Scophthalmus maximus (turbot): 118308897
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Entry
118308897 CDS
T09850
Name
(RefSeq) DDB1- and CUL4-associated factor 1 isoform X1
KO
K11789
DDB1- and CUL4-associated factor 1 [EC:
2.7.11.1
]
Organism
smau
Scophthalmus maximus (turbot)
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
smau01001
]
118308897
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
smau04121
]
118308897
Enzymes [BR:
smau01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
118308897
Protein kinases [BR:
smau01001
]
Serine/threonine kinases: Other
Other
118308897
Ubiquitin system [BR:
smau04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
118308897
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40_Prp19
Beta-prop_WDR3_1st
Beta-prop_EML_2
Beta-prop_WDR5
WD40_CDC20-Fz
EIF3I
Beta-prop_WDR3_2nd
WD40
LisH
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_WDR19_1st
WAPL
Beta-prop_RIG_2nd
Beta-prop_WDR36-Utp21_2nd
WD40_WDHD1_1st
Motif
Other DBs
NCBI-GeneID:
118308897
NCBI-ProteinID:
XP_035486229
UniProt:
A0A8D2ZVQ1
LinkDB
All DBs
Position
6:complement(4157409..4173087)
Genome browser
AA seq
1586 aa
AA seq
DB search
MSSPGEEQQPSAAVSAILSSAMSAAVSAAMAVAMATDAKADLAKLLDEWEEAQRGTTEQL
VSILTKISELIEKETGEYHKADPDPFDDRHPGRANPDGMLGQLLKMLFMNNDFTNALLDT
YIMTSRELSLKTAACRLLQNIMPGLDTAVVFQEKEGLVETLFGFARESERPLCVYATGLL
ARAMGNQEVATSKRQQNTQLVPVMIQRLHELQAEEAKNHLSPATSQNLPQDSQVEATRTS
TISTNQRDKTEGEDVGEDGHGENGRPVSKACSKPLSLLGSAQKNGVSSSSSSSSSSGSSS
NRPPPDSVYQASGDAASRETEDRRGGLKRRAVKENGRKAKQKINFPSSSSYGADEDLDRT
RTSDQPTSSSWSEMSSMVIGSEYCLSPLSPAMEQRLILQYLTPLGEYQELLAIFMQQNTN
LLLMNYIDLRQTKNVQLTFEALLYLASLLLHKKFVTEFIAHGGVQKLLEIPRPSMAATGV
SLCLYYLAYNQDAMERVCMLPDGVLSDMVSYALWLLESSHASGVCHATMFFSISFSFRAV
LQLFDHQDGLRRLVNLISTLEILNTETEVSIMSDDQVFSSRQTAKHTCMAVRRYFEAHLA
VKTEQVKQSLHTSDKDTIVRQQQFSKAYTYTREQVIEMMEFLIECGPPQLLWEPVELFYK
LSCVPLMLQLISTACDWRTYYGRSDTVRYALDILAILTVVPKVQLVLADTVVVVDETRMP
VSTVGMSIILGVAEGEVFVNDAEIQKSALQVIINCVCAPDQSLNTVGVYAVAPFHPQQPP
VPHNRVLAHMWQVVQNNNGIKVLLSLLAVKMPITDADLIRALACKALVGLSRCTAIRQII
SKLPLFASGHIQQLMKEPVLQDKRSEHVRFCRYAVEMTERVSGKPLLMGTDVSLARLQRA
NVVAQSRITFSEKELLVLIRNHLVAKGLVDTACALVKEANLGSYCPISSCVTPTPSSVIP
RTCRLAGGIAARAASHIGSSPVSSLPALSSTSPPLPSPCRALVTPHPPCSSSSSTALPTP
QGSHPVGRILFTRERPVANCNSGKKLRALKQKSDHGAFIQTPAMKKTLERHLPSPPTLDS
IITEYLREQHARCPNPVTTCPPFSLFTPHRCPEPKQRRQALPNFTARLGSRVLYQKYRGV
DRGCLDRHLIFSRFRPMSVFHEGDSDESGFTCCAFSARERFLMLGTCSGHLKFYNIASGE
EEANYTCHTSAITHLEPSRDGKFVLTSASWSVPLSALWSMDGVFSLKNSFVDDHYVEFSK
LSQDRVIGTKDQVAHIYDIQTGQKTLTLNDPALANNYKRNCATFNPTDDLVLNDGVLWDV
RASRAVHKFDKFNMNISGVFHPNGLEVIVNTEIWDLKTFHLLHTVPALDQCRLVFNSNAT
