Scophthalmus maximus (turbot): 118309694
Help
Entry
118309694 CDS
T09850
Name
(RefSeq) plexin-A1-like isoform X1
KO
K06820
plexin A
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
118309694
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Plexin_cytopl
TIG
Plexin_RBD
TIG_2
Sema
TIG_plexin
PSI
PSI_PlexinA-B
PSI_integrin
Motif
Other DBs
NCBI-GeneID:
118309694
NCBI-ProteinID:
XP_035487984
LinkDB
All DBs
Position
6:17411002..17582215
Genome browser
AA seq
1897 aa
AA seq
DB search
MCPLARSAAFPGLGNLVLFLGLLLTMSSSFCGGQPPTFKRFTPAEWGLTHLAIHNKTGEV
YVGAVNWIFKLSSNLTKLRSHMTGPVVDNEKCYPPPSVQSCPHDLAQTPNVNKLLLIDYA
QNRLIACGSTSQGICQFLRLDDLFKLGEPHHRKEHYLSSVAESGTMSGVIISSPHSTTSK
LFIGTPIDGKSEYFPTLSSRKLMENEENADMFSFVYQDEFVSSQLKIPSDTLSKFPAFDI
YYVYSFSSEQFVYYLTMQLDTQLTSPDASGEQFFTSKIVRLCVDDPKFYSYVEFPIGCTK
DGVEYRLVQDAFLARPGRQLANSLGISENEDILFTVFSQGQKNRAKPPKESALCLFTLRR
IKEKIKERIQSCYKGDGKLSLPWLLNKELACINSPLQIDDNFCGQDFNQPLGGTSTIEGT
PLFIDKDDGMTSVAAYDYRGNTVAFVGTRNGKLKKILVNSVSPNRPAVLYEKVTVSEGGS
PLLRDMLFSPDLQHIYTLTDRQVVRVPVESCEQYTTCGECLGSRDPHCGWCVLHNVCSRK
DRCERAGEAQRFASDQRQCVELTVQPGNISVTMSEVQLVLQARNVPDLSAGVNCSFEDYV
ETEGRIQGGHIFCLSPSMRDIIPITRNKGDKRVVKLYLKSKETGKKFASVDFVFYNCSVH
QSCLSCVNGSFPCHWCKYRHMCTQNANDCSFQEGRVNISEDCPQILPSTQIYIPVGVTKP
ITLAAKNLPQPQSGQRNYECVFHIQGETHSVPALRFNSTSIQCQKTAYTYDGNDISDLPV
DLSVAWNGNFVIDNPYNIKAHLYKCYALRDSCGMCLKANPRFECGWCVQEKKCSLRQECT
PPESTWMHATTGNSRCAHPKITKLHPETGPRQGGTMLTITGENLGLQFKDIQNGVRIGKV
TCNPQEDQYISAEQIVCRLNDATGYRVQEAQVEVCVRDCIHPDYKAVSTKAFTFVSPYFT
RVHPSTGPLSGGTRITIEGSHLNAGSGVSVKIGLNSCSFERRSSKEIVCVTPSGLASGTT
PVMVDINSAELRNPEVKFNYTDDPTILKIEPDWSIASGGTMLTITGTNLATIKEPKMRAK
YGSAKSENNCTVVNNTVMMCLVPSVAGSDKGFSEVGSSPDEIGFVMDDVRSVLVVNETFS
YHPDPVFEPLSPSGMLELKPSSPLILKGRNLIPAAPGNTKLNYTVLIGETPCVLTLSESQ
LLCEWPNLTGEHKVTVRVGGFEYSPGTLQIYSDSLLTLPAIIGIGGGGGLLLLVIIVVLI
AYKRKSRDADRTLKRLQLQMDNLESRVALECKEAFAELQTDIHELTQELDGAGIPFLDYR
TYAMRVLFPGIEDHPVLKEMEVRVPANVEKALTLFGQMLTKKHFLLTFIRTLEAQRSFSM
RDRGNVASLIMTALQGEMEYATGVLKQLLSDLIDKNLESKNHPKLLLRRTESVAEKMLTN
WFTFLLYKFLKECAGEPLFMLYCAMKQQMEKGPIDAITGEARYSLSEDKLIRQQIDYKTL
TLHCVNPENENAPEVTVKSLNCDTVTQVKEKLLDAVYKGTPYSQRPKASDMDLEWRQGRM
ARIILQDEDVTTKIDNDWKRLNSLAHYQVTDGSVIALVPKQNSAYNISNSSTFTKSLSRY
GTREESMLRTASSPDSLRSRTPMITPDLESGTKLWHLVKNHDHSDQREGDRGSKMVSEIY
LTRLLATKGTLQKFVDDLFETIFSTAHRGSALPLAIKYMFDFLDEQADKHSISDSDVRHT
WKSNCLPLRFWVNVIKNPQFVFDIHKNSITDACLSVVAQTFMDSCSTSEHKLGKDSPSNK
LLYAKDIPNYKNWVERYYSDISRMPVISDQDMSAYLAEQSRLHANQFNSMSALHEIYSYI
VKYKDEILSALERDEQARRQRLRSKLEQVIDTMALSS
NT seq
5694 nt
NT seq
+upstream
nt +downstream
nt
atgtgtcccttagcccggtcagcggctttccctggcctggggaacctggttctcttcttg
gggctcttgcttaccatgagctcatccttctgtggaggccaacccccaaccttcaaacga
tttacccctgctgagtgggggctcacacatctggccatacacaacaaaactggagaagtc
tatgttggagccgtcaactggattttcaagctatcaagcaacttgaccaaactgcgcagc
cacatgactggcccagtggtggacaatgagaagtgctatcctcctcccagtgtccagtct
