Scophthalmus maximus (turbot): 118308962
Help
Entry
118308962 CDS
T09850
Symbol
cacna2d2a
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-2a isoform X1
KO
K04859
voltage-dependent calcium channel alpha-2/delta-2
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau04010
MAPK signaling pathway
smau04260
Cardiac muscle contraction
smau04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
118308962 (cacna2d2a)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
118308962 (cacna2d2a)
04261 Adrenergic signaling in cardiomyocytes
118308962 (cacna2d2a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
smau04040
]
118308962 (cacna2d2a)
Ion channels [BR:
smau04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
118308962 (cacna2d2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VGCC_alpha2
VWA_N
VWA
VWA_3
VWA_2
dCache_1
Cache_3-Cache_2
vWA-TerF-like
MCP-like_PDC_1
dCache_2
Motif
Other DBs
NCBI-GeneID:
118308962
NCBI-ProteinID:
XP_035486374
LinkDB
All DBs
Position
6:11176603..11326151
Genome browser
AA seq
1120 aa
AA seq
DB search
MDGWKSADNNSRLLRLGKQCWIYHHGHVVQSLRLHRSPAWNGASVSFASNKPMIHWAGRI
EKELEKVLQHVTGTQQMRSIYNEKKSQFEIKRNNPKDLVERVARDISKLLNSKRKALEKL
AREAEQLQKEHVWQDGVTENAISYYDSKADSDYAEDGEEESLLESSSPVELEFVDDPNFK
NKVNYSSSAVQIPTDIYKGSPVILNELNWTQALERVFIENRRDDSSLRWQVFGSATGVTR
YYPATPWRAPNKIDLYDVRRRPWYIQGASSPKDMVIIVDVSGSVSGLTLKLMKTSVVEML
DTLSDDDYVNVARFNEKADAVVPCFRTLVQANVRNKKIFKEAVMHMQAKGTTDYKSGFTF
AFEQLLNESSAPRATCNKMIMMFTDGGEDRAQEIFEKYNWPNKTVRVFTFSVGQHNYDVT
PLQWIACANKGYYFEIPSIGAIRINTQEYLDVLGRPMVLAGPRAKQVQWTNVYQDALGLG
LVITGTMPVFNLTADTVSSQNQLILGVMGVDIAINEIKKKTPTYRLGANGYTYAIDPNGY
VLLHPNLRPKIFNFREPVTLDFLDAELEDSNKEEIRRQMIDGKSGQRKIKTLIKSVDERY
IDEAMRTYTWTPVDGTDYSLGLVLPTYSENHIKANLSDQILQVQYFESLLPNSFESEGHV
FIAPREYCNDLELSNNNTEFLLNFIALMEKVTPDSKQCDNLLLHNLILDTGIIRQLVDKV
WKNKDLNTYGFLAVFAATDGGVTRVFPNKASETWEEDPEPFNASYYRRSLDNKGYIFRAP
YRTARDELLNPENDTIGILVSTAVEITIGGKNIKPAVVGVKLDLEAWTDKFKILASNHTD
NRQGSNTCGPNRGCEMDCEANSDDLLCYLVDDGGFLIMSNQKDDWNKVGMFFSDVDPTLM
YALYNNSFYKRKQSFDYQSVCERMPNSESGAAPRGVFVPTIADFVNVAWWTSAAAWSVFQ
QFIYGLAYHSWFVTDEVDADGIDFKERGCVMIQTQYYLSNLSSSYNILQDCVNCSRLIHA
KRINNTNLLFVVAEKLPCNTCEIEKLSQEEEEFKEENPCEELTVARYRKGPSTCFDYNIA
ENTSDCGRGHAFRPSLYTLLLIQLLLLYPAISPHVHLLLQ
NT seq
3363 nt
NT seq
+upstream
nt +downstream
nt
atggacggctggaagtccgctgacaataacagtcgccttttacgtcttggaaaacaatgt
tggatttatcatcatggacatgtcgtacaaagtctccgattgcacagaagccctgcctgg
aacggagcaagtgttagcttcgcgtcaaacaaaccaatgattcactgggccggacgcatc
gagaaggagctggagaaggttctgcaacacgtcaccggaactcagcagatgagatcgatt
tacaatgagaagaagagccagtttgaaatcaagagaaacaaccccaaggacctggtggaa
cgagtggcacgggacatctccaagctgctcaacagtaagaggaaagccctggagaaactg
gccagggaggcagagcagcttcagaaggagcacgtatggcaagacggtgtgacggagaat
gccatttcatactacgattccaaagcggattcagactatgcggaggatggggaagaggag
agcctgctggagagctcgtctcccgtggagctggagtttgtggacgatcccaactttaaa
aacaaggtcaactactcctccagtgccgtccagattcccacggacatttacaaaggctcc
