KEGG   Scophthalmus maximus (turbot): 118309611
Entry
118309611         CDS       T09850                                 
Symbol
rrp9
Name
(RefSeq) U3 small nucleolar RNA-interacting protein 2 isoform X1
  KO
K14793  ribosomal RNA-processing protein 9
Organism
smau  Scophthalmus maximus (turbot)
Brite
KEGG Orthology (KO) [BR:smau00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:smau03009]
    118309611 (rrp9)
Ribosome biogenesis [BR:smau03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    118309611 (rrp9)
SSDB
Motif
Pfam: WD40 Beta-prop_TEP1_2nd WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_EML WDR55 EIF3I Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C NBCH_WD40 Beta-prop_IFT122_1st Beta-prop_WDR75_1st Beta-prop_SCAP WD40_MABP1-WDR62_1st ANAPC4_WD40 Beta-prop_DCAF4 WDR90_beta-prop_4th Beta-prop_IP5PC_F Beta-prop_IFT140_1st Beta-prop_SPT8 Beta-prop_DCAF12 Beta-prop_Vps41 PEP5_VPS11_N Beta-prop_WDR19_1st Beta-prop_IFT122_2nd Beta-prop_WDR75_2nd WD40_like Beta-prop_BBS7
Other DBs
NCBI-GeneID: 118309611
NCBI-ProteinID: XP_035487841
LinkDB
Position
6:complement(11781299..11786731)
AA seq 486 aa
MSSSFFIKTKENSKFSKKGKSISAPKRKGDGDSGAKSKVRAKKPNAKFNEEISSDSEAES
PVVPRKRQPVEDIDYAETPQEKKLRLAKLYLEQLKEADDNKAEDDDFETDLVAGRLEEDV
LEQKGKLQRLIAKDLIQPDASEIRVLRGHKLPITCLVISPDDKCIFSAAKDCSIIKWDVE
SGKKLHTIPGGRKGTEDRHVGHTAHILCMDISSDGKYLATGDMNKLIMIWEGETCKHLYK
FTGHKGPVSGLSFRKGTHDLYSASHDRSIKVWNVDENAYVETLFGHQDAITGLDSLSRER
CVTAGGRDRTVRVWKIAEESQLVFHGHESSIDCIQLINEEHMITGADDGSVSLWSVNKKK
PLSTVKQAHGCHGDAALEQPHWVASVAALQNSDTVASGASSCSHNSHVQLWKCGQYYRRL
ERLFSVPVSGFVNSLKFSSSGQFLVAGVGQEHRLGRWWRLKEAKNGIYIIPLKRKPPNPE
ENKMAE
NT seq 1461 nt   +upstreamnt  +downstreamnt
atgtcgtcgtcttttttcataaagacaaaagaaaactcaaaattttccaaaaaggggaaa
agtatatcggcgccaaaacgaaagggcgatggcgactccggtgccaagagcaaagtgcgg
gcgaagaaacccaacgccaagttcaacgaagagatctccagcgactccgaggcggagagt
cccgtggtgcccaggaagagacagcccgtcgaggacatcgactatgcggaaacgccccaa
gagaagaagctcagattagccaaactttaccttgaacagttgaaggaagcagatgataat
aaagcagaagatgatgactttgagacggatctggttgcaggacgactcgaagaagatgtg
cttgaacaaaaaggaaaacttcagcgacttattgccaaagatctcatccagccagatgct
tcagagatccgggtgttgagaggacacaaacttccaattacttgtctggtcatctcccct
gatgacaagtgcatcttttctgccgccaaagactgctccatcattaagtgggatgttgag
agtgggaagaaactgcacacgatacctggtggaaggaaaggtacagaggatcggcatgtt
ggacatacagcacacatcctgtgcatggacatatcatcagatggaaaatacttagcgact
ggagacatgaacaaactgatcatgatttgggagggagaaacctgtaaacatctctataaa
ttcacaggacacaaaggccctgtgtcgggtctttctttcaggaagggaactcatgatctg
tacagcgcatctcatgaccgctcaatcaaggtctggaatgtggatgagaatgcatacgtg
gaaactctctttgggcatcaggacgcaatcacaggactggacagtttgagccgtgagcgc
tgtgtgacagcaggcggacgggaccgcactgtgagggtgtggaagatagccgaggagtct
cagctcgtcttccacggccacgagagttcaatcgattgtatccagctgataaacgaggag
cacatgataacaggagctgatgatggctctgtgtctctttggagtgtcaacaagaagaag
cctctcagcacagtgaagcaggctcacggttgccatggtgatgccgcgctggagcagcct
cattgggtcgcatcagtagctgcgcttcaaaactcggataccgtcgcctcaggtgcctct
agctgttcacacaactcgcatgtgcagctctggaagtgtggccagtattaccgtaggctg
gagcgactgttcagtgtaccagtgtctggtttcgtcaacagcctgaagttttcgagctcc
gggcaattcttggtggcaggagtgggacaggagcacaggttgggccgatggtggaggcta
aaagaggccaagaatgggatctatattattcctctcaaaaggaagcctcctaatccagag
gaaaacaaaatggctgagtag

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