Scophthalmus maximus (turbot): 118309745
Help
Entry
118309745 CDS
T09850
Symbol
chd5
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 5 isoform X1
KO
K14435
chromodomain-helicase-DNA-binding protein 5 [EC:5.6.2.-]
Organism
smau
Scophthalmus maximus (turbot)
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
smau03036
]
118309745 (chd5)
Chromosome and associated proteins [BR:
smau03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
118309745 (chd5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDCT2
CHDII_SANT-like
Helicase_C
CHDNT
DUF1087
PHD
Chromo
PHD-1st_NSD
ResIII
HDA2-3
PHDvar_NSD
HTH_Hrp3
PHD_2
DEAD
AAA_22
Motif
Other DBs
NCBI-GeneID:
118309745
NCBI-ProteinID:
XP_047188869
LinkDB
All DBs
Position
6:complement(778596..811875)
Genome browser
AA seq
2025 aa
AA seq
DB search
MGCIAMATDQTSQSGHRFGGDELKMPGSLSNEDEGQDDMDFGDDVPDEDDEGERDAVPLA
ALDGFFSDDDSLKQQQQKKKKAKKMKEGKTPKVKKRKKEGGVQPRADSDPEEMSEVEEER
ERPEVGSESESSVYGPTKKKKKKPKEKKEKKPRKKKRDEEEEDDDDDDGGTKEPKSSGQL
MQEWGLEDVQYGFTEDDYKTITNYKAFSQFLRPLIAKKNPKIPMSKMMTVLGAKWREFSA
NNPFKGASATAVAAAVAAAVEMVTVAPPAPVGSSQPTAQPGPIKKAKTKEGKGPGVRKRS
KSVKDVKKKPKPKKTKSKASQSVKKKKTSSSEEDFLEESDFDDISIHSASVFSDALGAAT
KKKARRGRKKRKKEDGDGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPE
GKWSCPHCEKEGIQWEAKDEEEEEEEAAGEEEDDHMEFCRVCKDGGELLCCDTCPSSYHI
HCLNPPLPEIPNGEWLCPRCMCPPLKGKVQKILHWTWGEPPLPAELPAGPDGKPNDPLTR
PPLKGHAEREFFVKWAGLSYWHCSWVSELQLELYHTVMYRNYQRKNDMDEPPPFDYGSGE
EELNNEKRKSKDPQYAVMEERFYRYGIKPEWMVIHRVLNHSFDKDGDVHYLIKWRDLPYD
QCTWEVDDFDVPEYLSHIASYWDHREQILGEDQRPLVARKGQKLKEDHQKREVPPDAPII
DPTIKFEHQPWYINATGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLY
SLYKEGHSKGPFLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKDSRAIIRENEFTFEDS
AVKSGRKVFRMKKDTPIKFHVLLTSYELITIDQAVLGSITWACLVVDEAHRLKNNQSKFF
RILNGYKIYYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKL
HDLLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKFILTRNFEALNSKGGGNQV
SLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGNQLVKSSGKLTLLQKMLKKLKDEG
HRVLIFSQMTKMLDLLEDFLEFEGYKYERIDGGITGGLRQEAIDRFNAPGAQQFCFLLST
RAGGLGINLASADTVIIYDSDWNPHNDIQAFSRAHRIGQNRKVMIYRFVTRGSVEERITQ
VAKRKMMLTHLVVRPGLGSKTGSMSKQELDDILKFGTEELFKDEIEAARAARAMGDNNKD
SEEGNVIHYDDDAISKLLDRSQDATEDTEIQNMNEYLSSFKVAQYVVKEEDGEEEVEREI
IKQEENVDPDYWEKLLRHHYEQQQEDLARNLGKGKRIRKQVNYNDTTQEDQEWQDDLSDN
