Scophthalmus maximus (turbot): 118309157
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Entry
118309157 CDS
T09850
Symbol
nfasca
Name
(RefSeq) neurofascin homolog (chicken) a isoform X1
KO
K06757
neurofascin
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
118309157 (nfasca)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
smau04515
]
118309157 (nfasca)
Cell adhesion molecules [BR:
smau04515
]
Immunoglobulin superfamily
L1 family
118309157 (nfasca)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
fn3
Bravo_FIGEY
V-set
Ig_DSCAM-DSCAML_C
C2-set_2
BiPBP_C
DUF3792
MnhB
Motif
Other DBs
NCBI-GeneID:
118309157
NCBI-ProteinID:
XP_035486838
UniProt:
A0A8D3DZW6
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All DBs
Position
6:25224838..25336933
Genome browser
AA seq
1403 aa
AA seq
DB search
MLGQGRHAALALVSLLLSWREATPIEVPRDARIQQELKQPPTLVRQSVKDYIVDPRDNII
IECEAKGNPVPTFSWRKNRKFFNIAKDPRVTMRKGSGTLEIGFRSGGRPEDYEGEYQCFA
KNDLGTALSNKILLRVSKAPLWPKEVLEPVVVTEGSPLVLLCNPPPGLPPPFTFWMTSGM
SPIRQDKRVSMGLNGDMYFSNVIARDADTDYSCNARFPFTHTIQQKNPFTLKVHTKEPYN
DTSYNATDPFGGRKVAESTPTFLSPSGSQSSKMVLRDEHLLLECIAAGLPTPTIKWFKKG
GDLPGHKVKFEKFNKTLKMVSVSEEDDGEYVCMANNHLGSIRHSIFVHVKAAPYWLDKPT
DLVLAPDENGRLVCRANGNPKPEIKWLMNGEPLENPSPNPSRQVLGDTIIFRSVQMGGSA
VYQCNASNEHGYLLANAFVSVLDMPPRMLGAKKQLIKVIENNRTFLDCPFFGSPLPELRW
FKNGQGSGLDGGQYRAYINGTLEIKKARAEDEGTYTCVASSILGMAENQVSLEVKERTRI
VGAPEHKSAIRGSTARFTCKVKSDPSLPVTVTWTKDDKPLYLGWRLKKDEESLTISNVNE
GDEGTYACTVKSEIDQDSASARLTVLEEASLNPSVSSALPPDRPDPPMDLDLSDPAARSV
RLTWIPGNDHRSPITEFLVQFEEDRWEPGRWQNLSTYPGDFNSVILQLAPFVNYQFRVIA
INTVGQSQPSRPSPRYKTSGAAPDAIPRGVRGWGSEKDNMEISWEPLLDLERNGPNLRYS
VWWRRKDAGEEWSNVTTEGSKHVVHNTDTYVPYEVKVQARNEFGPGPESNQVIGYSGEDV
PTDAPTDLRVSKVGSTKANIHWKPVDPASVRGEFKEYKLYYWRESSLVPGLLVSKEKRTK
GVYSTASEPSGILSDLVPYSRYQMFMVVANGRFEGPPSNTVEFTTKEGVPDAPRFFRINR
RSFDSIYLEWDKPLEPNGILIGYQLKYRIVNGSRVGGRTQLETFFPNVTDFTLRLPDRST
RYNFFLSALTQIGAGEVFAEESPPFANQENFTDTTGLVELTDASVASSFTPTPPPLASLP
PTTIAPPTIAPTTATPTTPTTTTTAPTTATPTTPTPTTTASTTATPTTPPPTTTPATEAT
TTAKAAVLVTVRRTDQSVSVAPAWEIWNLTAEHNINYADVSWIHNFPAGSSEFVLEFTLD
SDKTVKVVQVNQQPPIRVADLIAGAKYHLRVYSHAFNSISSKYITFKTKAAYIDQVDIAT
QGWFIGLMCAIALIILILLIVCFIKRSRGGKYPGGGFVAGFAEYLVRDKKDLPLDPVDQK
EDGSFDYHSDEDNKPLQGSQTSLDGNVKESDDSLVDYGEGGDGQFNEDGSFIGQYTVKKD
KDETEGNESSEATSPVNAIYSLA
NT seq
4212 nt
NT seq
+upstream
nt +downstream
nt
atgttggggcagggcaggcatgcagccctggctctcgtgtcgttactcctatcctggcgt
gaagcaacacccatcgaagtcccacgagacgcaaggatccagcaagagctgaagcagccc
cccactctagtcagacagtcggtgaaggactacattgtcgaccccagagataacatcatc
atcgagtgtgaggccaagggcaacccggtgccaacgttctcatggcgaaagaatcggaag
tttttcaacattgcgaaggaccccagggtgaccatgcgaaagggctcgggaaccctggag
atcggtttccgcagcggggggcgaccggaggactacgaaggagagtaccagtgttttgcc
aaaaatgacctaggaaccgctctgtccaacaaaatcctgctgcgggtctccaaggcgcct
ctgtggcccaaggaggtgctggagccggtggtggtgacggaaggctccccgctggttctt
ctctgcaaccccccaccgggcctcccccctccgttcaccttctggatgaccagcggcatg
agcccgatacgtcaggacaagagggtttccatgggcctgaacggagacatgtacttctcc
aacgtcatcgctcgggacgccgacacagactacagctgcaacgctcgcttccccttcaca
cacaccatccagcagaagaaccccttcacgctcaaagttcacaccaaggagccatataat
gacacatcttacaatgccactgacccctttggtggccgcaaagtagccgagtccacgccg
accttcctctcgccgtcgggcagtcagagctccaagatggtgctacgagacgagcacctg
ctgctggagtgtatcgctgctggactaccgacgcccacgatcaagtggtttaagaaggga
ggggacctgccagggcacaaggtgaagtttgagaagttcaacaagaccctgaagatggtc
agtgtgtcggaggaggacgacggggaatatgtgtgcatggccaacaatcatttgggcagc
