Scophthalmus maximus (turbot): 118309307
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Entry
118309307 CDS
T09850
Symbol
ap5b1
Name
(RefSeq) AP-5 complex subunit beta-1
KO
K19022
AP-5 complex subunit beta-1
Organism
smau
Scophthalmus maximus (turbot)
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smau03400
]
118309307 (ap5b1)
DNA repair and recombination proteins [BR:
smau03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
118309307 (ap5b1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
AP5B1_middle
AP5B1_C
AP5B1_barrel
AP5B1_N
DUF190
Motif
Other DBs
NCBI-GeneID:
118309307
NCBI-ProteinID:
XP_035487158
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All DBs
Position
6:complement(26025521..26031316)
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AA seq
953 aa
AA seq
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MAVNWADRVSAFSRSPSRFLSGTTAEAFLAELLRELRDDRASDSVKVLLVSPLCEHPTLL
CPSDSEGEETALELMSVFAQCPAKSVQLRCHLLLALASVLVCSSCVSVRSPASRDFLDLL
LQVSQDTGDLHGDGALLSLRATACDCLRELEACSPGLLSQHLELFGGLRQRESSRFHQAY
AGLHSLVLRNAVYQLTQETGAGAEQLKALLGGNTSVAWEADQDSGPTNNTDSTVLSSLIL
GPMGTVPSLQTGPDCKELRSILSSLLEESYLLTPLCQAALLHRLTEVVAMVPGVPPAIFR
AQLLRLLGTSKVCLLHTTLLMKCAFTDSLFSAEDEAFIVKRLVALSQHPLLTDPEKLFYM
DCILHFPENRPIGCGDGDETLPVLLTPRLAAALLPTVFNDSATMLARLNLLSLVYLEEGE
EGEGGEGRGLAYLYEHLMSLLRIVESGGSRETVVAFFRASFLFLWHFYHMECYTSSLVEK
LCELYLRHSQLAPHLIGLADHTQDRLCESNWAEGLLKALQRVITDVPLAQLTSQDLRSHL
KTLARVAEEGKIAQRSTLHFLSSIIAPSSSLCVSGDWRLGNSVLAVCRRLLVHPSLDSLL
VPLADILQHLACRYGDTDVQDHARLYYALLTTLSQEKLAGVLAQGATEGGRQVKKRSLSS
IVADSEGLTSMLTIHQTERAIFSVVEMNPELRRDTQADKESDLNQSEAGECPDEASAALE
AYRSQFDDPDFASEITLSYQLAHAQDPDPRFDQLFSIRLHFSLTDDHYEALSDISVPCLF
RERPPPAVQLRLKPRRPHPTTLRASAIFTTQDGLSWHTVLPAIRVAFQQAFMPLPAPPAW
RRGGKLNLFEGLWDELCSESGECAASLFCCQLKEAALIGLVEKHFLPYLISDWSRKEEFK
VLFFLPPQSHVLLKIRSEEDAVHFDVATDNWQLLSHISSYLLTITSSQEDTHS
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgaactgggccgacagggtctccgccttctcccgcagtccgtctcgcttcctc
tcggggacaacggccgaggcgttcctggcggagctgctccgcgagctgcgagacgacaga
gccagtgacagtgtcaaggtcctcctggtgtccccgctatgcgagcacccgactctgctg
tgcccctcagactctgagggtgaggagacggccctggagctcatgtcggtgttcgcccag
tgcccggccaaatctgtgcagctccgttgtcacctcctcctggcccttgcctccgtgctc
gtgtgctcctcctgcgtcagcgtccgttccccggcatctcgagatttcctggacctgctc
cttcaggtgtcccaggacaccggggacctccacggtgacggtgcccttctttctctccgg
gccacagcttgtgactgtttgcgggagctggaagcctgctctcccggtctcctctcccag
cacctcgagctctttggcgggctcaggcagcgagaatcctccaggttccaccaggcctac
