Scophthalmus maximus (turbot): 118309469
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Entry
118309469 CDS
T09850
Symbol
smarcc2
Name
(RefSeq) SWI/SNF complex subunit SMARCC2 isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
118309469 (smarcc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smau03021
]
118309469 (smarcc2)
03036 Chromosome and associated proteins [BR:
smau03036
]
118309469 (smarcc2)
Transcription machinery [BR:
smau03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
118309469 (smarcc2)
Chromosome and associated proteins [BR:
smau03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
118309469 (smarcc2)
PBAF complex
118309469 (smarcc2)
GBAF(ncBAF) complex
118309469 (smarcc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_1
SWIRM
SWIRM-assoc_3
Myb_DNA-binding
Myb_DNA-bind_6
Chromo
CD99L2
Motif
Other DBs
NCBI-GeneID:
118309469
NCBI-ProteinID:
XP_035487533
LinkDB
All DBs
Position
6:complement(14543078..14554826)
Genome browser
AA seq
1064 aa
AA seq
DB search
MAVRKKDGGPNVKYFEASDTVSQFDNVRVWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQ
EEVFGRHVSNPPLTKLPMKCFLDFKSGGALCHILAAAYKFKSDQGWRRFDFQNPSRMDRN
VEMFMTIEKSLVQNNCLTRPVIYLSPDIEPKLLGKLKDIIKRHQGSVTEDKASSSHVVVP
IPNSLEEEEWVRPVMKRDKQVLLHWGYFPDSYDTWIPASEIEAGVEDAPSPEKPRKVHAK
WILDLDQYNEWMNEEDYEVGEGCPKRKRISAKTLTDEVTTPDERRDKKPGSAKKRKRSPS
PSPTPPTQESKKKNTKKGPTTPYTKSKRGQREEEQEEPSKDLDEASPVPASEEGNPAKTN
NTKKDSDSTPVKGGTDLDEQEDESMETTGKEEEEGSPSVKGEPVKGSDLHEDNVTEQTHH
IIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTS
TACRRNLAGDVCAIMRVHAFLEQWGLINYQVDSESRPTPMGPPPTSHFHVLADTPSSLVP
LQPKTAQTPATQQMMSFPDKVKDKPADLQNFGLRTDMYSKKNASAKSKSAASSMREWTEQ
ETLLLLEGLEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLEDSSSTLGPLAFQPI
PFSQAGNPVMSTVAFLASVVDPRVASAAAKSALEEFSRMKEEVPAALVEAHVRRVEEAAR
VSGRQDPLYGLEGSGIAGTGLEEGDRPEESTDESKSESQSSEEKREAKESKDGAIEEEEK
QAENGKKEEERGREPEGEREADKTESDLGDGEKEKEGKEGTEEGQREGESEGERKAKVER
EVGEGNLATAAASALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELET
IMDREREALEYQRQQLLADRQSFHMEQLKYAEMRARQQHFQQIQHQQHSQAGGPHANQPA
PGLPPQAVAASQQAPSTPAPQPAASPAPPASSVPAPESQPPQGAHTSPPCPPSQTPATHS
NSNSNSNSNSNSNSNSSTTPVLHEPNAPVSGETLHPAAPVPPPQ
NT seq
3195 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcggaagaaagacggcggcccgaatgtaaaatatttcgaagcgtctgatacc
gtctctcagtttgataatgtccgcgtctggctgggaaagaattacaaaaagtacatccag
gccgagcccccgaccaacaagtctctgtccagcctggtggtccagctgctccagttccag
gaggaggtgttcggtcgacatgtcagcaaccctccgctcaccaaactgcctatgaagtgt
ttcctggacttcaagtcagggggggctctctgtcacatcctggctgctgcctacaagttc
aagagtgaccaaggatggcgcaggtttgacttccagaatccgtctaggatggaccgaaat
gtggagatgttcatgaccatcgagaagtcgttagtgcagaacaactgcctgactaggcct
gtcatctacctgagccctgacatagaaccaaaactgcttgggaaactgaaagacatcatc
aaacgacatcagggttcagtgactgaggacaaggcctccagctcccacgttgtcgtgcct
