Scophthalmus maximus (turbot): 118309235
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Entry
118309235 CDS
T09850
Symbol
tmf1
Name
(RefSeq) TATA element modulatory factor
KO
K20286
TATA element modulatory factor
Organism
smau
Scophthalmus maximus (turbot)
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smau04131
]
118309235 (tmf1)
Membrane trafficking [BR:
smau04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
118309235 (tmf1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TMF_TATA_bd
TMF_DNA_bd
ATG16
Motif
Other DBs
NCBI-GeneID:
118309235
NCBI-ProteinID:
XP_035487006
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All DBs
Position
6:complement(19778230..19791202)
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AA seq
1156 aa
AA seq
DB search
MSWFNASHLSSFAKQALTSAQKSIDRVLDIQEGDQWGDATVMPYDDVTLPGKLSLSGGWG
MTQWEAPPEEKTTTPPPSSEAITTPVTRTVVDESENFFSAFLPPVDGQGVTQSQVVSVAP
AKSQRRPQEKDERKTEASTKRDVETQISVPADESHENQSVAESKPVESESLPEAPYADTI
LLQPVSPVSSSSDLPCSTDSNTGSETTSVGSADSLDPKPEPAQTPLEHEVEQDTTDSSEP
SAVTSELKSSSPPEPSPPSSPKEVLLEHKDSKAEDRQNDTPSPPVSAFSSGTSTTSDIEV
LDHESVLSESSASSRQETGEGKAGLHLMQGSFQLLTASTCGDFSRLEDYPKLTESCGSSS
DAFERIDSFSVQSLDSRSVSEVNSDDETPGSRTLASVTAGPAPLTVSSAMCQKQEDGVAE
TVGEDGDEEGFTETMREQSLDEMEESGRSATPVNSEQPEELAEQECEANVTLSDLPSNTE
NPITPPITAEMKSVSTVQILEFQKVIDELSGRLEKRESQLLAVSKDKAKLEEECDNLKDE
VISLKEESSTVQSLKEEFTQRIADTERKAQLACKERDIAKKEIKGLREELSTRLNSSDTL
EIIREKEEQIRGLLEEGEKLSKQQLQHSNIIKKLRVKERESDTKITRHQKKIKEQEEELR
QLQQILDGKEELEKQHRENIKKLNGVVERQEKELSRLQSDSDELQEKNRSLQAALDSAYK
ELAELHKANASRASVAEEAALSRDTHAKEQLGLALEKAQEEARMQQEALANQVADLRMAL
QRAEQQQARKEDYLREEISELQQRLQEAETRNQELSQSVTSATRPLLRQIENLQASLCGQ
TTSWEKLEKSISDRLADAQTQLAVAVEKERSATEELLSIKSQLVSLESQNSLLRQEKARF
LAQLDAEKHKREKLEDESSRERVDFENLRGEHSRMQEEAKKEKLLLTNQLEMEKIKVEQE
KKKCYLAQEALKEKERKVMTYSVGEAPASSTPSLSRSSSISGPDNAGLHTSMLFQDDSSD
HSLGAMTMSLSMSATNLYEAARLSGGSSIIENLQSQLKLREGEIAQLQLEISSLERSRSV
MAEELVRLTNQNEEMEDKVNEIPMLKDQLKDLEQRHNTILQMYGEKAEEAEELRLDLEDV
KNMYKAQIDELLQNQK
NT seq
3471 nt
NT seq
+upstream
nt +downstream
nt
atgagttggttcaacgcgtctcacctgtccagcttcgccaaacaagcattgacgtcagct
cagaagtcgatcgatcgtgtgctggacatccaggaaggggaccaatggggtgacgcaact
gtaatgccttacgatgatgttacgttgcctggaaagctgtccttgagtggaggatggggg
atgactcagtgggaagcgccccctgaggaaaagaccaccactccccctccctcgtctgag
gccatcactacgcccgtcacccgcaccgtcgtggatgaatcggagaactttttcagtgcc
tttctgccacccgtagatggacaaggcgtcacccaaagccaggtggtgtcggttgcccct
gctaagtcccagcggcggcctcaggagaaggacgagcgaaagacagaggcttcgaccaag
agagacgtggagactcagatatcagtgcccgctgatgagagtcatgagaatcaatcggtt
gccgagagcaagccggtggagtccgagtccttaccagaagcaccttatgcagacactatc
ctcctacagccagtttctcccgtttcttcttccagcgatcttccttgtagcactgacagc
aacacgggcagtgaaactacaagtgttggctcagcagattctttagatcctaaacctgag
cccgcacagactccattagaacacgaggttgagcaggatacgactgactcctccgaaccc
tctgccgtcacttctgaactgaagagctcttcgccccctgaaccttcgcccccgtcatct
