Scophthalmus maximus (turbot): 118308768
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Entry
118308768 CDS
T09850
Symbol
ttc28
Name
(RefSeq) tetratricopeptide repeat protein 28 isoform X1
KO
K24936
tetratricopeptide repeat protein 28
Organism
smau
Scophthalmus maximus (turbot)
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
smau03037
]
118308768 (ttc28)
Cilium and associated proteins [BR:
smau03037
]
Motile cilia and associated proteins
Other motile cilia associated proteins
118308768 (ttc28)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
TPR_7
TPR_1
CHAT
TPR_2
TPR_8
TPR_10
TPR_MalT
TPR_17
TPR_16
RPN7
Rapsyn_N
TPR_11
TPR_NPHP3
TPR_14
TPR_6
TPR_19
PUB
TPR_9
SNAP
Motif
Other DBs
NCBI-GeneID:
118308768
NCBI-ProteinID:
XP_035486043
UniProt:
A0A8D3DUG8
LinkDB
All DBs
Position
1:complement(18596773..18746625)
Genome browser
AA seq
2575 aa
AA seq
DB search
MERQRARKDKFSLFGSRSTSRSANPSSSTSSSSSPVIPSTATMKRVERPPGCDPPGLSKA
EFLEHVRRSNQACQQGDYALAVHLYSEALTADPQNCILYSNRSAAYLRLGQYSTALDDAI
KARLINPKWPKAYFRQGVALQYLGRHADALAAFASGLAQDPKSLQLLVGMVEAAMKSPLR
DSLEPTYQQLQKMKLDKSPFVVVSVIGQELLTNGFHGASVVVLEAGLKIGTCSLKLRGSV
FSALSSAYWSLGNSEKSTAYMQQDLEVTKTLGDQSGECRAHGNLGSALFSRGSYREALAN
HRNQLVLAMKLKDREAASDALSSLGHVYTAIGDYPNALASHKQCVLLARQTQCQLSEARQ
LGNMGAVYTALGDFTNAVQCHDQHLDIAKTLDIRREEARAYSNLGSAYHSQRDFDKAISY
HTRVLELAQELADRAIEMRAFAGLGHAARCMQDLERALMHHQHQLEIAQELQDRAAQGRA
SSNLGIIHQMKGEYEAALKLHKAHLSFVQELGDYAAQGRAYGNMGNAYHALGIHDQAVRY
HRQELQMSLEVNDRPSQASTHGNLAVVYQALGAHDRALQHYLHHLTIARELRDTQSEARA
LANLGNFHSWRGEYAQALPYYQQYLALAPGLQDLEGEGKVCHNVGYAHYCLGQYRDAVRY
YEQDLALAKDLQDKLAQAKAYCNLGLAHKALGEYNKAEECQRYLLSLSQALDNTQAVFRA
FGNLGDVCVCRSDLPGAVRFYQQQLTLAQKVSDQKMEADAYSALGSVHRRLRQLDTALSF
HSQELTVWKDIGDQQGECRALGHLAAVHMALGDYATTFQCYETQLGLAQGLRDARLEAQV
HGNMGITKMNMGVFEESIGYFEQQLAMLQQLSGTESMMDRGRAYGNLADCYEALGDYEEA
IQYYEKYLTVAQSLNHVQDQEKAYKGLGNAHRSIGSLQQALVCFEKRLVVAHELGGEGGG
KAQAYGELGTLHSQLGNYEQALSCLEHQLNIARTAGDKSLEAEASDTLGGVYQLMADNET
ALQWHQRALDIAEQTRCVSSQGRAYGNLGLTYEALGNYERAVVFQEQHLSVAAQTNDLIA
KTLAYGSLGRIHHALQNYAQAVMYLQEGLRLAEQLGRREEEAKLRHRLGLSLWASGNLEE
AQHQLYRASVLFETIRHETQHSTDYKLSMFDLQTSSYQALQRVLVNLGRHDEALAIAERG
RTRAFADLLVERQKGSQHAASTDPYIPVTVEHILETVNAQKAMILYYSLAAGFLYSWLIS
PGTGIVKFNEVYLGEPGAEESELQDGVGGSPQGGGGGAGAFPLSLDQHIYNTREALGVDS
HYSRGCSSSETESEMGDLLEQQFEELNNKLTSATDPTGYLRMVSRNNLFNRSCQSMTSLY