tgcccacatgacttggcccagaccccaaatgtgaataaacttcttctcatagactacgca
cagaaccgcctcattgcctgtggaagtacctcgcagggcatctgccagttcctgcgtctg
gacgacctttttaagcttggtgagccccaccaccgcaaggagcactacctctccagtgtg
gcagagtctggtaccatgtctggggtgatcattagctccccccacagtactaccagcaag
ctatttattggaacccccattgatggcaagtctgaatactttccaaccctgtccagccga
aaactgatggagaatgaagaaaatgctgacatgttcagctttgtctatcaggatgagttt
gtctcctctcagctgaagatcccctcggacactctgtccaagttccctgccttcgacatc
tattatgtgtacagctttagcagtgagcagtttgtctattacttaacaatgcagctggat
actcaactgacctcccctgatgccagcggagagcagttcttcacttccaaaattgtccga
ctctgcgtagatgaccccaagttttactcctacgtcgagttcccaattggctgcactaaa
gatggggtagagtaccgcctggtgcaggatgccttcttggctcgaccaggccggcagctg
gccaactctctggggatctcggagaatgaagacatcctcttcacagtcttttctcagggt
cagaagaatcgggccaaaccacccaaagagtcagcattgtgtctgttcaccctaaggagg
ataaaagagaagatcaaagaacggattcagtcctgttacaagggagatgggaaactctcc
ctgccctggctgctcaacaaggagctagcctgcatcaactcgccactgcaaattgacgac
aacttctgcggccaggacttcaaccagcctctagggggaaccagcaccatcgagggcacc
cccctcttcatcgacaaagacgatgggatgacctcggtggcggcgtacgactaccgtggc
aacactgtggcttttgtcggcacacgcaatggcaaactgaagaagatcctggtgaattct
gtgagtcccaaccgtccagcggtgttgtacgagaaagtgaccgtgagtgagggaggaagt
cccttactgagagacatgctgttcagcccagacctgcagcatatctacacactcaccgac
agacaggtggtgagagttccagtggagagctgtgagcagtacaccacttgcggggagtgt
ttgggctccagagaccctcactgtggatggtgtgtcctccacaacgtttgttcacgtaag
gaccgttgtgaacgagcaggagaagcccagaggtttgcctctgaccagaggcagtgtgtg
gagctcactgttcaaccaggaaacatctctgtcaccatgtctgaagtccagctggtcctc
caggctcgtaacgtgcccgatctgtcagcaggggtcaactgctccttcgaggactatgta
gagacggagggacggatccagggtggacacatcttctgcctctccccctccatgcgagac
atcatcccgatcacaaggaacaaaggtgacaagcgtgtggtgaagctctatctgaaatcc
aaggaaacaggcaagaagtttgccagcgtcgactttgtcttctacaattgcagcgtccac
cagtcctgcctttcctgtgtaaatggctccttcccctgccactggtgcaagtaccgccac
atgtgcacccagaacgccaatgactgctctttccaggagggacgtgtcaacatctctgag
gactgcccacagatccttccctcaacccagatctacatacccgtcggcgtgaccaagccg
atcaccctagcagccaagaacctgccccagccccaatcaggacagaggaactacgagtgc
gtcttccacatccagggggagactcacagtgtccccgccctgcgcttcaacagcacctcc
atccagtgccagaaaacagcgtacacctatgatggcaatgacatcagtgacctgccggtg
gacctgtccgtggcttggaatggaaactttgtcattgacaacccctacaacatcaaagcc
cacctgtataagtgctacgcactaagggacagctgtgggatgtgtttgaaggcaaacccc
aggtttgagtgcggctggtgcgtgcaggagaagaagtgctccctgagacaggagtgtact
cctcccgagagcacttggatgcatgccaccacaggaaacagccgctgtgcacaccccaag
atcaccaagttgcatcctgagactgggcccagacagggaggaaccatgctcaccatcact
ggcgagaatctgggtctgcagttcaaagacatccagaatggagtgcgaatcggaaaggtg
acctgcaaccctcaggaggaccaatacatcagcgctgaacagattgtgtgtcggctcaat
gatgcaacaggctaccgggtgcaggaggctcaagtggaggtgtgcgtgagggactgcatt
caccccgactacaaagcagtctcaaccaaggccttcaccttcgtgtctccgtactttacc
cgtgtccatccctccacgggcccgctgtctggaggaaccaggatcaccatcgaaggcagt
catctcaatgcaggaagtggcgtgtctgtgaagataggacttaactcctgcagctttgaa
