Scophthalmus maximus (turbot): 118309442
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Entry
118309442 CDS
T09850
Name
(RefSeq) serine/arginine-rich splicing factor 6
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau03040
Spliceosome
smau05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118309442
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
118309442
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
smau03041
]
118309442
Spliceosome [BR:
smau03041
]
Common components
Common spliceosomal components
SR proteins
118309442
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
118309442
NCBI-ProteinID:
XP_035487461
LinkDB
All DBs
Position
6:complement(22985902..22990458)
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AA seq
346 aa
AA seq
DB search
MPRVYVGKLSYHVREKDMQRFFSGYGKLLEIDLKNGYGFVEFEDMRDADDAVYELNGKEL
CGERVVIEHARGPRRDGHGGSHGGRSSGYSSWNRPTRDKYGPPMRTEHRLIVENLSSKCS
WQDLKDFMRQAGEVTYADAHKGRANEGVIEFRSRSDLKRAIEKLDGTDVNGRKIRLVEDK
SRRKRSYSGSRSRSRSRRRSRSRKSRSSHSRSRSRSRSQSRSKRRSHSRSGRKSHSTSKR
KASHSKSPEKSRSRTRKSHSPSKSEKSRSRSDTRKSRSKSRSKVKGERESRSRSKEKSSS
RKSRSRSRSHSGSRNGKRISRSPLGRDRELSVSPGKRSTSRSRSRS
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgggtatatgtcggaaagcttagctatcatgttcgcgagaaggacatgcagagg
ttttttagcggctatggtaaattattagagatcgacctgaaaaatgggtacggctttgtg
gagtttgaggacatgcgggatgccgacgatgctgtgtatgaactgaatgggaaggagctg
tgcggtgaacgggtggtcatcgagcatgcccgtggaccacggagggatggacatggcggc
agccatgggggacgcagtagcggctacagcagctggaatcgccctaccagggacaagtat
gggccacctatgcgcactgaacaccgcctcattgtggagaacttgtccagcaagtgcagc
tggcaggacctcaaggattttatgcggcaagcaggtgaagtgacctatgccgatgcccac
aaaggccgcgcaaatgagggcgtcattgagttccgatcccgttcagaccttaagcgagct
atagaaaagctcgatggcactgatgtcaatgggaggaagattcgcctggtggaagacaaa
tctcggcgcaagcgctcgtattctggcagcagatccagatctcgcagcaggcggcgctct
cgcagccggaaaagtaggagttctcacagccgttccaggtcccgctcacgatctcaatct
cgcagcaagcgcaggtctcactccaggtcaggacggaaatcccactcgacatcaaagaga
aaggctagccactctaaatccccagagaagtctcgctcacgcactcgcaaatcacacagt
ccctctaagagcgaaaagtcacgctctcgctcagacactcgcaagtcacgctccaagagc
agatccaaagtcaaaggggagcgagagtcccggagtcgttccaaggagaaatcttccagt
aggaagtcccgaagccgctcacgttcccattcagggagcagaaacggaaaacgcatctca
agatctccacttggcagagatcgtgagctctccgtgtccccaggcaagcgctctacatcc
cgctcaaggtctcgctcttga
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