SATVSPVKDSLSSLPFRPSNISKPPLRALYDLLIAPMEGGLMHNSGPVGRHRQLVLVLEG
ELYLIPFALLKGSSSNEYLYERFSLISVPSLASLGTTIKHHHRRGGPSLCTDGGSVAAVV
GAPRLPSSVMDRWLWGPLPSAQDEALWLGEQLGCHPLTGANATRERLLAALSQAECVHFA
THISWKLAALVLAPSPEYTGGEGPGSRPKEKSPCGASTSGELEDRDGEVKGSFLKSHSSP
ERLRGAEEVSEDGDSVCDVESVCDSPPLHDFLLTAADILGLCLTVKLVVLRLYPESSSRV
TADGVVGLTRAFLAAGVQCVCVSLWPVPIAASKLFTHTFYTALLNGTKASAALTEAMKTL
QSSKHFSHPSNWAGYMLIGNDVKLNSPMSLVGQALAEILQYPERARDALRVLLHLVEKSL
QRIQSGQCNPMYTSQQSVENKVGGVPGWQALLSAVGFRLDFSGSGAGLPAAVFFPTSDPG
DRLQQCSTTLQSLLGLTPPALQALCKLVTTSEAGEQLIHKAVKSMVGMLHQVLVQLQSGD
KEQDFSLAPIQVTISVQLWRLPGCHEFLAALGFDLCEVGQEEVVLKTGKQASRRIMHFAL
QSLLALFDSTELPKRLSMDSSSSLESLSSSQSTSQPHSLPLSFGCYPPQPSFLPPVCPDN
LSCDAISVYSLSSLASSLSFLSRPEPAGSDIISQRLHQQEPDKPRGGAGLYTSLRRSGGL
SRCRHTNHEGVGGEGEDEEYEGFSIISSEPIGRGGRDCDTLPLPAGHRHGRGGAGRGSNG
GHGYPITISSKGSISTPTSPMKAPPLPPTVSSSPKLRQGISSPQRLTKGKVSSSESDQSS
TETDSTVKSQEERTGPAGQMDPQELAQKILEETQSHMQAVESLQKANARGKTLRVPEGRE
EAHARQRSLSNPTTPTLTPTGGARGFQPSETSAFSRPPSRASPKACSSPLSLPSHRSPLS
TSVSTPLPTQPKPPSRSSSLQKISSGYSSPARSSSPLSLSVKDQGSPLPRASPDVHAQSQ
LKLKYPPSPYSAHISPSRSPADSAPSPALSYSSTGSVSASSSPANTPEPNQSIRDNKVQA
IHNLKTFWANASQKHEVPCPASLLQGGNKKMSTVQKDVLGLLNLSPQRESLGKHREGSED
KNADNRPNGHQKLEAKPPPPPSANVPTISKGGSRLPSGNGYKFFSPGLFFPSSKC
NT seq
7728 nt
NT seq
+upstream
nt +downstream
nt
atggaaaggcaaagagcaaggaaagacaagttctccctgtttggttctcgctccaccagc
aggtccgccaacccttcttcttcaacctcctcctcttcatcccctgtgatcccgtcgacg
gctacaatgaagagggtggagagaccgcccggctgcgaccccccagggctgagcaaagcc
gaatttctggagcacgtgcgtcgcagtaaccaggcctgccagcagggggactacgctctg
gctgtgcatctgtacagcgaggccctgactgctgacccgcaaaactgtatcctgtacagt
aaccgctcggctgcctatctcagactgggtcagtacagcactgccctagacgacgcgatc
aaagcacgtctcatcaaccccaagtggcccaaggcctactttcgtcagggggttgccctg
cagtacctgggtcggcatgccgacgccttggcagcattcgcctccggcctcgcccaagat
cccaagagtctccagctgcttgtgggcatggtggaggctgccatgaaatcgcccctcaga
gactcccttgagcccacctaccagcagctgcagaagatgaagctggacaaaagcccgttc
gtggtcgtgtccgtcatcggtcaggagctgctgaccaacggtttccacggagcctctgtt
gtggtgctggaggcagggctgaagatcggcacatgctccctgaagctgcgtggatccgtc
ttctcggccctgagctctgcctactggtctttgggcaactcagagaagagcacggcctat
atgcagcaggacctggaggtgacaaaaactttaggtgaccagtcaggtgaatgtcgcgcc
catgggaaccttggctccgccctcttctccagaggcagttacagagaagcactggccaac
cacagaaaccagctggttctggccatgaagctcaaggacagagaggctgcatctgatgcc
ctcagcagtctgggtcatgtgtacactgctatcggtgactaccccaacgcactggcgagc