atacgccactccatctttgtccacgtgaaagcggctccctactggctggacaagcccaca
gacctggtgctggccccagatgagaacgggcgtctggtgtgtcgggccaacgggaacccc
aaaccggaaatcaagtggctgatgaacggagagccgctagaaaacccttcccccaacccg
agccgacaggtgctgggtgacactatcatcttccgctcggtgcagatgggaggcagcgcc
gtctaccaatgcaacgcctccaacgagcatggctatctgttggccaacgccttcgtcagc
gttcttgacatgcctccgagaatgctgggagctaaaaaacagctgattaaagtcattgag
aacaaccgcaccttcctggattgtccattctttggttctcctctgccagaactgcgctgg
tttaagaatggacagggcagcgggctggatggcggtcagtaccgcgcttacatcaacggc
accctggagatcaaaaaggcccgagcagaggacgagggcacctacacctgtgtggccagt
agcatcctgggcatggccgagaaccaagtcagcctggaggtcaaagagcggacgcgtata
gtcggagcccccgagcacaagtcagccatcaggggctccacggctcgtttcacctgtaag
gtgaagtctgaccccagcctgcccgtcaccgtgacctggaccaaggatgacaagccgctc
tatctgggatggaggctgaagaaggacgaggagtcacttaccatttccaacgtgaacgag
ggtgacgaggggacgtacgcctgcaccgtcaaatctgagatagaccaggactcggcctcc
gctcgcctgactgtgttagaggaagcctccctcaacccctcagtctctagtgccttgcct
ccagaccgcccagaccctcccatggatctggatctgtcggacccagcggcccgcagtgtt
cgcctcacctggatccctggaaacgaccacaggagccccatcacagagttcttggtccag
tttgaggaggaccgctgggagccaggcaggtggcagaacctgtccacttaccccggggac
ttcaactctgtcatcctgcagctcgccccctttgtcaactaccagttcagggtcatcgcc
atcaacacagtgggccagagtcagcccagccgcccctcaccacgatacaagaccagcgga
gctgccccggatgccattcccagaggcgtccgaggatggggctccgagaaggacaacatg
gagatcagttgggagcctctgctcgacctggagagaaacggcccaaacctgcgctacagt
gtgtggtggagacggaaggacgcgggggaggagtggagcaatgtgaccacggaggggtcc
aaacatgtggtccacaacacggacacctacgtgccttacgaggtcaaagtccaggcccga
aatgagtttggaccaggacccgagtctaatcaggtcattgggtactccggagaggacgtg
cccaccgacgctccgactgacttgcgggtgtcaaaggtcggcagcaccaaagcgaacatc
cactggaagcccgtggacccagcctctgtccggggagagttcaaagagtacaaactctat
tactggcgtgagtccagtctggtcccgggtctgctggtcagcaaggagaagaggaccaaa
ggggtctacagcaccgcatccgagccgtctggcatcctcagtgacctggtgccctactcg
cgctaccagatgttcatggtcgtggccaacggccgctttgagggcccgcccagcaacacc
gtggaattcaccaccaaagagggagttcctgacgctccgaggttcttcaggatcaaccgc
aggagtttcgactccatctacttggagtgggacaaacctctggagcccaacggcattctg
attggataccagctcaaatatcgtatagtcaatggttccagggtggggggccgaacgcag
ctggagactttctttcccaacgtgacggacttcacccttcgcctgccggacaggtcgacc
cgctacaacttcttcctgtcagcgctcacacagattggggcaggggaggtctttgccgag
gagtccccacctttcgccaaccaggaaaactttactgataccacaggtctagtcgagctt
accgatgcctctgtggcctcatctttcactcctactcctcctcctcttgcttctcttcct
cctaccaccattgctcctccaaccatcgctcctacgactgcaactcctaccactcctact
actactactactgctcctacgactgcaactcctactactcctactcctactactactgct
tctactactgctactcctactactcctcctcctaccaccacccctgcaactgaggcgacc
accaccgccaaagctgctgtgctggtcaccgtcaggcgtaccgatcagagcgtgtcggtg
gcccctgcgtgggagatctggaatctgacggcggagcataacattaactacgctgacgtc
agctggatacacaacttcccggccggcagcagcgagtttgtgctagagttcacactggac
agcgacaagacggtgaaagttgtccaggtgaatcagcagccccccattagagtggcggat
ctgatcgcaggcgccaagtaccacctgagggtttactcccatgcgttcaacagcatcagc
agcaaatatatcacctttaagaccaaagcagcctacatagaccaggtggacatcgccact
cagggctggttcatcggcctgatgtgcgccatcgccctcatcatcctgatcctcctcatc
gtctgcttcatcaagaggagccgtgggggcaaatacccaggtggcggctttgtggctggt
ttcgcagaatatcttgtgcgagacaaaaaggaccttcccttggacccagtggatcagaaa
gaagacggatcgtttgattaccacagcgacgaggacaacaagcccctgcagggcagccag
acgtcgctggacggcaacgtgaaggagagcgatgacagcttggtggactacggcgagggc
ggcgacggccagttcaacgaggacggctctttcatcggccagtacacggtgaagaaggac
aaggacgagacggagggcaacgagagctccgaggccacttcgcccgtcaatgccatctac
tcgctggcgtag
DBGET
integrated database retrieval system
