Scophthalmus maximus (turbot): 118308586
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Entry
118308586 CDS
T09850
Symbol
gdf6a
Name
(RefSeq) growth/differentiation factor 6-A isoform X1
KO
K20012
growth differentiation factor 6
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau04060
Cytokine-cytokine receptor interaction
smau04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
118308586 (gdf6a)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
118308586 (gdf6a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
smau04052
]
118308586 (gdf6a)
Cytokines and neuropeptides [BR:
smau04052
]
Cytokines
Transforming growth factors (RSTK binding)
118308586 (gdf6a)
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Gene cluster
GFIT
Motif
Pfam:
TGF_beta
TGFb_propeptide
SR-25
Herpes_IE2_3
PsbL
Motif
Other DBs
NCBI-GeneID:
118308586
NCBI-ProteinID:
XP_035485880
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Position
1:3867249..3875390
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AA seq
563 aa
AA seq
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MWACFPSAPQQPSALVWSPERKSHFFMVRPESSKSSSSSSSSSSSSTSSSSSSSSSPTLT
RKHHLRPRRRRRLLPTSNFSEPWWRGRGREGESWTRERVSPPKHLQVLLLLLPAMDASRA
VSLYLGLLLVFLGNIPCFQSAAIISPSAPRRSRGARISHHQDGQRSSKFLKDIFASPPHP
VSGHHGEDPRDAIVPHEYMLSIYRTYSAAEKLGLNASFFRSSKSANTITSFVDRGTDDLL
HSPLRRQKYLFDVSTLSDQEELVGAELRIFRRAPGDSQASLQTTGLYDIQIYPCRSDRPL
DSRSLDPLDSTKAGWEVLDVWDMFKAQQHHYHHPHHHQHHHHHHQVCVQLRVTLGKSDAE
VDLRPLGLDRSGRSQQEKAILVIYTRSRKRENLFSEMKEKIKSRRSVGEREKKEEAAAAA
RAAEQQGVSLRGAKGEGPRRRRRTALSNRHGKRHGKKSKSRCSKKALHVNFKELGWDDWI
IAPLDYEAYHCEGVCDFPLRSHLEPTNHAIIQTLMNSMDPNSTPPSCCVPTKLSPISILY
IDSGNNVVYKQYEDMVVEQCGCR
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgtgggcgtgtttcccctcggccccacaacagccctccgctcttgtgtggagtccagag
cgcaaatcgcacttcttcatggtgcgaccagagagcagcaaaagtagcagcagcagcagc
agctccagcagcagcagcaccagcagcagcagctccagcagcagctctccgacgctgacg
cgcaaacaccatctccggccacggcggcggcggcggctgctcccgacatccaacttctct
gagccgtggtggcgggggcgggggagggagggagagagttggacaagagagagagtttcc
ccccccaaacacctccaggttcttcttcttcttcttccagccatggacgcatctcgagcg
gtgtcgttatatctgggcctgctgcttgttttccttgggaatataccgtgcttccagtcc
gctgccatcatctccccctctgcgccgcggaggagcaggggcgcgaggatctctcaccac
caggacggacagaggtcgtccaaattcctgaaagacatcttcgcgtccccgccgcatccc
gtctcgggccaccacggcgaagaccccagggacgctatcgtgccgcacgaatacatgctc
tccatatacaggacatactcggccgcagagaagctcggactaaacgcaagctttttccgc
tcctccaaatccgccaacaccatcacaagttttgtggacagaggaacagacgatcttttg
cactctcctctgcgaagacaaaagtatctgtttgatgtctcaaccctttcagaccaagag
gagctggtcggggcggaattaaggatattcaggagagcgccgggggactcgcaggcctcc
ctgcagacgacgggcctctacgacatccagatctacccctgccgctcggaccggccgctg
gactccaggtccctggacccgctggactccaccaaggccggctgggaggtcctggacgtg
tgggacatgttcaaggcgcagcagcatcactatcaccacccccatcaccatcaacaccac
caccaccaccaccaggtgtgcgtgcagctcagggtcacactcggcaagtccgacgccgag
gtggacctgaggccgctgggcctggaccggagcggccggtcccagcaggagaaggccatc
ctggtgatctacacccgctccaggaagcgggagaacctgttcagcgagatgaaggagaag
atcaagtcgcggaggtcggtgggcgagagggagaagaaggaggaggcggcggcggcggcg
agggccgcggagcagcagggcgtgtcgctgaggggggccaagggagaggggccccggcgt
cggcggaggaccgcgctgagcaaccggcacggcaagcggcacggcaagaagtccaagtcc
cggtgcagcaagaaggcgctgcacgtgaacttcaaggagctcggctgggacgactggatc
atcgcgccgctggattacgaggcgtaccactgcgagggcgtgtgcgacttcccgctgcgc
tcgcacctcgagccgaccaaccacgccatcatacagacgctcatgaactccatggacccc
aacagcaccccgcccagctgctgcgtgcccaccaagctcagccccatcagcatcctgtac
atcgactcgggcaacaacgtggtgtacaagcagtacgaggacatggtggtggagcagtgc
ggctgcaggtag
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