cccaaggaagttctcctcgagcataaagactcaaaggcagaggaccgtcaaaatgatacc
ccctcccctccagtaagtgctttctcctcaggaacctctaccaccagtgacattgaagtg
ctcgaccatgagagtgtgttgagtgagagctccgccagctccagacaagaaacgggtgag
ggtaaggctggcctccacctgatgcagggctctttccagcttctcactgcctccacctgt
ggagatttctcccgactggaggactaccccaaactcacggagagctgcggttcgtcctcg
gatgcatttgaacgcatcgactcattcagcgtgcagtcgctggacagccggagtgtcagt
gaggttaactcggacgacgagacacccggcagtcggacactagcgtctgtcactgcaggt
cctgctcctctgacagtgtcatcagccatgtgccagaagcaggaagatggcgtggcggag
acggtgggagaggacggagacgaggaggggttcactgaaacgatgagggagcagtcgctg
gacgagatggaggagagtggacggagtgcaacgcctgtgaatagtgagcagcctgaagag
ttggcagagcaggaatgtgaggctaatgtcacgctgtctgatctcccctccaacactgag
aacccgatcacaccaccaatcacagcggagatgaaaagtgtctcgacagttcagatattg
gagtttcaaaaggtcattgatgagctctcgggccgccttgagaagagagagtctcagctg
ctggcagtcagcaaagacaaagccaagctggaggaggagtgtgacaatctcaaagatgaa
gtgataagtctcaaggaggaaagctccactgtgcagtccctgaaggaggagttcacccag
cgcatagcagacaccgagaggaaggctcagctggcctgcaaagagagagatatagccaag
aaggagataaagggcttgcgagaagagctttctacgaggctgaactcaagtgatacattg
gagatcatcagagagaaggaggaacagatcagaggtctgctggaagagggtgaaaagttg
tccaagcagcagctgcagcacagcaacatcatcaagaagctgcgtgtgaaggagagggag
agcgacacgaagatcaccaggcaccagaagaagatcaaggagcaggaggaagagctcagg
cagctccagcagattctagatgggaaggaggagctggagaaacagcacagggaaaacatc
aagaagctgaacggtgtggtggagcggcaggagaaggagctgagccggctgcagtcggac
tctgacgagctgcaggagaaaaacagaagcctacaggccgctctggacagcgcttataag
gagcttgcagaactccacaaggcgaacgccagcagagccagcgtggctgaagaagcagcg
ctgagcagggacacgcatgcaaaggagcaactaggcctggctctcgagaaagctcaggag
gaggccaggatgcaacaggaggccctggccaaccaggtggctgacctgagaatggctctg
cagagggctgagcagcagcaggcaaggaaagaagattatttgagggaggagatcagtgag
cttcaacagaggcttcaggaggccgagactaggaaccaggagctcagtcagagtgtcacc
tcggcaacacggccccttctgcgacagattgagaatttacaggcctcattgtgtggacag
accacatcgtgggaaaaattggagaagagcatttctgataggcttgctgacgctcagaca
cagctggctgttgccgtggagaaggagcgctcagcaacggaggaactgctgtccatcaag
tcccagctggtctcgctggagtcccagaattccttgctccgccaggagaaagcccgcttc
ctggcacagctggacgctgagaagcacaagagagagaaactggaggatgagagcagcagg
gagcgtgttgactttgaaaatctgcggggggaacacagtcgaatgcaagaagaggccaag
aaggaaaagctgctgctgaccaatcagctcgaaatggagaagataaaggtggagcaagag
aagaagaaatgctacttggcacaagaggcactcaaggaaaaggagcggaaggttatgacc
tactctgtcggagaggcccctgcatcttccacaccctccctgtcgcgctccagctccatc
agtgggccggacaatgccggtctacacacctctatgcttttccaggatgactcatcagac
cactcactaggcgccatgaccatgtccttgtcgatgagcgcaaccaacctgtacgaggct
gcaaggctgtctggaggctccagcatcatagagaacctccagtctcagctcaaactgaga
gaaggagagatcgctcagctgcagctcgaaatctctagtctggagaggagtcgctctgtg
atggcagaagagctggttcgactcaccaatcaaaacgaagagatggaggacaaggtgaat
gagatccccatgctgaaagatcaactcaaggatctggagcagaggcacaacaccatcctg
cagatgtatggagaaaaggcggaggaggcggaggagctgaggctggaccttgaagatgta
aagaacatgtacaaggcccagattgatgaactgctgcagaaccagaaataa
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integrated database retrieval system