QSEYSVGSEDEDEDFEERPEGGRRQSRRQLKNERDKPLPPLLARVGGSIEVLGFNARQRK
AFLNAIMRWGMPPQDAFNSHWLVRDLRGKSEREFRAYVSLFMRHLCEPGADGAETFADGV
PREGLSRQHVLTRIGVMSLVRKKVQEFEHVNGKLSSPDLIPIGMELKKLTESVSSDPNTP
VPASPVATQPGTPVPPEKTECLSGTAEDKETAEPDGRRVSEQETPGAAPAAAPETAADSG
ESKAGSRDRPGDERDGTQSPSANRRESERPSSQTSPTPESGREAEKSSDRADRDSPPAKT
EDRENKSDDVKSEDALESRLNGDKDGVDETDESRKEDRNGFKARFMFNIADGGFTELHTL
WQTEERAAMSSGKMHDIWHRRHDYWLLAGIVTHGYARWQDIQNDPRYAILNEPFKTEMHK
GNYLEMKNKFLARRFKLLEQALVIEEQLRRAAYLNMTQDASHPAMALNTRFAEVECLAES
HQHLSKESLAGNKPANAVLHKGLHNSISLLNQLEELLSDMKADVTRLPNMLSRIPPVSAR
LQMSERSILSRLTSRGSEPPPQQPFSPGAFGCSQMYGSSFGFRAAGGQPMVNYSQMPMGP
YISVSSNGPPPPTSHLDKKSLDSLRDVGTPDLKSGKPSDVICIED
NT seq
6078 nt
NT seq
+upstream
nt +downstream
nt
atgggatgcatcgccatggcaacagaccagacgtcacaatctgggcataggtttgggggc
gatgagctgaagatgccggggtcgctgagtaatgaagacgagggacaggacgacatggat
tttggagacgatgtgccagacgaggacgacgaaggcgagcgcgacgccgttcccctcgcg
gccctcgacggcttcttctctgatgacgactcgctcaaacaacaacagcagaagaagaag
aaggccaagaagatgaaggaggggaaaacacccaaagtgaagaagaggaaaaaggaggga
ggagttcagccccgagcggacagcgacccggaggagatgtcggaggtggaggaggaacgg
gagcgtccggaggtcggctcggagagcgagagcagtgtgtacggtcccaccaagaagaag
aagaagaaaccaaaggagaagaaggagaagaagccaaggaagaagaagagagatgaggag
gaggaggacgatgacgacgacgacgggggcacgaaggaaccaaaatcctccggccagctg
atgcaggagtggggtctggaagacgtccagtacggattcacagaggacgactacaagacc
atcaccaactacaaggccttcagccagttcctcaggcctctcatcgccaagaagaacccc
aagatccccatgtccaagatgatgacggtgttgggcgccaagtggcgagagttcagcgcc
aacaacccgttcaagggcgcgtccgccaccgccgtggccgccgccgtggccgccgccgtg
gaaatggtcaccgtggctccgccggcgcccgtcggcagcagccagccgaccgctcagccg
gggccgatcaagaaggccaaaaccaaagaggggaagggacctggagtgaggaagaggagt
aagtctgtgaaggacgtgaagaagaaacccaagccgaagaaaaccaaatcaaaggcgagt
cagagtgtgaagaagaagaagacgtcctcaagcgaggaagacttcctggaggagtcggac
tttgatgacatcagcatccacagtgcctcagtcttctctgacgccctgggggcggccacc
aagaagaaggcccggcgtgggcggaagaaaaggaaaaaggaggacggcgacggctacgag
acggaccaccaggactactgcgaggtctgccagcaggggggggagatcatcctgtgtgac
acctgccccagagcctatcacctggtgtgtctggacccggagctggagaaggcccccgag
ggcaagtggagctgcccgcactgtgagaaggaggggatccagtgggaggccaaagatgaa
gaggaggaggaggaggaggcggcgggagaggaggaggacgaccacatggaattctgccga
gtgtgtaaagacggaggggagctgctgtgctgcgacacctgcccctcgtcctaccacatc
cactgcctcaaccctccgctgcccgagatccccaatggggagtggctgtgtccacgctgc
atgtgccctcccctgaagggtaaagtacagaagatcctgcactggacgtggggggaacct
