Scophthalmus maximus (turbot): 118309794
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Entry
118309794 CDS
T09850
Symbol
chl1b
Name
(RefSeq) neural cell adhesion molecule L1-like protein isoform X1
KO
K06758
L1 cell adhesion molecule like protein
Organism
smau
Scophthalmus maximus (turbot)
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
smau04515
]
118309794 (chl1b)
Cell adhesion molecules [BR:
smau04515
]
Immunoglobulin superfamily
L1 family
118309794 (chl1b)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
fn3
Bravo_FIGEY
V-set
Ig_5
C2-set_2
Ig_4
C2-set_3
Ig_6
Ig_PDGFR_d4
Fn3_VIN3
HMUDK_HMUD1
Motif
Other DBs
NCBI-GeneID:
118309794
NCBI-ProteinID:
XP_047188834
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All DBs
Position
6:22396218..22462569
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AA seq
1224 aa
AA seq
DB search
MSPAFRTASSARQRHELRTQEESTRFRRTSEIYSGTMRSPRLAAALGFIACFCALYTTSA
IDIPLEVLSHVNIEQLPTITAQSPSSLIAFPFDESFPVMCEAKGNPEPEFRWTKNGLEFD
PFLDPRLMKEENSGTFVIPNNGNLTEYQGIYRCYASNKMGIAISKEIEFIVPHVPKFPKE
TLDPVMVEEGQPFILECNPPKGIPPLQIYWMTINLQHIEQDQRVSMGLNGDLYFSHAVEK
DSRRDYCCFAAFPRIRTIVQKTAMSVIVKTKKSDMSPEAANAILERRPSLLTPSGAKSET
QLVKGDDLKLECIAEGFPTPQVEWVKIGHQLPIKAKLENHGKLLIVPTVGQEDSGKYMCK
AKNRLGESVHYFTVRVEEPPEWVFEPESQLSPIGSDVLIKCSATGSPQPTVTWRVNGVRL
QDAPAANRKSFDDTIFLHNAKVSDSAVYQCEASNRHGSLLSNANIMIMNLPPMILTEEGE
EYSAVEGKGVMMHCRVFSSPPSTITWSKDDSSESVDGPRFSVHDNGSLEIYSTEKDDAGQ
YTCLAKNTEGSSAIDAMLYVKDPTRIVAAPEDQQILIGTMAQLSCLAEFDKASSNDFELL
WEKDDIEITLNYTENSRFLMEDGILQIINVSHRDQGVYTCVARTPVDQDTASALLMVLDV
PDAPDNLLLSERKSKSVKLKWSPGDDHNSSATEFVIEYEESQWEPGNWKELLRVPGNHNS
AVLKLHGHVDYCFRVSGVNTVGRGPPSEPTERYKPPPAAPDKNPENIKIEGHLPHEMDIS
WEPLLPIEHNGPGLEYRVSYRRQDMEEDWKEHVVKRHAFVVKNTPTFVPFEIKIQAKNHQ
GWGPEPKIVTGYSGEDFPSAAPDDVAVEVMNSTVVKVSWMRVHKDKLHGHLGGYRINWWR
LRSLVDSKKSHGEKHTLTFPGDRNHGTVPGLTPFSEYSLIVMTFNGRGNGPGSHPVNFKT
PEGVPEKNPVFRVTDVQKHTISLVWDPPLEPNGILTGYLLNYQLINDTEEVGPLQTVDIS
NPLTTKWSLRDLEPLSKYKVYLRSCTTVGCGPVVSEETTTTLETSKSASPTPPSTRKSPV
TKPTRSTIGLASIHAGISTQGWFIGLMSAIALLTLIVLIACFVNRNKGGKYSVKEKEDLH
PDVESQGMNDDTFCEYSDNDEKPLKGSQHSLSREIKAGDSGDSLVDYGDEDAQFNEDGSF
IGEYAGRKEKRVSAEIKATAQTPA
NT seq
3675 nt
NT seq
+upstream
nt +downstream
nt
atgtctccggcgtttcgtacagcatcttcggcgcgccagagacatgaactgaggacgcaa
gaggagagcactcgtttccggaggacttctgagatttacagtggaaccatgaggagcccg
agactggccgccgcgctgggcttcatcgcctgtttctgtgccttatatacaacttctgcc
atcgacatcccactggaggtcttaagtcatgtaaacattgagcagctgcccaccatcaca
gctcagtcgcccagctctctcatcgccttccctttcgacgagagcttcccggtgatgtgt
gaagccaaagggaatcccgagccagaattcagatggacaaagaatggcctggaatttgac
ccctttctcgacccccggctgatgaaagaagagaattctgggacctttgtgatacccaat
aatgggaaccttacagagtaccagggaatctatcgctgttacgcctcaaacaaaatgggg
atcgccatatcgaaggagattgagttcattgtgccccatgttccaaagtttcctaaagag
acgcttgatcctgtcatggtggaggaaggtcagcctttcatcttagaatgtaacccgccc
aaaggaataccacctctgcagatctactggatgactatcaatctccagcacatagaacag
gatcagagggtgtccatgggcttgaacggggacctgtacttctctcacgcggtggagaag
gacagcaggagggactactgctgcttcgccgccttcccaagaatacgaaccattgttcag