ccggtcatccttaatgagttaaactggacgcaggctctggagcgggtcttcatcgaaaac
cgccgggatgacagctcgctgcgctggcaggtgttcggcagcgccactggagtgacacgc
tactacccagccactccctggagggcgcccaacaagatcgacctgtacgacgtccgcaga
agaccgtggtatatccagggtgcatcgtctccaaaggacatggtcatcattgtggatgtg
agcggaagcgtcagcggactgactctgaagctcatgaaaacctccgtggtggagatgctg
gacaccctatcggacgatgactatgtgaatgtggccaggttcaacgagaaggccgatgct
gtcgttccttgcttcaggactttggtccaagccaacgttcgtaacaagaagatcttcaag
gaggccgtcatgcacatgcaagccaaaggaaccacagattacaagtctggcttcacattc
gcctttgaacagcttctcaatgagagcagtgccccgagggccacctgcaataaaatgata
atgatgtttacagatggcggggaggatcgtgcacaggaaatctttgagaagtacaactgg
cccaacaaaacggttcgtgtgttcaccttctccgttggccaacataattatgacgtcacc
cctttgcagtggatagcttgtgccaataaaggttactactttgaaatcccatcgatcgga
gccatccgaatcaacacccaggagtacctggacgtcctgggccggcccatggtgctggct
gggccaagagccaagcaggtgcagtggacaaacgtctaccaggatgctctgggtttgggt
cttgtcatcactggaacgatgccagtattcaacctcactgctgatactgtgagctctcag
aaccagctcatcctgggcgttatgggagtcgacatcgccatcaacgaaatcaaaaagaag
actcctacttacagacttggagccaacggttacacgtatgccatcgacccaaatggttat
gtactgctacatcccaacctgcgacccaagatctttaactttagggagcccgtcaccctg
gactttctggatgcagagcttgaagacagcaacaaggaggagatccgacgacagatgatt
gatggcaaatcagggcaaaggaaaatcaagacgctcattaagtcagttgatgagcggtac
atcgatgaggccatgcggacatacacatggaccccggtggacggtacagattacagtcta
ggtttggtactgcccacatacagtgagaaccacatcaaggccaacctgagtgaccagatc
cttcaggtgcagtattttgaatcactgctgccaaacagttttgagtctgaaggacatgtg
ttcattgctcccagggagtactgcaatgatctggaactgtccaacaacaacacggagttc
ctgctcaacttcattgctctcatggagaaggtgacgccggactctaaacaatgtgacaat
ttgctccttcataacctgattctggacacgggcatcatcaggcagctggttgacaaagtg
tggaagaataaagacttgaacacatacgggtttctagccgtgtttgctgcgaccgacgga
ggcgtgacaagagtgtttcctaacaaggcttcggaaacctgggaggaagaccctgagccg
tttaacgccagctattaccgccgcagtcttgacaacaagggctacatcttccgagcgcct
tatcgaacagccagggacgagctgctgaacccagaaaacgacaccatagggatcctggtc
agcacagctgtggagatcaccataggaggaaagaacatcaaacctgcagtggtcggagtg
aaactggaccttgaagcctggacggataagttcaagattcttgccagtaaccatacagac
aaccgccaaggctcaaatacgtgtggaccgaacaggggctgtgaaatggactgcgaagcc
aacagtgatgatctcctgtgttacttggtagacgatggtggattcctgatcatgtccaat
cagaaggacgactggaacaaggtgggaatgttcttcagtgacgtcgaccccacattgatg
tacgccctctacaacaattccttctacaaacgcaagcagtcatttgactaccagtctgtg
tgtgaacggatgcccaacagtgaatctggagctgcacccagaggagtgtttgtgcctaca
attgcagattttgtaaacgtggcttggtggacatcagcagctgcatggtccgtgttccaa
cagttcatatatggcctggcttatcacagttggttcgtcacagatgaggtggatgctgat
ggaatcgatttcaaagagcggggctgtgtaatgatccagacccagtactacttaagtaat
ctcagcagctcctacaacatactgcaagactgtgtcaactgctccaggctgatccatgcc
aagaggataaacaacaccaacttgctgtttgtggtggcagagaagttgccatgcaacacc
tgtgagatagagaagctgtcccaggaggaggaggagtttaaggaggaaaacccgtgtgaa
gaactgactgtggcgcgttatcgaaaaggaccatccacctgcttcgactacaacatcgcc
gagaacacgtcagactgtgggcgaggtcacgctttccgtccgtctctctacactttgctg
cttattcagctgcttctgctgtatccggctatcagcccccacgttcacttgctactacaa
taa
DBGET
integrated database retrieval system