cctctcccggccgagctgcccgccggtccggacgggaagcccaacgacccgctgaccagg
ccgccgctcaagggccacgcggagcgggagttcttcgtgaagtgggccggcctgtcgtac
tggcactgctcctgggtcagcgagctgcagctggagctctatcacaccgtcatgtaccgg
aactaccagcggaagaacgacatggacgagccgccgccgttcgactacggctccggagag
gaggagctcaacaacgagaagaggaagagcaaggacccccagtacgccgtgatggaggag
cgcttctaccgctacggcatcaaacccgagtggatggtcattcaccgggtgctgaaccac
agtttcgataaggacggcgacgtccactacctgatcaagtggagagacctgccctacgac
cagtgcacctgggaggtggacgacttcgacgtccccgagtacctcagtcacatagcgagt
tactgggaccacagggagcagattctaggcgaggaccagcgccccctggtggcgaggaaa
ggacagaaactcaaggaggaccatcagaagagggaggtccctcccgacgctcccatcata
gaccccaccatcaagttcgagcaccagccgtggtacatcaacgccacgggaggaaccctg
cacccgtaccagctggagggtctgaactggctccggttctcctgggcccagggcaccgac
accatcctggccgacgagatgggcctggggaagacggtgcagaccatcgtgttcctctac
tcgctgtacaaggagggccactcgaaggggcccttcctggtgagcgcgcccctctccacc
atcatcaactgggagagggagttcgagatgtgggctccagatttctacgtggtgacgtac
acgggcgacaaagacagtcgggcgatcatcagggagaacgagttcacgttcgaggacagc
gcggtgaagtcgggacgcaaggtgttccgcatgaagaaagacactccgatcaagttccac
gtgctgctgacgtcctacgagctgatcactatcgatcaggccgttctgggctccatcacc
tgggcctgcctggtggtggacgaggcccaccggctgaagaacaaccagtcaaagtttttc
agaattctcaacgggtataagatctactacaagctgctgctgaccggcactccgctgcag
aacaacctggaggaactgttccacctgctcaacttcctcacgccagagcgcttcaataac
ctggagggcttcttggaggagtttgccgacatctccaaagaggaccagatcaagaagctg
cacgacctcctcgggccgcacatgctgcgccggctgaaggccgacgtgttcaagaacatg
ccggcgaagacggagctgatcgtcagggtggagctcagccccatgcagaagaaatattac
aagtttattctgacgcggaactttgaggctctgaactccaaaggtggcgggaaccaagtg
tctctgctgaacatcatgatggacctgaagaagtgctgcaaccatccctacctgttcccc
gtggccgctgtggaggctccggttttacccaacggctcttatgacggaaaccagctggtg
aagtcctcggggaaactgacgctgctccagaagatgctgaagaagctgaaggacgaagga
cacagagttctcatcttctctcagatgacgaagatgttggatctgctcgaggacttcctg
gagttcgagggttataagtacgagcgtatcgacggaggaatcaccggaggcctcagacag
gaagccatcgatcgcttcaacgcgccgggcgctcagcagttctgcttcctgctctcgacc
cgagccggaggcctcggcatcaacctggcgagcgccgacaccgtcatcatctacgactcc
gactggaatcctcacaacgacatccaggccttcagcagagctcaccgcatcggccagaac
aggaaggtgatgatctaccgcttcgtgacgcgcggctcggtggaggagcggatcactcag
gtggccaagaggaagatgatgctgacccatctggtggtgcggcccggcctgggctccaag
acgggctccatgtccaaacaggagctggacgacatcctgaagttcggcaccgaggagctg
ttcaaagacgagatcgaggcggcgcgggcggcgcgggcgatgggcgacaacaacaaagac
agcgaggagggcaacgtgatccactacgacgacgacgccatctccaagctgctggaccgc