aagaccgccatgtccgtcatcgtcaagacaaaaaaaagtgacatgagtcctgaagctgct
aatgccatcctggagagaaggccttctcttctgacgccctctggtgccaaatcagagaca
cagctggtcaaaggcgatgacttgaaattggagtgtattgctgagggatttccaactcca
caggtggagtgggtgaagattggtcatcagcttcccattaaagcaaagctggagaatcac
ggaaaattactgattgttccgacagttgggcaggaagacagcgggaagtacatgtgcaag
gcgaagaaccgattaggagaaagcgtccactacttcacagtgagagtagaagagcctcca
gagtgggtgtttgagccggagagtcagctcagcccgatcggctcagacgtgctcatcaag
tgctccgccactgggtcacctcagccgacggtaacgtggagggtgaacggcgtacgcctg
caggatgccccggcagccaacaggaagtcgtttgacgacaccatctttttgcataacgcc
aaagtgtctgacagtgcggtgtatcagtgcgaggcctccaacagacatggaagcctgctg
tccaacgcaaacatcatgatcatgaatctgccccccatgattttgacggaagagggggag
gaatactctgctgtagaggggaagggagtgatgatgcactgcagggtcttcagttctcct
ccttccacaatcacctggagcaaagacgactcctctgaatcggtggacgggccgagattt
tccgttcatgacaacggatcgctggagatctacagcacagagaaagatgacgcgggacag
tacacgtgtttagctaaaaacacagagggatcgtctgctatcgacgccatgctctatgtg
aaagatcccactcgcatagtcgcggccccggaggaccaacagatcctaattggtaccatg
gcccagctctcatgcctggcagagtttgacaaggcctccagcaacgactttgagctcctg
tgggaaaaagatgatatagagataaccctcaactacactgagaattcaagattcttaatg
gaggatggtattcttcagatcatcaatgtaagccacagggaccagggtgtgtacacatgt
gtggcaagaactccagtggaccaagacacggcctcagcactgctcatggtgttagatgtc
cccgatgcacctgacaacttgctactgtctgagcgcaagagcaaaagcgtgaaactgaaa
tggagccccggggacgatcacaacagctcagccacagagtttgttatcgagtacgaggaa
agccagtgggagccgggaaactggaaggagctgctacgagtacctggaaaccacaactcg
gctgtgctcaaactccacggccacgtcgactattgcttccgcgtgtctggagttaacact
gtggggaggggccctcctagtgagcccacagagagatacaaaccccccccagcagcccct
gacaagaacccagaaaatatcaaaatcgaaggtcatttaccacatgaaatggatatcagc
tgggagcccttgttgcccattgagcacaacggccccggcctggagtacagggtgagttac
aggagacaggacatggaggaggactggaaggaacacgtggtgaagagacacgcgtttgtg
gtgaagaacacccccaccttcgttccctttgagatcaagatccaggccaagaaccaccag
ggctggggccccgagcccaagatagtgaccggctactccggcgaggactttccctctgct
gcacctgatgatgtagctgtggaggtgatgaacagcaccgtggtcaaggttagctggatg
cgcgtacacaaggacaagctacatggacatctgggaggatacaggataaactggtggcgt
ctgcgcagcctggtggactcaaagaaaagccacggagagaaacacacgctgacgttccct
ggggaccggaaccacggcacggtaccaggactaactcccttctctgagtacagcctcatt
gtcatgaccttcaacgggcggggcaacggacccggcagccatcccgtcaacttcaaaacc
ccagagggagtcccggagaaaaatcctgttttcagggtcacagatgttcagaagcacacc
atctctctggtctgggacccgccattggagcccaatgggattctcaccgggtacctcctc
aattaccagctcatcaacgacacggaggaggtggggcccctgcagacggtagacatcagc
aaccctctcaccaccaagtggtccctgcgcgacttggagcccctgagcaaatacaaggtc
taccttcgctcctgcaccacggtgggctgcgggccagttgtcagcgaggagaccaccaca
accctagaaacaagcaagtcagcttcccccacacctccaagcactcgcaagtccccagtg
accaaacccactcgctccaccataggtctggccagcatccacgcaggaatatccacccag
ggctggtttatcggcctgatgagtgccatcgctctcctcacactaattgtgttgatcgcc
tgctttgtcaacagaaataaaggagggaagtattccgtgaaagaaaaagaggaccttcac
cctgacgtggagtcccagggcatgaatgacgacacattttgtgaatacagtgacaacgac
gagaagccactgaagggcagccaacactcactgagcagagagatcaaagcgggggacagc
ggggacagcctggtggactacggcgacgaggacgcgcagttcaacgaggacggctctttt
atcggcgagtatgcgggccgaaaggagaagagggtgtccgctgagatcaaagccaccgct
cagaccccagcgtga
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