAVRDQDYEVLLVTSSFMSPTESRNGTNMNRVRFFGPNQLQKSTS
QEKWDRVKIVCSQPYSKNIAYGLAFVKFHSPPDKNDPPPTTSPKLTKLGQFRVKDESPSS
GSNLQPGSLFFSRDSATKPSTSLKVSPQSEKLSYAAAALQSGGPSHSSGPASSSNSASPQ
PPAKKKFEFSKERQSALGPPPSKKLSPAGSPESKAVTPKNKPSPASVSNSSSARASPAQK
PSDKKRESQSKSETPPKKQKAKSQVTQQVPFNRIMEGVVFVLSGFQNPFRGELREKALDM
GGKYRPDWTPDSTHLICAFANTPKYSQVKSAGGIIVRKEWVMDCHKRKQKISFKRYLMDG
AESSSESEMEVDDQSEEEMSTKTPQKQERQVTPNKTPERRKKDDDEYAGSTDVDEPGDDD
DDESAVDTEDELQRVEKENRQKKAAAADVKMVKEEDPYGGSTDENTDAEAEEDHPIPELP
EFLSGKHFFLYGKFPNNERRLVLRYIVAFNGVIEDYMTEKVQFVVTSEGWHDSFEDALME
NGNLNFVKPAWIYAINERQKILPYQPYTVVP
NT seq 1896 nt   +upstreamnt  +downstreamnt
atgccagaaatccagctcaagcacgtcgtgtcctgcagcaccgaggacactactcacaag
gcggacaacctgctgagttctgacacctaccggaagtggaaagcagccagagccggggag
aagcagacgtcggtcattctgcagttggagaaggaggagcaggtgcacagcatcgatata
ggaaatgaaggctcagctttcgtcgaggtgttagttggcaattcctccgctgtcagagac
caggactatgaggtgcttctggtcacgtcttccttcatgtccccaacggagagtcgcaac
ggcaccaacatgaaccgggtgcgtttctttgggcccaaccagctgcagaagagcacatca
caggagaagtgggacagggtgaaaattgtgtgtagccagccatacagcaagaacatagca
tacggactggcctttgttaagttccattcaccgccggacaaaaatgatcctcctcccaca
acctccccaaaactgacaaagcttggacagttcagggtgaaggatgagtctccatcgtcc
gggtccaaccttcagcctggcagtctcttcttcagtcgggatagtgcgacaaaacccagc
acttccctcaaagtgtcccctcagagtgagaagttgagttacgctgctgccgccctgcag
tctggtggcccctcccactcatcaggcccggcttcctcgtccaactcggcctcaccacag
ccaccagcaaaaaaaaaatttgagttcagcaaagagcggcagtcggccctgggccctcct
ccttcgaagaaactcagcccagctggctcacctgagagcaaagctgtgacccccaaaaac
aagccaagcccagccagcgtgtccaactccagttctgcgagagcttccccggcacagaaa
ccttctgataaaaagagggagagtcagtccaaatccgaaacgccaccgaaaaaacagaaa
gcaaaatcccaggttacccagcaggtcccgttcaaccgtatcatggagggggtggtgttt
gtcctcagcggcttccaaaacccattcagaggggagctgagggaaaaggctctggatatg
ggaggcaagtaccggccggactggacgcccgactccacgcaccttatctgtgccttcgcc
aacacccccaagtacagccaggtgaaatccgcagggggtatcatcgtacggaaggaatgg
gtgatggactgtcacaagaggaaacaaaagatctcctttaaacggtatttgatggatgga
gcagagtcgagctccgagagcgaaatggaagtggacgaccagagtgaagaggaaatgagc
acaaagactccacagaagcaagagagacaagtcacccccaacaaaacaccagaaaggagg
aagaaagatgacgacgaatacgccggctccactgacgtggatgaaccaggagatgatgat
gatgacgaatctgccgtggacacggaagacgagctgcagagagtggagaaggagaacagg
cagaaaaaagcagcagcagcagatgtgaagatggtgaaagaggaggatccgtatgggggc
tcgacagatgaaaacacagatgctgaggctgaagaggatcatcccatccccgagctacca
gagttcctgagcggaaagcactttttcctctacggcaaattccccaacaacgagagacgc
ctggtgttgcgatacatcgtcgcctttaacggagttatcgaggactacatgacggagaag
gtgcagttcgtggtgaccagtgagggctggcacgactcttttgaagacgccctgatggag
aacggcaatctgaactttgtcaaacccgcttggatttacgccatcaatgaacgacagaag
atcctgccctatcagccctacactgtcgtcccctga

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