agccaggacgccacggaggacacggagatccagaacatgaacgagtacctgagctccttc
aaggtggctcagtacgtggtgaaagaagaggacggagaggaggaggtggagcgtgagatc
atcaagcaggaggagaacgtggacccggactactgggagaagctcctgcgtcaccactac
gagcagcagcaggaggatctggctcggaacctggggaaaggcaaacgcatccggaagcag
gtcaactacaacgacaccacgcaggaggaccaagagtggcaggatgatctttcagacaat
cagtcggagtactccgtggggtccgaggacgaggacgaagatttcgaggagaggcccgaa
ggtggacgcaggcagtcgcgtcggcagctgaagaacgagagggacaaaccgctgcctccg
ctgctggctcgtgtcggagggagcatcgaggtcctcggcttcaacgctcgccagaggaaa
gcgttcctcaacgccatcatgcgctgggggatgccgccccaggacgcgttcaactcccac
tggctggtccgggacctgcgagggaagagcgagcgcgagttcagggcctacgtgtctctg
ttcatgaggcacctctgtgagccgggggccgacggagccgagaccttcgcggacggcgtc
ccgcgggaggggctgtcccgtcagcacgtcctgacccggatcggggtcatgtccctcgtc
aggaagaaggtgcaggagtttgagcacgtcaacgggaagctgagttccccggatctcatt
cccatcggaatggagctgaagaagctgacggagagcgtctcgtctgaccccaacaccccg
gtgccggccagtcccgtggccacgcagcccgggacccccgtccctccagagaaaaccgag
tgtctgtcgggaaccgccgaggacaaagagaccgcggagcccgacggcaggagagtgtca
gagcaggaaactccgggcgcggcgccggcagctgcgccggagacggcggctgacagcggc
gagagcaaggccggctcgcgggacagacccggagatgagagggacggaacccagtcgcca
tctgccaaccggagggagagcgagcggccatccagtcaaacctcccctacacccgagtcg
ggcagagaagcagagaagtcgtcagacagagcagatcgtgattctcctccggcgaaaact
gaagacagggagaataagtcagatgatgtgaagagcgaagacgcgttagaaagtcgctta
aacggagacaaagacggcgtggacgagacggacgagagcaggaaggaggacaggaacggg
ttcaaggccaggttcatgttcaatatcgcagatggaggttttacagagcttcacaccctg
tggcagacggaggagcgagcggcgatgtcctctggaaagatgcacgacatctggcaccgt
cgccacgactactggctgctggccggcatcgtcacacacggctacgctcgctggcaggac
attcagaacgacccgcgctacgccatcctcaacgagcccttcaagaccgagatgcacaag
ggcaactacctggagatgaagaacaagttcctggctcggcgcttcaagttgttggagcag
gcgctggtgatcgaggagcagctgaggcgggcggcgtacctgaacatgacccaggacgcc
agccacccggccatggctctcaacactcgcttcgccgaggtggagtgtctggccgagtcg
caccagcacctgtccaaagagtctctggccgggaacaagccggccaacgccgtgctgcac
aaaggtctccacaatagcatcagcctgctcaaccagctggaggagctcctgagcgacatg
aaggccgacgtgacccgactgcccaacatgctgtcccgcatcccgccggtgtcggcccgg
ctgcagatgtcggagcggagcatcctgagccgcctcaccagccgcggcagcgaacctccg
ccgcagcagcctttcagccccggcgcgttcggctgctcccagatgtacggcagcagcttc
gggttccgagcggcgggcggacagcccatggtgaactacagtcagatgcccatgggcccc
tacatcagtgtgtcgtctaacgggcccccgccccccacgagccacctggacaagaagtct
ctggactccctgagggacgtgggcacaccggacctcaagtcaggcaaacctagtgatgtc
atctgtatcgaggactga
DBGET
integrated database retrieval system