cataagcagtgtgtgctgttggcgcggcagacccagtgtcagctctctgaggctcgccag
ctcggtaacatgggtgctgtgtacacggcactgggagacttcaccaatgccgttcagtgt
catgaccagcacctggatattgcaaagactttggacatccggcgtgaggaagcgcgggct
tacagcaacctgggcagtgcctaccactctcaacgggactttgacaaggccatatcatat
cacacaagagtactggagttggcacaggagctggccgacagggcgatcgagatgagggca
tttgctggtctggggcatgctgcccggtgcatgcaggacctggagagggcgcttatgcac
caccaacatcagctggaaattgctcaggagctgcaggacagagccgcacagggcagagcc
tcttccaacctgggcatcatacaccagatgaagggggagtatgaggcagcactgaagctc
cacaaagcccacctgtcctttgtccaggagctgggtgattacgctgcccaggggagggcc
tacggtaacatgggcaatgcctaccatgcactcggcatccatgaccaagctgtccgctac
caccgacaagaactgcagatgtcactggaggtgaacgatcgtccatcgcaggcctccaca
cacggtaacctggcagtggtgtaccaggcactaggtgctcacgaccgagctctccagcac
taccttcaccacctgaccattgcgagagagcttcgagacactcaaagcgaagcacgagcg
ctagcaaacctgggtaacttccacagctggaggggtgaatacgctcaggccttgccatac
taccagcagtacttggctctggccccaggcttgcaggatctggagggagaaggcaaagtt
tgccacaacgtcggctatgctcactactgcctcgggcagtacagagatgctgtcaggtat
tatgagcaggacctggccctggctaaggacctccaagacaaattagcccaggctaaagcc
tactgtaacctcggcctggcccacaaagcactgggggagtacaacaaagcggaggagtgt
cagagatacctgctctctctgtcacaagccctggataacacacaggcagttttcagggct
ttcgggaatcttggggatgtgtgtgtgtgtcgcagtgatcttccaggagctgtgcggttt
taccagcagcagttaacactggctcagaaagtcagtgatcagaagatggaagctgacgcc
tactcagcactgggatcagttcacaggcggctccggcagctggatacagccttgtccttc
catagccaggaactgaccgtctggaaggatataggtgatcagcagggggagtgccgcgcc
ctcggccacctggcagcagtgcacatggcccttggagactacgctacaaccttccagtgt
tacgagacccagctaggcttggctcaggggctcagggatgcccgtctggaggcccaggtc
cacgggaacatgggcatcaccaaaatgaacatgggagtgtttgaggaatcgattggctat
tttgagcagcagctggcaatgctgcagcagctgagtggaactgagagcatgatggacagg
ggtagggcctatgggaacctggcagactgctatgaggctctgggagactacgaggaggct
attcagtactatgagaagtacctgactgtggctcagagtctcaaccatgtccaggaccag
gagaaagcttacaaaggcctcggcaatgcacacaggtctattggtagtctccagcaggca
ctggtgtgctttgagaagcgactggtggtagctcatgagctgggaggggaaggaggtggt
aaggctcaggcttatggggagctgggcaccttacacagccagctaggcaactatgagcag
gccctctcctgcctggagcaccagcttaacattgcacgcacagcaggggataaatccctg
gaagcagaagcgagcgataccctcggaggcgtttatcaactgatggcagacaacgagaca
gcgttacagtggcaccaaagggctctggacattgcggagcagacgagatgtgtgagtagc
cagggtcgagcctacggcaacttgggactgacctatgaagcccttgggaactatgagcgg
gccgtggtcttccaggagcagcacctgagtgtggcagcacagaccaatgatctgatagct
