KEGG   Scophthalmus maximus (turbot): 118309758
Entry
118309758         CDS       T09850                                 
Name
(RefSeq) ras-related protein rab7
  KO
K07897  Ras-related protein Rab-7A [EC:3.6.5.2]
Organism
smau  Scophthalmus maximus (turbot)
Pathway
smau04137  Mitophagy - animal
smau04140  Autophagy - animal
smau04142  Lysosome biogenesis
smau04144  Endocytosis
smau04145  Phagocytosis
smau04148  Efferocytosis
smau05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:smau00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    118309758
   04145 Phagocytosis
    118309758
   04142 Lysosome biogenesis
    118309758
   04140 Autophagy - animal
    118309758
   04137 Mitophagy - animal
    118309758
   04148 Efferocytosis
    118309758
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    118309758
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:smau04131]
    118309758
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:smau04147]
    118309758
   04031 GTP-binding proteins [BR:smau04031]
    118309758
Enzymes [BR:smau01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.2  small monomeric GTPase
     118309758
Membrane trafficking [BR:smau04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab GTPases
    118309758
 Endosome - Golgi transport
    118309758
Exosome [BR:smau04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   118309758
  Exosomal proteins of other body fluids (saliva and urine)
   118309758
  Exosomal proteins of colorectal cancer cells
   118309758
  Exosomal proteins of bladder cancer cells
   118309758
GTP-binding proteins [BR:smau04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab7/9 [OT]
    118309758
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 GTP_EFTU Gtr1_RagA RsgA_GTPase ATP_bind_1 cobW PduV-EutP nSTAND3 Septin AAA_16 NTPase_1 AAA_7 AAA_22 G-alpha AAA_5 AAA_24 NB-ARC ATPase_2 AAA_14 NACHT SRPRB ABC_tran ATP-synt_ab
Other DBs
NCBI-GeneID: 118309758
NCBI-ProteinID: XP_035488129
LinkDB
Position
6:complement(14120227..14132081)
AA seq 207 aa
MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ
IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF
VVLGNKIDLENRQVTTKRAQAWCQSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEV
ELYNEFPEPIKLDRNDRAKPSAESCSC
NT seq 624 nt   +upstreamnt  +downstreamnt
atgacatccaggaagaaagtgctcttgaaagtcatcatcctgggagattctggtgttgga
aaaacctccctgatgaaccagtatgtgaacaagaagttcagcaaccagtacaaagcgacg
ataggagcggacttcctcacgaaggaagtgatggtggatgaccgactcgttacaatgcag
atttgggacaccgctggccaggagaggttccagtccttgggtgttgcgttctaccgtgga
gcagactgctgtgtgctggtgtttgatgtgaccgcaccaaacactttcaagacacttgac
agctggagggatgagttcctgatccaggccagcccccgagatcctgagaacttccccttt
gtggtgctaggcaacaagatcgacttggagaatagacaggtaaccaccaaaagggcccag
gcttggtgtcagagtaagaacaacatcccctactttgagaccagtgccaaagaagccatt
aacgtagaacaggcattccagactattgcacgtaacgccctcaaacaggagacagaggtg
gagttgtataatgaattccctgagcccatcaaactggataggaacgacagagctaaacct
tcagcagaaagctgcagttgctga

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