Scophthalmus maximus (turbot): 118309374
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Entry
118309374 CDS
T09850
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like isoform X2
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
118309374
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smau03021
]
118309374
03036 Chromosome and associated proteins [BR:
smau03036
]
118309374
Transcription machinery [BR:
smau03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
118309374
Coactivators
SAGA/TFTC/STAGA complex
118309374
Chromosome and associated proteins [BR:
smau03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
118309374
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
17kDa_Anti_2
Motif
Other DBs
NCBI-GeneID:
118309374
NCBI-ProteinID:
XP_035487312
LinkDB
All DBs
Position
6:20276270..20285157
Genome browser
AA seq
834 aa
AA seq
DB search
MEASAAGTDSTTGRGPGKTLVEVGGATSLPNHQGRVGSYSSQTFNGSQTMNCHNSGSAAP
HGGSVTSGTGGGAPAVSPAAVHGGPVLSKGLYGAIVPAASNSVIQTPLVNSQSVVVQALP
VSPATGATGATGATVTLARPPAQAAGSGATLNGNNVAAQSGVGAHTPLVNDAQPPTSLSV
SARLHTIKAEPPATISQSAPQPAVTPASVGAPRAPAPAAVGPVGIRAPTPQMLVPWLPPT
SARPPGIHNIQLPPGMVLVRSESGQLLVIPQQALAQMQAQAQGGTAPRTATPTNVPPGPS
PGNISRQVAPSTIIRQGCPAPTSLAATTTLHRPPILQRSVGAAVPGMTPRTGSHTAGTTV
TSVKETMENVKKCKNFLSTLIKLASTVSQSTETAATVRELVKELLEGKVEAEEFTSRLYK
ELNSQPQPYLVPFLKRSLPALRQLTPDSAAFIQQSQLPKPGSQRVSSISPTPTTVVLGNP
TPRLTAPISRPQLQPGVSKPGQTPSLLQQQRAMLRPQVTVPSTPMVTLRNQAPGRIMLGQ
QQVQHKELQPVPVRPELLPVSRQVSAAALTPAQRNKLKEAGGTFKDDDDINDVASMAGVN
LSEENANILATNSGLVGAVTHSCKDEAFLSCAMLQRRMLEIGRSYGVTDLGAEVVNYVSH
ATQHRLQNLLEKVSQVAQQKNVNLKEDDNNEQGSDVRAQLKFFEQLDLLEKQRKEEQERE
ILLKAAKSRARQEDPEQLRLKQKAKEMQQQELAQMRQREANLTALAAIGPRKKRKNLDSP
SSSAAAEGSGTGPLSGSRPTRQRITRVNLRDLLFCLEEERFTSRPHFLYKGFLK
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atggaagcatcggcagccggcacggactccaccacgggacgcggccctggcaaaacactt
gttgaggttggcggtgcgacttctctccccaatcaccaggggagagtaggctcatactcg
tcgcagactttcaatgggagccaaactatgaactgtcacaattcaggaagcgctgcccct
cacggggggtcggtgacaagtggcactggcggcggcgctcccgccgtgtctcctgcagct
gtccacggtggaccagtgttgtccaaagggctgtacggtgcgatcgtgcccgccgcgtca
aacagtgtcattcagacgcccctcgtgaactcgcagagtgttgtcgtccaggctctgccc
gtgagcccggccacaggggccaccggggccaccggggccaccgtgacgctcgccaggccg
cccgcgcaagccgcggggtcgggcgccactttgaatgggaacaatgttgcggcgcagtca
ggtgtcggcgcgcacactccgcttgtgaacgacgcccagccgcccacctcgctgtccgtc
agcgcgcggttgcacaccatcaaagcggagcctcccgcaaccatcagtcagtctgcaccg
cagccggctgtcaccccggcctccgtcggcgctccccgggctccggctccggctgctgtc
ggtccggttgggatccgagcgccgacgcctcagatgttggttccgtggctcccacccacc
agcgcacgaccccccggcatacacaacatccagctgccccccgggatggtgcttgtacgc
agtgagagtggtcagctgctggtgattcctcagcaggctctggcccagatgcaggcccag
gcgcagggaggcacggcacctcggaccgcaacaccgacaaacgtgccccctggcccgtct
cctggaaacatcagcagacaagtggctcccagcaccatcatccgacagggctgtccggct
ccaacgtcacttgctgccaccaccactcttcacagacctcctattcttcagaggtcagtt
ggggctgcagtaccaggaatgacccctaggaccggcagccatacagctgggaccacagtc
acctcagtaaaagagacaatggagaatgtgaagaaatgtaagaacttcctgtcgacattg
ataaagctggcatccactgtgagccaatcaacagagactgcagccacagtgagagagctg
gtcaaggagctgctggagggcaaagtggaagctgaggaattcaccagcagattgtacaaa
gagctcaactcccaaccccaaccttaccttgtacctttcctcaagagaagcctcccagcc
ttgaggcagctcactccagactcagccgccttcatccagcagagtcaactcccaaagccg
ggctcacaaagagtctcctccatctcaccgacccccaccacggtggtactgggcaacccc
accccccgtctcactgccccaatcagcagaccgcagctccagccaggcgtcagcaagcca
gggcagactccctcactgcttcagcagcagagagcaatgcttagacctcaggtgaccgta
ccgtcgacccccatggtgactctcaggaatcaggcccctggccgcatcatgctgggacag
cagcaggtccagcacaaagagctccaaccagttcctgtgaggccagagttgttaccagtg
tctagacaagtctctgctgcagcattgactccggctcagaggaacaagctgaaagaggcg
ggcggcacattcaaggacgatgacgacatcaacgatgttgcctccatggctggagtgaac
ctatcggaggaaaacgccaacatcctagcaaccaactcgggacttgtgggagccgtgaca
cattcctgtaaggacgaggctttcctttcctgcgccatgttgcaaaggagaatgctggag
ataggtaggagttatggtgtgacagacctgggtgccgaggtggtgaactatgtctcccat
gcaacacagcatcgactccagaacctgctagaaaaagtttcccaagtggcccagcagaaa
aatgtcaacttaaaggaggatgacaacaacgagcagggcagtgatgttcgcgctcagctc
aagttctttgagcagctggacctgttggagaaacaaagaaaggaggagcaggagagggag
atcctcctgaaggcagctaagtctcgagcacggcaagaggaccccgagcagctgcgtctt
aaacagaaggcaaaagagatgcagcagcaggagctggctcaaatgagacagagggaggcc
aacctgacggcactggcagccatcggccccagaaagaagaggaaaaatctggactctcca
tcctcctctgctgcagctgagggatcaggaacaggcccactgtcgggctccagacccaca
cggcagcgcatcacacgcgtcaatctcagggacctgctcttctgtttggaggaggagagg
tttaccagtcgccctcatttcctctacaagggctttctcaaatag
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