aaaactctggcctacgggagcctggggaggatacaccatgcactgcaaaactatgcacag
gctgtgatgtacctgcaggaaggtctgcgtctggcagagcagttaggtcgcagagaagaa
gaagctaagctacgccaccgtctgggtctgtccctgtgggccagtgggaacctggaggag
gcacaacaccagttgtacagagcatctgtgttatttgagacgattcgccatgagacacag
cacagcacggattacaagctctcgatgtttgacctgcaaaccagctcgtaccaagctctc
cagcgagtccttgtcaacctaggccggcacgatgaggcgctggccatagcagagcgaggg
cgtacacgtgcctttgccgatcttctggtcgaacgccagaaaggaagtcagcatgcggcg
agcacagacccttacatcccagttactgtagagcacatcctggagacggttaacgcccag
aaggcaatgatcctctactattctctggcagcaggctttctgtacagctggctgatatct
ccaggaacaggtattgtgaagtttaatgaggtgtatcttggagagcccggagcggaggag
tctgagctccaggatggtgtcggtgggagcccacagggtggaggaggaggagcaggtgca
tttcctttgtcgctagaccagcacatctacaacaccagagaggctctgggggtggacagc
cattacagcagaggttgttccagcagcgagaccgagagcgagatgggggatctgttagag
cagcagtttgaggagctgaacaacaagctcacctcagccaccgaccccacaggctacctc
cgcatggtgtccagaaacaacctcttcaacagaagctgtcaaagcatgacgagcctgtac
agtgccactgtatctccagtgaaagacagcttatcctctcttccttttcgaccaagcaac
atcagcaaacctcctctgcgagccctttatgacttactcatagcaccaatggaagggggc
ctgatgcacaacagtggtcccgtgggcagacacagacagctcgtattggtgttggaggga
gaattgtacctgatcccatttgccttgctcaaaggcagctcctcaaatgagtacctgtat
gaaaggttcagtctcatttctgtaccgtctttagccagcctgggaaccaccatcaagcat
catcatcgccgcggtggcccctccctttgcacagatggcggctcggtggctgcagtggtt
ggagctcctcgcctgccctccagtgtgatggaccgctggttgtgggggccccttccctca
gcccaagatgaagctctctggctgggggaacagctcggttgtcatccactaactggagca
aatgccacaagggagcgcttgctcgcagctctgagtcaggcggagtgcgttcactttgcg
actcacatatcctggaagctcgctgccttggtcctcgcccccagcccagagtatactggg
ggagagggcccaggaagccgacccaaggagaaatccccatgtggtgcgtcgacctcaggc
gagcttgaggatcgggatggggaggtcaaagggtcgtttttaaagagccacagcagcccg
gagagactcaggggagcagaggaagtgagtgaggatggggacagtgtgtgtgatgtagag
agtgtgtgtgacagtccaccacttcacgacttcctcctcactgctgctgacatactgggt
ctgtgcttaactgtcaaactggtggttctgaggttatacccagagtccagcagcagggtg
actgctgacggggtggtgggtctgacccgggccttcttggctgcaggtgtccagtgtgtg
tgtgtctccttgtggcctgtgccaatagctgcctccaagctgttcacacacaccttctac
acagcccttctcaacggcaccaaagccagtgctgctctgacagaggccatgaagacactg
cagagcagcaagcacttctcacacccctccaactgggcgggttacatgttgattggaaac
gatgtgaagctgaacagccccatgtcgctggtgggccaagccctggcagagatcctgcag
tatcctgagagggccagggatgccctcagagtgctgttacacttggttgagaagtcattg
cagcgcattcagagtggccagtgtaacccaatgtacacatcgcagcagagcgtcgagaat
aaggtcggcggggtgcccgggtggcaggccctcctgtctgcggtgggtttccgtttggac
