KEGG   Scophthalmus maximus (turbot): 118309507
Entry
118309507         CDS       T09850                                 
Name
(RefSeq) ras-related protein rab7 isoform X1
  KO
K07897  Ras-related protein Rab-7A
Organism
smau  Scophthalmus maximus (turbot)
Pathway
smau04137  Mitophagy - animal
smau04140  Autophagy - animal
smau04144  Endocytosis
smau04145  Phagosome
smau04148  Efferocytosis
smau05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:smau00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    118309507
   04145 Phagosome
    118309507
   04140 Autophagy - animal
    118309507
   04137 Mitophagy - animal
    118309507
   04148 Efferocytosis
    118309507
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    118309507
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:smau04131]
    118309507
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:smau04147]
    118309507
   04031 GTP-binding proteins [BR:smau04031]
    118309507
Membrane trafficking [BR:smau04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab GTPases
    118309507
Exosome [BR:smau04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   118309507
  Exosomal proteins of other body fluids (saliva and urine)
   118309507
  Exosomal proteins of colorectal cancer cells
   118309507
  Exosomal proteins of bladder cancer cells
   118309507
GTP-binding proteins [BR:smau04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab7/9 [OT]
    118309507
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 GTP_EFTU Gtr1_RagA RsgA_GTPase cobW Septin nSTAND3
Other DBs
NCBI-GeneID: 118309507
NCBI-ProteinID: XP_035487609
LinkDB
Position
6:20017901..20022962
AA seq 207 aa
MTSRKKVLLKVIILGDSVVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ
IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF
MLLGNKIDLENRQVTTKRAQAWCQSKNNIPYFETSAKEAVNVEQAFQTIARNALKQETEV
ELYNEFPEPIKLDRNERAKPSAETCSC
NT seq 624 nt   +upstreamnt  +downstreamnt
atgacgtctaggaagaaagtactactcaaagtcatcatccttggagactctgtagttggg
aagacctcattgatgaaccagtatgtgaataagaagttcagtaaccagtacaaagccaca
ataggtgctgatttcctcacaaaagaagtcatggttgatgacagacttgtcacaatgcag
atttgggacacagccggtcaggagaggttccagtctttaggtgttgcattctaccgtgga
gcagactgctgcgtcctggtgtttgatgtgacggcacccaataccttcaagacccttgac
agctggagggacgagttcttgatccaggccagcccccgagacccagagaacttccccttc
atgttgctgggcaacaagatagacttggagaacagacaggtaacaaccaagcgggcacag
gcttggtgtcagagcaagaacaacatcccatatttcgaaaccagcgccaaggaggcagtc
aatgtggagcaggccttccagactattgcacgcaatgctcttaaacaggagaccgaggtg
gagttgtacaatgagtttcctgagccaatcaagctggacaggaacgagcgggccaagccg
tcagcagagacctgcagctgctga

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