gcgggacttcacagcctggtgctgaggaatgctgtgtatcagctcacccaggaaacggga
gctggtgccgagcaacttaaagctcttctgggggggaatacatcagttgcatgggaagcg
gaccaggactcaggcccgacaaataacacagactcgaccgtattgtcttctctcatcctg
gggcccatgggcacggtgccgtcccttcagacggggcccgactgtaaggagctgcgttca
attctgtcctccctcctggaggagtcctacctgctcacccctctgtgtcaggctgcactg
ctgcatagactgacggaggtggttgccatggtgcctggtgtccctcctgccatattcaga
gctcagctgctgcggttgctgggcacaagcaaggtctgtctcctccacaccactctgctg
atgaagtgtgcgttcacagacagcctgttcagcgccgaagacgaggcgttcatcgtcaag
cggctggtcgcactctcccagcacccactgctgactgaccccgagaagctgttctacatg
gactgcatcctgcactttccggagaaccgtccgatcggctgcggcgacggggacgagacg
ctccccgtgctgctcaccccccggctggccgcggctctcctgcccaccgtgttcaatgac
agcgccaccatgctggcccggctcaacctgctgtctctggtctacctggaggagggggag
gaaggggaggggggtgagggcagggggctggcctacctctacgaacacctaatgtcgctg
ctgcgcatcgtggagagcggaggcagcagagagacggtcgtcgccttcttcagggcttcc
ttcctcttcctttggcacttctaccacatggagtgctacacgagcagcctggtggagaag
ctgtgcgagctctacctccgccacagccagctggcgccgcacctcatcggcctcgccgac
cacacccaggacaggctgtgcgagtccaactgggctgaggggctcctgaaagccctgcag
agagtcatcaccgacgtcccactcgcccagctcacctcgcaagacctccgctcgcacctc
aagacgctggcacgagtggcggaggaaggaaaaatcgcccagcgcagcaccctccacttt
ctgtccagcatcatcgctccatcctcctcgctgtgcgtgagcggcgactggcgtctgggg
aactccgtgttggcggtttgccgtcgtttactcgttcatcccagcctggactcgctgctc
gtccctctggccgacatcctgcagcatctcgcctgccgctacggcgacaccgacgtccag
gaccacgcccgtctttactacgccctcctcacaacgctgtcccaggagaagctggccggg
gtgttggcgcagggcgcaacggagggagggcggcaggtcaagaagcgatccctgtcgagc
atcgtggctgacagcgaggggctgacgagcatgctgaccattcaccagacggagagggcg
atattcagcgtggtcgagatgaatcctgagttacgacgagacacgcaagcagacaaagaa
agcgacctgaaccagagcgaggcaggcgaatgcccagatgaggcgagcgctgcactggaa
gcctacagaagtcagtttgacgaccctgactttgcctctgaaatcaccttgagctaccaa
ctggcccacgctcaggatccagacccgcgcttcgaccagctcttcagtattcgcctgcac
ttcagcctcaccgacgaccactacgaggcactgagtgacatcagcgtcccgtgcctcttc
agagagaggccgccgccagcggtgcagctgaggctaaagcccagacggccccacccgacc
accctccgagccagcgccatttttaccacccaagatgggctctcctggcacaccgtcctt
cctgccatccgtgtggccttccagcaggccttcatgcccctgcccgctcccccggcctgg
aggagaggcggcaaactgaacctgttcgagggattgtgggatgaattgtgctcggagagt
ggggaatgcgctgccagcctgttctgctgccagctgaaggaggcggccctgatcggcttg
gtggagaagcacttcctcccctacctcatttcagactggtcccgcaaagaagagttcaaa
gtgctcttcttcctcccgccacagtctcacgtgctgctgaaaatccggtcggaggaagac
gccgtgcacttcgacgtcgccacagacaactggcagcttttgtcgcacataagctcgtat
ctactgacaatcacatcctcgcaggaagacacgcacagctga
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