ttctctggtagcggcgcaggtctccctgcggcagtcttctttcccacgtcagaccctggg
gaccggctacaacagtgcagcaccactttacagtctcttcttggtcttactcctccagct
ctgcaggctctatgtaaattggtcacaacgtctgaggccggagagcagctcattcacaag
gcggttaaaagcatggtgggaatgcttcaccaggtgttggtgcagttacaatccggggac
aaagagcaggacttttcgctggctcccattcaagtgacgataagtgtgcagctctggagg
ctcccgggctgccacgagtttctggctgcactcggcttcgatctttgtgaggtgggtcag
gaggaggtcgtgctgaagactggaaaacaggccagcagacgcatcatgcattttgccctt
cagtctcttctggcactgtttgactcaacagagcttcccaagagactgagcatggacagt
tcttcctccctggaatccctgtcgtcctcccagtcaacctcccagcctcactctttaccc
ctctcgttcggttgctacccacctcagccctccttcctgcccccagtctgcccagacaac
ctctcttgcgatgcaatctctgtctacagccttagctcccttgcgtcctctctcagtttc
ctgtctcgtcctgagccagcaggaagtgacatcatcagccagcgcttgcaccaacaggag
ccggacaaacctcgcggtggggcaggcctctacacctcgcttcgccgttcaggtggcctg
tcaagatgtcgccacaccaatcacgaaggagtaggtggagaaggggaggacgaggagtat
gagggtttctccattataagcagtgagccgataggacgaggagggagggactgtgacaca
ctgccactacctgcaggacacagacatggcagaggcggtgctgggagaggatctaatggg
ggtcatgggtatccaataacaatatcctccaagggaagcatcagcacacctacatctccc
atgaaagctccaccactgcccccaactgtttcatccagccccaagctcagacagggaatc
tcatcccctcagaggctaacgaagggcaaggttagcagctctgagtcggaccagtcgagt
actgagacagacagcacggtcaagtcccaagaggagaggacagggcctgcgggacaaatg
gatccccaggaactggcccagaagatcctggaggagacccagagccacatgcaagctgtg
gagagcctgcagaaagcaaacgcgagagggaagacactgagggtgcctgaggggagagag
gaggcacatgccagacagcgctctctctccaatcccacaaccccgactttgactcccact
ggaggagcacgcgggtttcagccctctgagaccagtgcatttagcagaccacccagtcga
gcaagtccaaaagcttgctcctctcctctttctcttcctagtcaccgttcacccctctcc
acttctgtctcaacacctctcccgactcagcctaaaccaccatcccgctcctcttcccta
cagaaaatcagctccggctacagcagtccggctcgttcctcttctcctctatctctctct
gtgaaagaccagggttcgcctctccccagggcttccccagatgtgcatgcgcagtctcag
ctcaaactgaaatatcctccctcaccctactctgcccacatctcaccttcccgctctcct
gccgatagtgccccgtcgccagctctttcctattcctccacgggatctgtttcggcttct
tccagccctgccaacacccctgaaccgaaccagtcaatacgggacaacaaagtccaggca
attcataatttaaaaaccttctgggccaacgctagccagaaacatgaggttccctgccct
gccagtttactccaaggtgggaataagaaaatgagtacagttcagaaagatgttctgggt
ttgctgaatctctcacctcaacgtgaatctctcggcaaacaccgggaaggatctgaggat
aaaaatgctgacaacagaccaaacggtcaccaaaaactggaggctaaaccacccccacct
ccatctgctaatgttcccacaatctctaaaggaggcagcagacttccctctgggaatggc
tacaagtttttctcacctggacttttttttccatcctctaaatgttga
DBGET
integrated database retrieval system