aggcggagcagcaaggagatagtgtgtgtgaccccatcgggtctagcctcaggaaccacc
ccagtcatggtggacatcaactctgcggagctgaggaacccagaggtcaagttcaactac
acagacgatcctaccattctcaagatcgagcctgactggagcattgcgagtggaggaacc
atgttgaccattactgggaccaacctggcaaccatcaaggagcctaaaatgagagccaag
tacggatctgccaagtctgaaaataactgtacggttgtcaacaacactgtgatgatgtgt
ctggtgccctctgtggccggatccgacaaaggcttctcggaggtcggcagcagtcctgac
gagatcggttttgtcatggatgatgtgcgctctgtgttggtcgtcaacgagactttcagc
taccaccctgaccccgtgttcgaacctctgagcccctcaggcatgttggagctgaagccc
agctcaccactcattctcaagggccgtaacctaattcccgcagccccaggaaacactaag
ctgaactacacagtgctgatcggcgagactccctgtgttctcaccctgtctgagagccag
ctgttgtgtgaatggccaaacctgaccggagaacacaaagtaactgtgcgtgttggaggc
tttgagtactcaccagggaccctgcaaatatactcagacagcctcctcaccctgcctgcc
atcattggtatcggaggaggtggtggcctcctcttgctggttatcattgtggtgctgatt
gcttataagaggaagtcacgggatgccgaccgcaccctcaagcggcttcaactgcagatg
gacaacctggaatccagggtggcccttgagtgcaaagaagcctttgcagaactgcagacg
gacatccacgaactcacccaggagctggatggagcaggaatccctttcctggactaccgc
acatacgccatgagagtcctcttccctgggattgaggaccatcctgtgctcaaggagatg
gaggtacgggtccctgccaacgtggagaaggctctgacgttgttcggccagatgctgacc
aaaaagcacttcctgcttaccttcatccgcaccctggaggcgcagcggtccttctccatg
cgagacagaggcaacgtggcgtccctcatcatgacagcactgcagggggagatggaatat
gccacgggtgtcctcaaacagctcctgtctgacctcattgacaaaaacttggagagcaag
aaccacccgaagctcttactcaggaggacggagtcagtcgctgagaagatgctcaccaac
tggttcaccttcctgctttacaagttcctcaaggagtgtgctggtgagcctctcttcatg
ctgtactgtgccatgaagcagcaaatggaaaagggaccaatagacgcgatcacgggagaa
gcccgctactcccttagcgaggacaaactcatcagacagcagattgactacaagactttg
acgctgcactgtgtgaacccagagaacgaaaacgctccggaggtgacggtgaagagcctg
aactgtgacacagtgacgcaagtgaaggagaagctgctggatgctgtgtacaagggaacg
ccgtactcccagagaccaaaggcctcggatatggacctggaatggcggcagggcaggatg
gctcgcatcatcctccaggacgaggacgtcaccactaagatcgacaatgactggaagaga
ctcaactccctggctcactaccaggtgacagatggctcagtgattgccctggtgcctaaa
cagaactcagcctacaacatctccaactcctccacgttcaccaagtccctcagcagatac
ggtacgagagaagagagcatgctgaggacagccagcagtccagacagcttgcgctccaga
actcccatgatcacccccgacctcgagagcggcaccaaactgtggcacctggtcaagaac
cacgatcactcggatcagagggaaggggacagagggagcaagatggtctctgagatctat
ctaacccgactgctggccaccaagggtacactccagaagttcgtggatgacctgtttgag
accatcttcagcacagcacacagaggcagcgctctgccactcgccatcaaatacatgttt
gacttcctggatgagcaggcggacaaacactccatatcagactctgacgtacggcacact
tggaagagcaactgtcttccgttgcggttctgggtgaatgtgatcaagaacccgcagttc
gtctttgacatccacaagaacagcattacagacgcctgcttatctgtggtggctcagact
ttcatggactcgtgttcgacatcagagcataaactggggaaggactcgccctcgaacaag
ctgctctacgctaaagacatccccaactacaagaactgggtagaaaggtactactctgac
atctccaggatgccagtcatcagcgaccaggacatgagtgcgtacctggcggagcagtcg
cgcctgcatgccaaccagttcaacagtatgtcggccctacatgagatctactcctacatt
gtcaagtacaaggacgagatcttgtcagctttggagcgggacgagcaggcgaggagacag
agactgcggagcaagctggagcaggtcattgacacaatggccctgagcagctga
DBGET
integrated database retrieval system