attcctaacagtctggaggaagaggagtgggtgcgtcccgtgatgaagagagataagcaa
gtgctgctccactggggatatttccccgacagctatgacacctggatcccagccagtgag
attgaggctggggtggaggatgctccgagcccagaaaaacccaggaaggttcatgccaag
tggattttagacctggaccagtataacgagtggatgaatgaagaggactacgaagtgggt
gagggctgccctaagaggaagaggatctctgccaagaccctgacagatgaggtgacaaca
cccgacgagaggcgggacaagaagcccggcagtgccaagaagaggaagcgctcaccgtcg
ccctcccccacccctccaacccaggagagcaagaagaagaacaccaagaaagggccaaca
accccgtacaccaagtctaaacggggccagagggaggaagaacaggaggagcccagtaag
gacttagatgaagcgtctcctgttccagcatctgaagagggaaacccagctaagacaaat
aacactaagaaagactctgattcaactccagtcaagggaggaacagatttggatgagcaa
gaagacgagtccatggaaacaacagggaaggaggaggaagaaggctctccgagtgtgaag
ggtgaaccagtgaaaggctcagaccttcacgaggacaatgtgactgagcaaacccaccac
atcatcatcccgagctatgctgcctggtttgactacaacagtgttcatgccattgagcgc
agagccctgccagagtttttcaatggaaagaacaaatcaaaaacccctgagatttacctg
gcatacaggaacttcatgatcgacacctatcgactgaaccctcaggagtacctcacctcc
actgcctgccgcaggaacttggctggagatgtgtgtgcaatcatgagagttcacgccttc
ctggagcagtggggtctgatcaactaccaggtggactctgagagtcgaccaacacccatg
ggtcctccacccacctctcacttccatgtcctggcagacactccatcaagtctggtgccc
ctgcagcctaagaccgcccagactcctgccacccagcagatgatgtcattcccagataaa
gtgaaagataaaccagcagatctgcaaaactttgggctgcggacggacatgtacagcaag
aagaatgcctctgcaaagagcaagagtgcagcaagctccatgagggagtggacagaacaa
gaaacactactactacttgagggcttggagatgtacaaggacgactggaacaaagtgtca
gaacatgtgggcagccgtacgcaggatgagtgtatcctgcacttcctgcggctgcccatt
gaagacccctacttggaggacagctcctcgaccctgggaccactggccttccagcccata
cctttcagccaggcaggaaaccctgtcatgagcactgtggccttcctcgcgtcagtagta
gacccacgtgtggcctcggctgcagctaaatctgctctcgaggagttttctcgtatgaaa
gaggaggtacctgctgccctggtcgaggctcatgtgcggcgggtggaggaggcagccaga
gtgagcggccgccaggaccctctgtacggcctggagggtagtggcattgcaggcactggc
ctggaggagggagacagacctgaggaaagcactgatgaaagcaagagtgagagccagtca
agtgaagagaagagagaggccaaggaaagcaaagatggagcgattgaggaagaggaaaag
caggcagaaaatggaaagaaggaggaagagagaggaagagaacctgaaggagagagggag
gcagacaaaacagagtccgatcttggtgacggcgagaaggagaaggagggaaaagaggga
acagaggaaggacaaagagaaggagagagtgagggagaaaggaaggccaaggtagagcgt
gaagttggagaggggaacctggccactgctgctgcatctgctctcgctgccgctgccgtg
aaagctaagcacctggctgcagtggaagagaggaagatcaaatctcttgtggctctgctg
gtggaaactcaaatgaagaagctggagattaaactgcgacactttgaagaactggaaacc
atcatggacagagagagggaggctttggagtaccagcggcagcagctgctggctgaccgt
caatccttccacatggagcagttgaagtatgctgagatgagggctcgccagcagcacttc
cagcagattcagcaccagcagcacagccaagccgggggccctcatgccaaccagccggcc
ccaggcctcccgcctcaggccgtggcagcgagtcagcaggctcctagcacaccagcaccg
cagccggctgccagccccgcccctccggcctcttctgtcccggctcctgagtcccagccc
cctcagggagctcacacctcgcccccctgccccccaagccagaccccggcgacccactcc
aactccaactccaactccaactccaactccaactccaactccaactccagcactacacct
gttcttcatgagcccaacgcccccgtctccggggaaacactccaccctgcagctccagtc
cctccaccacagtga
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integrated database retrieval system