IMYGAMLQADDEDDAMDQQMKSPFGSSFRTFDATDYKPIATVDVKRNIFDLCTDEKDCYL
AVIENQDTVSLDTVCRLYEVGRQKLAEEGDDDDDQDDDDDQDEDDDSSDTDDDDDDDMDT
DPLIDELANRENGERVDSPTEEEIADLLGGDSSDDNNNDDSEDDSDASHRSGDGSDPFDH
DSADSDDEQRVDDDIRLLRSIHRWFS
NT seq
4761 nt
NT seq
+upstream
nt +downstream
nt
atgtcttccccaggagaagaacaacaaccatcggcggctgtgtcggccatcctgtcatct
gccatgtcggccgccgtgtcggccgccatggccgttgccatggccacggacgccaaggcg
gatctcgccaagctgcttgacgagtgggaggaagcgcagcgaggcaccacagagcaactg
gtgtccatccttacaaagatctctgagctgattgaaaaggagacgggagagtatcacaaa
gcagatcctgatccgtttgacgaccgtcatccaggtcgggcgaacccagacgggatgctg
ggtcagctcctgaagatgctcttcatgaataacgacttcactaatgcgctgttggacacg
tacatcatgaccagcagagagctgagcctgaaaaccgccgcctgccgcctccttcagaac
atcatgccgggcctggacacggccgtcgtcttccaagagaaggaggggctggtggagaca
ttgttcggctttgcccgtgagtccgagcggccgctgtgcgtctacgccacggggctgctg
gccagagccatgggcaaccaggaagtggcaaccagcaaaagacagcagaacactcagctg
gtaccggtcatgattcagcgcctgcatgagctgcaggctgaggaggccaagaatcacctc
agtcccgccacgagccagaatctacctcaggactctcaggtggaagccacacgaacctca
accatctcaacaaaccagcgagacaagacggagggtgaagacgttggcgaggacggacac
ggagagaacggcaggccagtgtcgaaggcctgttccaaacctttgtccctgctcggatcg
gcccagaaaaatggcgtcagcagcagcagcagcagcagcagcagcagcggatccagctca
aacagaccgcctccagactcggtgtaccaggcgagcggcgacgctgcctccagggagacg
gaggacaggcggggaggacttaaaagacgggcggtaaaggagaacgggaggaaggctaag
cagaagatcaacttcccctcctcctcctcctatggggctgacgaggacctggacagaact
agaaccagcgaccagccgaccagcagctcctggtccgagatgagctcgatggtgatcggc
tcggagtactgcctgtcgccgctgagcccggccatggagcagaggctcatcctgcagtat
ctgacgccgctcggggaataccaagagttgctcgccatcttcatgcagcagaacacaaac
ttgttgttgatgaactacattgacctcaggcagaccaagaatgtacagctcaccttcgaa
gcacttctgtatctcgcctcgctgctcctccacaaaaagtttgtgacggagttcatcgct
catggcggagtgcagaagctcctggagatcccgaggccttctatggccgcgaccggagtc
tcgctctgcttgtactatctggcgtacaaccaggacgcgatggagagggtgtgcatgctc
ccggacggcgtgctgtccgacatggtgtcctacgctctgtggttgctggagtcgtcccac
gcttcaggcgtgtgccacgccaccatgttcttctccatctccttctccttcagggcggtg
ctgcagctctttgaccaccaggacggcctgcgcaggctcgtcaacttgatcagcacgctg
gagatcctgaacacagagactgaggtgtccataatgagcgatgaccaggtcttctccagc
cgacagacggccaaacacacctgcatggccgtccgcaggtactttgaggctcacctggca
gtgaagactgagcaggtgaagcagtcgctgcacacgtcggacaaagacaccattgttcgc
cagcagcagttttccaaggcttacacctacaccagagagcaggtcattgagatgatggag
ttcctcatcgagtgcggacctccgcagctcctctgggaaccggtcgagcttttctacaag
ttgtcctgtgttcctttaatgctgcagctcatatcaacagcctgtgactggaggacttac
tatggcaggagtgacacggtgcgttatgccctggacatcctggccatcctcacggtggtt
cctaaagtccagctggtgctggctgacacggtcgtcgttgtggatgaaaccaggatgccc
gtttccaccgtgggtatgagcatcatcctgggcgtcgcagagggcgaagtgttcgtcaat
gatgctgagattcaaaagtctgcactacaagtgataataaactgtgtgtgcgctccagac
