Scophthalmus maximus (turbot): 118308930
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Entry
118308930 CDS
T09850
Name
(RefSeq) E3 ubiquitin-protein ligase DTX3L-like isoform X1
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
118308930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
smau04121
]
118308930
Enzymes [BR:
smau01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118308930
Ubiquitin system [BR:
smau04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
118308930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
zf-C3HC4
KH_DTX3L
zf-RING_UBOX
zf-C3HC4_2
zf-RING_2
zf-C3HC4_3
zf-RING_5
zf-RING_10
Baculo_IE-1
zf-C3HC4_4
HTH_71
zf-RING_4
RING_XB3-XBAT31
SPACA7
Motif
Other DBs
NCBI-GeneID:
118308930
NCBI-ProteinID:
XP_035486291
LinkDB
All DBs
Position
6:14942121..14947938
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AA seq
644 aa
AA seq
DB search
MSGDDTYDEPMDTEASNLDLIDFEQPLALPGQPAQALVTLSPNEEEAQVSLIVEWTGDIQ
PQKYRKDLTKALQSRANKNEFCEEFTVLEASEDAALIKLKPASALKNLIGQTLSCKDGKT
VKLVSVRPPETHRPHDASTNPPSYKSMLQHDQVQQGEQSRFSSSVTDPAAGQACNVPIAH
YWYVSHIYKEEIDRIQKENGVKIVAEVTVKLEPHQKNGDPTKALSEFVTLVQTSLAESNG
FVVPLNYLAPDNVRDTLKILRKNDNKLLLTLSSDEMTVCGPSQSQDAICKSLHTVTQKTL
TDAKTSVGESTWASHDTSVAIGMRIRDILVDAGLTMEESNWMKMNTTFSELVTEIEAKFD
VEFKASGVRRGKVDVKACSKRDGGSASMVSHAVRALLRLYQVMMTSPMSFIKRHAVGGLS
SSPKNKDFQSEGASGGPVLNGKSNTEKHTGAAAAAAGDKEDINCPICMDTVVNKKQLKCK
HEFCEECLQKSKKSIGPTCPVCKDVFGVMEGDQPHGKMSWRTSPLHLQGFNKHCGSIVIE
YNIPSGMQTEQHPKPGQWYSGINRTAYLPDNKEGREVLQLLKKAFDQKLIFTVGTSRTTG
MENQVTWNDIHHKTSSSGGPENFGYPDHGYLSRVREELKAKGVQ
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgtccggtgacgacacgtacgacgagcccatggacaccgaggcctcgaacttagacttg
atcgactttgagcaacctctagcacttcctggtcagcctgctcaggctctggtgacctta
tcacctaatgaagaagaagctcaagtctccctcattgtcgagtggacgggggacattcaa
ccacagaaatatagaaaggacctgacaaaagctcttcaaagtcgtgccaacaagaatgag
ttttgtgaagagttcacagttctggaagcctcagaggatgctgctttgataaagctcaaa
cctgcttcagccctgaaaaacctgattggacaaacactcagctgcaaagatgggaaaaca
gtcaaactagtgtctgtgagaccaccagagacacacagaccacatgatgcctcaacgaac
cccccttcatacaagtcaatgctccaacatgaccaagtgcaacagggggaacaaagtcga
ttcagcagttcagtcacagatcctgctgctggacaggcatgcaatgtgccaattgcccat
tactggtatgtgagccacatctacaaggaggaaattgatcgtatacaaaaagagaatgga
gttaaaattgtggcagaagtgacagtaaaactcgagccacaccagaaaaatggagaccca
accaaagctctctccgagtttgtaaccctcgtccagacatccttggctgaatccaatggc
tttgtggttcctctcaattatttggctccagacaatgtgagggacacactgaaaatccta
cggaaaaacgacaacaagcttttgctgaccctctcctctgacgaaatgacggtatgtggg
ccaagccaaagtcaagatgccatctgcaagtccttacatactgtgacgcaaaaaactcta
acagatgccaaaacttctgttggggagtctacatgggcgtctcacgacacatcagtggcg
atcgggatgagaatcagggacattctcgtggatgcggggctaaccatggaggagagcaac
tggatgaagatgaacaccaccttcagtgagctagtaactgagatcgaagcgaagtttgat
gtggaatttaaagcatcgggcgtcaggcgaggaaaagtggatgtcaaagcttgctccaaa
agagatggagggagcgcatcaatggtgagccatgctgtcagagcccttcttcgtctgtac
caggtgatgatgacgtcacccatgagtttcatcaaacgccacgccgtcggcgggttaagc
agctcaccgaagaacaaagattttcagtcggagggggcttccggtggtcctgtgttgaac
ggcaagtccaacaccgagaaacacacaggagcggcagcagcagcggcaggagacaaagaa
gacataaactgccctatatgcatggatacagttgtcaataagaaacagcttaagtgtaaa
catgaattttgtgaggaatgcctgcaaaaatcaaagaagagcattggtcccacctgccct
gtgtgcaaagatgtctttggtgtgatggaaggagaccagccacatggaaaaatgtcatgg
aggacaagtcccttacacctccagggattcaacaaacactgtggcagtattgtaattgaa
tataatattccaagtgggatgcagacggaacaacatcccaaacctggacaatggtactct
ggtattaacagaacagcatatctgccagacaacaaagagggcagagaagtgctgcaactg
ttgaaaaaagcgtttgaccagaagctcattttcacagttgggacgtccagaacgactggg
atggagaaccaggtgacctggaatgacattcaccacaaaacctcctcttcaggaggacct
gagaatttcggctaccctgaccatggttacctgagcagagtgcgagaggagctgaaggcg
aaaggcgtccagtga
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