cagagcctgaacactgttggtgtttatgctgttgcccccttccacccccagcagcctccg
gtgccccacaacagggtgctggcccacatgtggcaagttgtgcagaacaataacggtata
aaggtgcttctgtctctgctggcggtgaagatgccgatcacagacgccgacctgatccgc
gctctggcctgcaaggctctggtcggtctgtcccgctgcacggcgatcagacagatcatc
agcaagctgccgctgttcgccagtggccacattcagcagctgatgaaggagccggttctg
caggacaaacgcagcgagcacgtccgattctgccgctacgccgtggagatgacggagcga
gtgtcggggaagccgctcctcatgggcaccgacgtctcgctggctcgtctgcagagggcc
aacgtggtcgcccagtcacgcatcaccttctccgagaaggaactcctagtgctgatcagg
aaccacctcgtggccaaaggtctcgtcgacacggcgtgcgcgctcgtcaaggaagcaaat
ctaggatcctactgcccgatctcctcctgcgtcacccctaccccctcctcggtgattccc
aggacttgccggctggctggtgggattgcagcccgtgccgccagccacatcggatcctcc
ccggtgtcctctctacccgcgctctcctccacctctcctcctcttccttctccctgtcgc
gccctcgtcacccctcaccccccgtgctcttcctcgtcttccactgccctccccactcct
cagggctcacatcccgtcggacgtattctgttcacacgggaacgtcccgtggccaattgc
aactcagggaagaagcttcgcgctctcaagcagaagtctgaccacggtgctttcatacag
actccagccatgaagaagacgctggagcgccacctcccgtcgccgccgaccctcgacagc
atcatcaccgagtacctgagggagcagcacgcccgctgccccaaccccgtcaccacctgc
ccccccttctccctcttcacgccgcacaggtgccccgagcccaagcaaaggcgacaggcg
ttgcccaacttcacagcccgcctggggagcagggtgctgtaccagaaataccgaggtgtg
gacagagggtgcctggatcgacatctgatattcagcaggtttcgcccgatgtcagtgttc
cacgagggcgacagcgacgagagcggtttcacgtgctgtgccttctctgcccgcgagcgc
ttcctgatgctgggaacctgctccggtcacctcaagttctacaacatcgcctctggagag
gaggaggccaactacacctgccacacgtcggctatcacacatctcgaaccctccagggat
gggaaattcgtgcttacctctgcttcttggagcgtccccttgtccgccctctggagtatg
gacggtgtctttagcttgaaaaactccttcgtagatgaccactatgtggaattcagtaaa
ctctctcaggaccgagtcatcggcaccaaggaccaagtcgcgcacatctacgacatccag
acgggccagaagacgctgaccctgaacgaccccgccctggccaacaactacaagaggaac
tgcgccaccttcaaccccaccgatgacctggtgctgaacgacggtgtgctgtgggacgtg
cgggcgtcgcgcgccgtccacaagttcgacaagttcaacatgaacatcagcggcgtcttc
catcccaacggcctggaggtcatcgtcaacacagagatctgggacctgaagaccttccac
ctcctgcacactgtcccggccctggaccagtgccggttggtcttcaacagcaacgccacc
atcatgtacggagcaatgcttcaagccgatgatgaggacgacgcgatggaccagcagatg
aagagtcccttcggctcgtccttcagaaccttcgatgctacagactacaagcccattgcc
acggtggatgtaaagaggaacatctttgacctgtgcactgacgaaaaagactgttatctg
gctgtcatcgagaaccaggacacagtgagtctggacacggtgtgtcgtctttacgaggtt
ggacgacagaaactggccgaggagggagacgacgacgacgaccaggacgatgacgacgac
caggacgaagacgacgactcttcggacacagacgacgacgacgacgacgatatggacacg
gacccgctcatagacgagctggccaaccgagaaaacggggaaagggtcgactcgcccacg
gaggaagagatcgccgatcttcttggcggcgacagcagcgacgacaacaacaacgatgac
tcggaggacgactccgacgcgtcacacagaagcggtgatgggtcggatccatttgaccac
gacagcgcagattcagacgatgaacaacgagtagatgacgacattcgtctcttgcgatcg
atacacaggtggttctcctga
DBGET
integrated database retrieval system
